| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2666 |
|---|
| Symbol | |
|---|
| ID | 8378350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 3055970 |
|---|
| End bp | 3057349 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 645001892 |
|---|
| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
|---|
| Protein accession | YP_003159159 |
|---|
| Protein GI | 256830431 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCA TGGCGCAGGC GTCCCCGGCC ATCCCGGCGG CCAGGATTCT GGTGGTCGAC
GACGAGGTCA TCTCGCGCGA CAATCTGGCC CTGGCCCTGG CCAGGCAGGG TCACGACACG
GTGACCGCAT CAGGCGGGGC CGAGGCCCTT GGCCTTTTAC AGGATTCGGA TTTCGACATG
GTCCTGACCG ACCTGATGAT GGAAGGCATG GACGGTCTGG CCCTCTTGCG CGAGGTCAAG
TCCCGCCATC CCGACATCGA GGTCGTGGTC ATCACCGGCT ACCCCACGGT GGATACGGCG
GTGGAAGCCA TGCGGGCCGG GGCCTATGAC TATCTGGCCA AGCCGTACCG CATCGACGAG
GCCCGGCTGC TGGTGCACAA GGCGCTGGAG AAGCGGCGGC TCAAGCTGGA GGTGGCCCGG
CTGCGCGAGC AGTTGCGCGA GCGGACCCTG CCCGTACCCA TGCTCGGCGC GGCCCCGTGC
ATGGTGGAGC TCAAGCGCAC CATCGCGCAG GTCGCGCCCT CCGACGCCAC GGTGCTGATC
CTTGGGGAGA CGGGCACGGG CAAGGAAGTG GCGGCGCGCA TGGTGCACCT CTTCAGCCGT
CGCTCCGAGG CCCGTTTTCT GGCCATCAAT TGCGGGGCGT TCAACGAGGA GCTTCTTGAA
AGCGAGCTTT TCGGGCACGA GCAGGGCGCT TTTTCCGGCG CGACCCGGCA GAAGAAGGGC
CTGTTCGAGG CGGCGGAGGG CGGCACGCTC TTTCTCGACG AAGTGGGGGA GATGTCCCTG
GCCATGCAGG TCAAGCTGCT GCGCGCCGTG CAGGAACGGA CCATCCGCCG CGTCGGCGGC
ACCGCCGACA TCGCCGTGGA CGTGCGCCTT GTGGCCGCGA CCAACAAGAA CCTCAAAACC
GAGGTGGAGG CGGGCCGCTT TCGTCAGGAC CTGTATTTCC GTCTGCATGT CCTGGTGCTG
AACATGCCGC CGTTGGTGCA GCGACGGGAA GATCTGCCGC TGTTGGCCCG CTATTTCGCG
GAAAAGGCCA GCCGGGAGAC GGACCGCCCG GCTCCGGGCA TTTCCGATGA AGTGATGGAG
ATACTGAGCC GCTATGCCTT TCCGGGCAAT GTCCGCGAGC TGCAGAACGT CATCGAGCGG
GCCGTAATCT TCTGCAACGG GGATGAGATC CGCGCGGCCC ACCTTTCTCC GGAGCTGCGC
GAAGTCTCCC TGCATGTCAG CCGCGCCGGG GACAGGCAGC CCATGACTTT GGAGGAGTGC
GAGCGCGAGC AGATCCAGTG GACTCTGGAG CATGCGGCGG ACAATCGCAC CCTGGCCGCC
AAACTGCTGG GCATCGACCG GGCTTCTTTG TGGCGCAAGA TCAAGCGTCA CGGGTTGTAG
|
|---|
| Protein sequence | MSAMAQASPA IPAARILVVD DEVISRDNLA LALARQGHDT VTASGGAEAL GLLQDSDFDM
VLTDLMMEGM DGLALLREVK SRHPDIEVVV ITGYPTVDTA VEAMRAGAYD YLAKPYRIDE
ARLLVHKALE KRRLKLEVAR LREQLRERTL PVPMLGAAPC MVELKRTIAQ VAPSDATVLI
LGETGTGKEV AARMVHLFSR RSEARFLAIN CGAFNEELLE SELFGHEQGA FSGATRQKKG
LFEAAEGGTL FLDEVGEMSL AMQVKLLRAV QERTIRRVGG TADIAVDVRL VAATNKNLKT
EVEAGRFRQD LYFRLHVLVL NMPPLVQRRE DLPLLARYFA EKASRETDRP APGISDEVME
ILSRYAFPGN VRELQNVIER AVIFCNGDEI RAAHLSPELR EVSLHVSRAG DRQPMTLEEC
EREQIQWTLE HAADNRTLAA KLLGIDRASL WRKIKRHGL
|
|---|
| |