More than 300 homologs were found in PanDaTox collection
for query gene Dole_1361 on replicon NC_009943
Organism: Desulfococcus oleovorans Hxd3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009943  Dole_1361  response regulator receiver protein  100 
 
 
147 aa  291  2e-78  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1357  response regulator receiver protein  50.72 
 
 
144 aa  141  2e-33  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.48275  n/a   
 
 
-
 
NC_008554  Sfum_0618  response regulator receiver protein  53.49 
 
 
157 aa  134  5e-31  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1350  response regulator receiver protein  53.12 
 
 
147 aa  132  1.9999999999999998e-30  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00189482  n/a   
 
 
-
 
NC_013173  Dbac_2042  response regulator receiver protein  48.15 
 
 
147 aa  127  7.000000000000001e-29  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0648  response regulator receiver protein  50.38 
 
 
151 aa  126  8.000000000000001e-29  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1351  response regulator receiver protein  49.63 
 
 
141 aa  125  1.0000000000000001e-28  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000171187  n/a   
 
 
-
 
NC_008554  Sfum_0657  response regulator receiver protein  50.71 
 
 
143 aa  124  4.0000000000000003e-28  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.771795  normal 
 
 
-
 
NC_013173  Dbac_1807  response regulator receiver protein  52.94 
 
 
139 aa  120  6e-27  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0313  response regulator receiver protein  44.93 
 
 
143 aa  119  1.9999999999999998e-26  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0254543  n/a   
 
 
-
 
NC_008554  Sfum_0632  response regulator receiver protein  50.83 
 
 
135 aa  118  3e-26  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_0692  response regulator receiver domain-containing protein  42.86 
 
 
145 aa  117  4.9999999999999996e-26  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.000176776  n/a   
 
 
-
 
NC_011769  DvMF_1773  response regulator receiver sensor signal transduction histidine kinase  45.38 
 
 
408 aa  115  9.999999999999999e-26  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_2331  response regulator receiver protein  51.26 
 
 
142 aa  116  9.999999999999999e-26  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00000000425244  n/a   
 
 
-
 
NC_009943  Dole_1352  response regulator receiver protein  49.22 
 
 
139 aa  112  1.0000000000000001e-24  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00001959  n/a   
 
 
-
 
NC_008751  Dvul_0173  response regulator receiver protein  49.57 
 
 
121 aa  112  2.0000000000000002e-24  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_0403  response regulator receiver sensor signal transduction histidine kinase  44.62 
 
 
374 aa  110  6e-24  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.150899 
 
 
-
 
NC_007519  Dde_0695  response regulator receiver domain-containing protein  45.39 
 
 
141 aa  110  7.000000000000001e-24  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.396926  n/a   
 
 
-
 
NC_008554  Sfum_0654  response regulator receiver protein  41.54 
 
 
413 aa  108  2.0000000000000002e-23  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.113697  normal 
 
 
-
 
NC_011769  DvMF_1991  response regulator receiver protein  44.93 
 
 
153 aa  105  1e-22  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_0976  anti-sigma-factor antagonist  42.45 
 
 
237 aa  106  1e-22  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3572  two component, sigma-54 specific, Fis family transcriptional regulator  44.09 
 
 
457 aa  106  1e-22  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1988  response regulator receiver protein  50 
 
 
119 aa  105  2e-22  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_2272  response regulator receiver sensor signal transduction histidine kinase  48.46 
 
 
382 aa  105  2e-22  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.275022  n/a   
 
 
-
 
NC_011883  Ddes_1566  response regulator receiver protein  43.44 
 
 
126 aa  105  2e-22  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1843  two component, sigma54 specific, transcriptional regulator, Fis family  49.07 
 
 
465 aa  104  5e-22  Thauera sp. MZ1T  Bacteria  normal  0.798265  n/a   
 
 
-
 
NC_011769  DvMF_1769  response regulator receiver protein  47.86 
 
 
129 aa  103  6e-22  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_2037  response regulator receiver protein  50.46 
 
