More than 300 homologs were found in PanDaTox collection
for query gene Dole_1362 on replicon NC_009943
Organism: Desulfococcus oleovorans Hxd3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009943  Dole_1362  response regulator receiver protein  100 
 
 
159 aa  321  2e-87  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1348  response regulator receiver protein  53.85 
 
 
173 aa  181  4.0000000000000006e-45  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1357  response regulator receiver protein  40.3 
 
 
144 aa  115  3e-25  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.48275  n/a   
 
 
-
 
NC_008554  Sfum_0648  response regulator receiver protein  39.84 
 
 
151 aa  111  5e-24  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1350  response regulator receiver protein  35.57 
 
 
147 aa  107  8.000000000000001e-23  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00189482  n/a   
 
 
-
 
NC_013173  Dbac_2042  response regulator receiver protein  43.09 
 
 
147 aa  106  1e-22  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1807  response regulator receiver protein  40.3 
 
 
139 aa  106  1e-22  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0632  response regulator receiver protein  39.53 
 
 
135 aa  106  1e-22  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_0173  response regulator receiver protein  43.59 
 
 
121 aa  105  3e-22  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0620  response regulator receiver protein  38.24 
 
 
142 aa  103  1e-21  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_0313  response regulator receiver protein  38.81 
 
 
143 aa  102  2e-21  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0254543  n/a   
 
 
-
 
NC_008554  Sfum_0618  response regulator receiver protein  39.68 
 
 
157 aa  102  2e-21  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_014150  Bmur_0291  two component, sigma54 specific, transcriptional regulator, Fis family  38.84 
 
 
444 aa  100  9e-21  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.00612417  n/a   
 
 
-
 
NC_008554  Sfum_0657  response regulator receiver protein  39.01 
 
 
143 aa  96.3  2e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.771795  normal 
 
 
-
 
NC_011883  Ddes_0816  response regulator receiver protein  38.52 
 
 
157 aa  94.7  4e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1361  response regulator receiver protein  37.78 
 
 
147 aa  94.4  5e-19  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_2084  sigma-54 factor interaction domain-containing protein  37.01 
 
 
477 aa  94.4  6e-19  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.327808  n/a   
 
 
-
 
NC_009943  Dole_1341  response regulator receiver protein  38.13 
 
 
301 aa  94.4  6e-19  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1843  two component, sigma54 specific, transcriptional regulator, Fis family  37.4 
 
 
465 aa  94  8e-19  Thauera sp. MZ1T  Bacteria  normal  0.798265  n/a   
 
 
-
 
NC_011769  DvMF_1769  response regulator receiver protein  36.97 
 
 
129 aa  94  8e-19  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_1347  response regulator receiver protein  35.53 
 
 
688 aa  94  8e-19  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011728  BbuZS7_0791  acetoacetate metabolism regulatory protein AtoC (Ornithine/argininedecarboxylase inhibitor)  38.33 
 
 
451 aa  94  8e-19  Borrelia burgdorferi ZS7  Bacteria  normal  0.261898  n/a   
 
 
-
 
NC_008751  Dvul_0407  response regulator receiver protein  40.52 
 
 
128 aa  94  9e-19  Desulfovibrio vulgaris DP4  Bacteria  normal  0.627834  normal  0.12665 
 
 
-
 
NC_013173  Dbac_2034  response regulator receiver protein  34.16 
 
 
300 aa  93.2  1e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2272  response regulator receiver sensor signal transduction histidine kinase  36.23 
 
 
382 aa  93.2  1e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.275022  n/a   
 
 
-
 
NC_011757  Mchl_3285  two component, sigma54 specific, transcriptional regulator, Fis family  35.16 
 
 
450 aa  92.8  2e-18  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3061  sigma-54 factor interaction domain-containing protein  35.16 
 
 
450 aa  92.8  2e-18  Methylobacterium extorquens PA1  Bacteria  normal  0.305462  normal 
 
 
-
 
NC_011901  Tgr7_1854  response regulator receiver protein  35.66 
 
 
445 aa  92.4  2e-18  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.654411  n/a   
 
 
-
 
NC_009943  Dole_1358  response regulator receiver protein  37.7 
 
 
144 aa  92.8  2e-18  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.107991  n/a   
 
 
-
 
NC_009943  Dole_2739  two component, sigma54 specific, Fis family transcriptional regulator  33.33 
 
 
451 aa  92.4  2e-18  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.693002  n/a   
 
 
-
 
NC_011769  DvMF_1988  response regulator receiver protein  40.17 
 
 
119 aa  92  3e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008554  Sfum_0656  response regulator receiver protein  36.22 
 
 
129 aa  91.7  3e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.663964  normal 
 
