| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1129 |
|---|
| Symbol | |
|---|
| ID | 2687644 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | - |
|---|
| Start bp | 1212287 |
|---|
| End bp | 1213648 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637125798 |
|---|
| Product | sigma-54 dependent DNA-binding response regulator |
|---|
| Protein accession | NP_952182 |
|---|
| Protein GI | 39996231 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAGC GGACCAAAAT CCTCCTGATC GACGATGAAG AAACGGGACG CGAAGCCCTC
ACCCTCCTGC TGAAGGCGGC CGGTCATGCG GTGAAAAGCG CCGGGGCGGG CAGCGAGGCC
TTCCAGACCC TTACTCGCGA CACCTTCGAC ATTGTCATTA CCGACCTTTT TCTCCCCGAC
GCCAGCGGTA TCGACATCCT GAAAAAAGTC AAGGAAGACG CCCCGCTCAC CGAAGTGATC
CTCATCACCG GCCACGCCTC GGCAGAAACG GCAGTGAAGG CGATGAAAGA GGGTGCTTTC
GACTACATCA CCAAACCCCT CAACTTCGAC GAACTGAAGA TCATTATCGG CAAGGCCGTG
GAGAAGCGGC AGCTCTTGTC CGAAAACGTC TACCTCCGGA AGCAGCTGCG CGACAAGTTC
GAATTCGCCA ATATCATCGG CAGCTCTCCC GCCATGCAGC ACGTCTTCGC CCTCATGAAG
CGGATCGTCA AAACCGACTC GACCGTGCTG ATAGCCGGCG AATCGGGGAC CGGCAAAGAA
TTGGTGGCCA AGGCGATCCA CTTCAACGGC GGGCGACGCG ACAAACCGTT CATTGCCGTC
CACTGCGGGG CTATCCCGGA AAACCTGCTG GAATCGGAAC TTTTCGGCTA CGTCAAGGGT
GCGTTCACCG GTGCGATGCG GGACAAAATC GGCAAGTTCG AAGCAGCCAA CGGCGGAACC
ATCTTCCTCG ATGAAATCGG CACCATGCCG ATGCAGTTGC AGACAAAGCT CCTGCGCGTG
CTTCAGGAAG AGGAAGTGGA ACGAGTGGGC TCCACCCGCC CCGTCAAGAT CGATGTCCGG
ATCATATCGG CCACCAACCT GGATCTGGCG GAGGAGGTCA AAAAGGGCAA CTTCAGGGAA
GATCTCTTTT ACCGGCTCAA CGTGATCCCC CTGCAGCTCC CCCCCTTGAG GGAGCGGGTC
GAGGACATCC TCCCCCTGGC CAAACACTTT CTTGCCAAGT ACTGCAAGGA GATGCAGCGA
CGGAACATGT CGCTTGCCAG CGACACGCTC GAGGCACTGG AAAGCTACCA GTGGCCCGGT
AACGTGCGGG AGCTGGAGAA CGTCATGGAG CGGGTGGCGG CCCTTACCGA AGACAACACC
GTTACCGTTC AGGACCTGCC GCACAATATC CGGGAGGAGG GATTGACCCG CCTGACCGGC
AAGGGGGTCG ACCTCGTAAA GGTGCTGGCT GAAATCGAGC GGGGGATGAT CAGGGACGCG
CTGGTCCTGT CAGAGGGGGT CAAGGCTAGG GCCGCGGCGC TGCTCAACCT GAACAGGACA
ACCCTGGTGG AAAAGATGCG GCGGCTCGGC ATGCCGCTCT GA
|
|---|
| Protein sequence | MKERTKILLI DDEETGREAL TLLLKAAGHA VKSAGAGSEA FQTLTRDTFD IVITDLFLPD
ASGIDILKKV KEDAPLTEVI LITGHASAET AVKAMKEGAF DYITKPLNFD ELKIIIGKAV
EKRQLLSENV YLRKQLRDKF EFANIIGSSP AMQHVFALMK RIVKTDSTVL IAGESGTGKE
LVAKAIHFNG GRRDKPFIAV HCGAIPENLL ESELFGYVKG AFTGAMRDKI GKFEAANGGT
IFLDEIGTMP MQLQTKLLRV LQEEEVERVG STRPVKIDVR IISATNLDLA EEVKKGNFRE
DLFYRLNVIP LQLPPLRERV EDILPLAKHF LAKYCKEMQR RNMSLASDTL EALESYQWPG
NVRELENVME RVAALTEDNT VTVQDLPHNI REEGLTRLTG KGVDLVKVLA EIERGMIRDA
LVLSEGVKAR AAALLNLNRT TLVEKMRRLG MPL
|
|---|
| |