 
120 aa  103  9e-22  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2739  two component, sigma54 specific, Fis family transcriptional regulator  46.03 
 
 
451 aa  103  1e-21  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.693002  n/a   
 
 
-
 
NC_009767  Rcas_2795  two component transcriptional regulator  38.4 
 
 
266 aa  102  2e-21  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_2335  response regulator receiver protein  40.69 
 
 
411 aa  102  2e-21  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.0000388714  n/a   
 
 
-
 
NC_013173  Dbac_0314  response regulator receiver protein  46.4 
 
 
131 aa  102  2e-21  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0234873  n/a   
 
 
-
 
NC_009483  Gura_0009  multi-sensor signal transduction histidine kinase  41.98 
 
 
508 aa  102  2e-21  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0620  response regulator receiver protein  45.38 
 
 
142 aa  102  2e-21  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_0407  response regulator receiver protein  47.83 
 
 
128 aa  102  2e-21  Desulfovibrio vulgaris DP4  Bacteria  normal  0.627834  normal  0.12665 
 
 
-
 
NC_011830  Dhaf_4779  two component, sigma54 specific, transcriptional regulator, Fis family  40.5 
 
 
494 aa  101  3e-21  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE1969  sigma-54 dependent transcriptional regulator/response regulator  46.15 
 
 
473 aa  100  5e-21  Treponema denticola ATCC 35405  Bacteria  normal  0.440374  n/a   
 
 
-
 
NC_008554  Sfum_0643  two component, sigma54 specific, Fis family transcriptional regulator  40.5 
 
 
478 aa  99.8  1e-20  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_1088  two component transcriptional regulator  38.4 
 
 
264 aa  99.4  2e-20  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.237646 
 
 
-
 
NC_009012  Cthe_0583  response regulator receiver protein  42.15 
 
 
394 aa  98.2  3e-20  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0328  response regulator receiver domain-containing protein  43.48 
 
 
406 aa  98.6  3e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.918345  n/a   
 
 
-
 
NC_012918  GM21_3475  two component, sigma54 specific, transcriptional regulator, Fis family  45.95 
 
 
453 aa  98.2  3e-20  Geobacter sp. M21  Bacteria  n/a    normal  0.0804749 
 
 
-
 
NC_011146  Gbem_3413  two component, sigma54 specific, transcriptional regulator, Fis family  45.95 
 
 
453 aa  98.2  3e-20  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0327  response regulator receiver domain-containing protein  44.54 
 
 
142 aa  97.4  5e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0710  response regulator receiver domain-containing protein  41.94 
 
 
240 aa  97.4  5e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1360  response regulator receiver sensor signal transduction histidine kinase  49.11 
 
 
403 aa  97.8  5e-20  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0150  response regulator receiver protein  47.9 
 
 
134 aa  97.4  5e-20  Desulfovibrio vulgaris DP4  Bacteria  normal  0.89872  normal  0.680282 
 
 
-
 
NC_007760  Adeh_1992  two component, sigma54 specific, Fis family transcriptional regulator  39.67 
 
 
460 aa  97.4  6e-20  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1886  two component, sigma54 specific, transcriptional regulator, Fis family  39.67 
 
 
461 aa  97.4  6e-20  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2109  two component, sigma54 specific, transcriptional regulator, Fis family  40.6 
 
 
515 aa  97.4  6e-20  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_3286  two component, sigma54 specific, transcriptional regulator, Fis family  42.98 
 
 
458 aa  95.9  1e-19  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_02147  fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein  38.17 
 
 
461 aa  95.9  2e-19  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1438  two component, sigma54 specific, transcriptional regulator, Fis family  38.17 
 
 
461 aa  95.9  2e-19  Escherichia coli DH1  Bacteria  normal  0.445705  n/a   
 
 
-
 
NC_012892  B21_02106  hypothetical protein  38.17 
 
 
461 aa  95.9  2e-19  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0776  two component, sigma54 specific, Fis family transcriptional regulator  45.79 
 
 
454 aa  95.9  2e-19  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A2361  acetoacetate metabolism regulatory protein AtoC  38.17 
 
 
461 aa  95.9  2e-19  Escherichia coli HS  Bacteria  normal  0.18992  n/a   
 
 
-
 
NC_010468  EcolC_1430  acetoacetate metabolism regulatory protein AtoC  38.17 
 
 
461 aa  95.9  2e-19  Escherichia coli ATCC 8739  Bacteria  normal  0.324678  hitchhiker  0.00137179 
 
 
-
 
NC_009972  Haur_3458  multi-sensor signal transduction histidine kinase  36.55 
 
 
958 aa  95.5  2e-19  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_0410  anti-sigma-factor antagonist  40.62 
 
 
238 aa  94.7  3e-19  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.694521 
 
 
-
 
NC_007404  Tbd_0904  two component Fis family transcriptional regulator  41.38 
 
 
454 aa  95.1  3e-19  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.629928  normal 
 
 
-
 
NC_009972  Haur_2366  two component, sigma54 specific, Fis family transcriptional regulator  43.22 
 
 
385 aa  95.1  3e-19  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000342445  n/a   
 
 
-
 
NC_007760  Adeh_2009  two component, sigma54 specific, Fis family transcriptional regulator  44.74 
 
 
463 aa  95.1  3e-19  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_2369  acetoacetate metabolism regulatory protein AtoC  39.82 
 
 
461 aa  95.1  3e-19  Escherichia coli SMS-3-5  Bacteria  normal  0.0790211  normal 
 
 
-
 
NC_011883  Ddes_0816  response regulator receiver protein  41.41 
 
 
157 aa  95.1  3e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1362  response regulator receiver protein  37.78 
 
 
159 aa  94.4  4e-19  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2269  response regulator receiver protein  45.3 
 
 
130 aa  94.4  4e-19  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.740525  n/a   
 
 
-
 
NC_009767  Rcas_0593  two component transcriptional regulator  45.83 
 
 
267 aa  94.4  4e-19  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.501754 
 
 
-
 
NC_009675  Anae109_4257  two component, sigma54 specific, Fis family transcriptional regulator  48.11 
 
 
463 aa  94.7  4e-19  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_0338  response regulator receiver modulated metal dependent phosphohydrolase  37.23 
 
 
513 aa  94.4  4e-19  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.102838 
 
 
-
 
NC_011769  DvMF_0215  two component, sigma54 specific, transcriptional regulator, Fis family  49.07 
 
 
528 aa  94.4  4e-19  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0571306 
 
 
-
 
NC_008554  Sfum_3765  two component, sigma54 specific, Fis family transcriptional regulator  43.08 
 
 
463 aa  94.4  4e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  decreased coverage  0.000821276  normal 
 
 
-
 
NC_009253  Dred_2001  two component, sigma54 specific, Fis family transcriptional regulator  41.09 
 
 
454 aa  94.7  4e-19  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0962  two component, sigma54 specific, transcriptional regulator, Fis family  42.11 
 
 
458 aa  94.7  4e-19  Geobacter sp. M21  Bacteria  n/a    normal  0.277353 
 
 
-
 
NC_007519  Dde_1685  two component Fis family transcriptional regulator  47.22 
 
 
457 aa  94.4  5e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00529377  n/a   
 
 
-
 
NC_011146  Gbem_1662  response regulator receiver sensor signal transduction histidine kinase  42.98 
 
 
396 aa  94.4  5e-19  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0797  two component, sigma54 specific, transcriptional regulator, Fis family  34.78 
 
 
472 aa  94  6e-19  Rhodothermus marinus DSM 4252  Bacteria  normal  0.241811  n/a   
 
 
-
 
NC_009523  RoseRS_4161  two component transcriptional regulator  40.79 
 
 
271 aa  93.6  7e-19  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0965  putative two component, sigma54 specific, transcriptional regulator, Fis family  40.5 
 
 
462 aa  93.6  8e-19  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0008  sensory box histidine kinase/response regulator  38.85 
 
 
516 aa  93.6  9e-19  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1869  two component, sigma54 specific, transcriptional regulator, Fis family  44.25 
 
 
464 aa  93.6  9e-19  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3740  two component, sigma-54 specific, Fis family transcriptional regulator  43.69 
 
 
454 aa  93.2  9e-19  Geobacter uraniireducens Rf4  Bacteria  normal  0.0840186  n/a   
 
 
-
 
NC_002939  GSU1129  sigma-54 dependent DNA-binding response regulator  42.48 
 
 
453 aa  92.8  1e-18  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3335  two component, sigma-54 specific, Fis family transcriptional regulator  40.68 
 
 
458 aa  92.8  1e-18  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1341  response regulator receiver protein  46.09 
 
 
301 aa  92.8  1e-18  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1772  response regulator receiver protein  41.32 
 
 
151 aa  92.8  2e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013223  Dret_0887  response regulator receiver modulated metal dependent phosphohydrolase  41.6 
 
 
496 aa  92.4  2e-18  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.384329  normal 
 
 
-
 
NC_013223  Dret_0548  two component, sigma54 specific, transcriptional regulator, Fis family  44.95 
 
 
452 aa  92.4  2e-18  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.902927  normal 
 
 
-
 
NC_013223  Dret_0097  two component, sigma54 specific, transcriptional regulator, Fis family  38.46 
 
 
448 aa  92.8  2e-18  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2666  two component, sigma54 specific, transcriptional regulator, Fis family  45.28 
 
 
459 aa  91.7  3e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_1954  two component, sigma54 specific, transcriptional regulator, Fis family  44.25 
 
 
464 aa  91.7  3e-18  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.611403  n/a   
 
 
-
 
NC_009441  Fjoh_5047  two component, sigma54 specific, Fis family transcriptional regulator  40.98 
 
 
387 aa  91.7  3e-18  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0897789  n/a   
 
 
-
 
NC_008751  Dvul_1657  two component, sigma54 specific, Fis family transcriptional regulator  44.19 
 
 
459 aa  92  3e-18  Desulfovibrio vulgaris DP4  Bacteria  hitchhiker  0.000574549  normal  0.302016 
 
 
-
 
NC_013385  Adeg_0173  two component, sigma54 specific, transcriptional regulator, Fis family  42.2 
 
 
463 aa  91.7  3e-18  Ammonifex degensii KC4  Bacteria  normal  0.127235  n/a   
 
 
-
 
NC_009943  Dole_1777  two component, sigma54 specific, Fis family transcriptional regulator  38.41 
 
 
465 aa  91.3  4e-18  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3555  two component, sigma54 specific, transcriptional regulator, Fis family  45.19 
 
 
489 aa  91.3  4e-18  Anaeromyxobacter sp. K  Bacteria  normal  0.369206  n/a   
 
 
-
 
NC_011891  A2cp1_3623  two component, sigma54 specific, transcriptional regulator, Fis family  45.19 
 
 
489 aa  91.3  4e-18  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.568637  n/a   
 
 
-
 
NC_011883  Ddes_0018  response regulator receiver protein  40.87 
 
 
135 aa  91.3  4e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  decreased coverage  0.00000218096  n/a   
 
 
-
 
NC_012918  GM21_2551  response regulator receiver sensor signal transduction histidine kinase  41.23 
 
 
396 aa  91.3  4e-18  Geobacter sp. M21  Bacteria  n/a    hitchhiker  1.14529e-19 
 
 
-
 
NC_007760  Adeh_3471  two component, sigma54 specific, Fis family transcriptional regulator  45.19 
 
 
489 aa  90.9  5e-18  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_5989  two component, sigma54 specific, transcriptional regulator, Fis family  36.5 
 
 
459 aa  90.9  5e-18  Haliangium ochraceum DSM 14365  Bacteria  normal  0.999422  normal 
 
 
-
 
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