 
-
 
NC_008554  Sfum_3765  two component, sigma54 specific, Fis family transcriptional regulator  35 
 
 
463 aa  92  3e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  decreased coverage  0.000821276  normal 
 
 
-
 
NC_002967  TDE1969  sigma-54 dependent transcriptional regulator/response regulator  34.43 
 
 
473 aa  90.9  6e-18  Treponema denticola ATCC 35405  Bacteria  normal  0.440374  n/a   
 
 
-
 
NC_013173  Dbac_2269  response regulator receiver protein  38.6 
 
 
130 aa  90.5  7e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.740525  n/a   
 
 
-
 
NC_007404  Tbd_2771  two component Fis family transcriptional regulator  39.34 
 
 
449 aa  90.5  9e-18  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.195731 
 
 
-
 
NC_009483  Gura_3572  two component, sigma-54 specific, Fis family transcriptional regulator  33.59 
 
 
457 aa  90.1  1e-17  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0327  response regulator receiver domain-containing protein  36.97 
 
 
142 aa  90.1  1e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_3260  two component, sigma54 specific, transcriptional regulator, Fis family  31.78 
 
 
450 aa  89.7  1e-17  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0654  response regulator receiver protein  38.79 
 
 
413 aa  89.7  1e-17  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.113697  normal 
 
 
-
 
NC_009943  Dole_1352  response regulator receiver protein  36.5 
 
 
139 aa  89.4  2e-17  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00001959  n/a   
 
 
-
 
NC_013440  Hoch_4444  response regulator receiver modulated metal dependent phosphohydrolase  33.33 
 
 
526 aa  89.4  2e-17  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2037  response regulator receiver protein  37.93 
 
 
120 aa  89.4  2e-17  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01723  two-component system response regulator  37.61 
 
 
446 aa  89  3e-17  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_1394  two component, sigma54 specific, Fis family transcriptional regulator  31.78 
 
 
450 aa  88.6  3e-17  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.205793  normal  0.0550645 
 
 
-
 
NC_008554  Sfum_1934  two component, sigma54 specific, Fis family transcriptional regulator  35.34 
 
 
476 aa  88.6  3e-17  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.808753  normal  0.132653 
 
 
-
 
NC_008751  Dvul_0403  response regulator receiver sensor signal transduction histidine kinase  32.87 
 
 
374 aa  88.6  3e-17  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.150899 
 
 
-
 
NC_009708  YpsIP31758_0025  nitrogen regulation protein NR(I)  36.97 
 
 
470 aa  88.2  4e-17  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.151443  n/a   
 
 
-
 
NC_007519  Dde_0324  response regulator receiver domain-containing protein  37.5 
 
 
127 aa  88.2  4e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.581793  n/a   
 
 
-
 
NC_010465  YPK_4191  nitrogen regulation protein NR(I)  36.97 
 
 
470 aa  88.2  4e-17  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.500264  n/a   
 
 
-
 
NC_010159  YpAngola_A0027  nitrogen regulation protein NR(I)  36.97 
 
 
470 aa  88.2  4e-17  Yersinia pestis Angola  Bacteria  normal  0.307133  normal 
 
 
-
 
NC_009943  Dole_1351  response regulator receiver protein  35.61 
 
 
141 aa  87.8  6e-17  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000171187  n/a   
 
 
-
 
NC_011883  Ddes_1566  response regulator receiver protein  36.59 
 
 
126 aa  87  9e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4540  two component, sigma-54 specific, Fis family transcriptional regulator  31.25 
 
 
442 aa  86.7  1e-16  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.203781  normal  0.155775 
 
 
-
 
NC_007498  Pcar_0259  two component signal transduction response regulator  35.04 
 
 
513 aa  86.7  1e-16  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0495  two component, sigma-54 specific, Fis family transcriptional regulator  36.75 
 
 
456 aa  86.3  1e-16  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2334  response regulator receiver protein  38.66 
 
 
151 aa  86.7  1e-16  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_002939  GSU2915  sigma-54 dependent DNA-binding response regulator  35.04 
 
 
457 aa  85.9  2e-16  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0328  response regulator receiver domain-containing protein  39.84 
 
 
406 aa  86.3  2e-16  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.918345  n/a   
 
 
-
 
NC_013173  Dbac_0314  response regulator receiver protein  37.61 
 
 
131 aa  86.3  2e-16  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0234873  n/a   
 
 
-
 
NC_011146  Gbem_0283  two component, sigma54 specific, transcriptional regulator, Fis family  29.56 
 
 
456 aa  85.9  2e-16  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2331  response regulator receiver protein  31.58 
 
 
142 aa  85.5  3e-16  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00000000425244  n/a   
 
 
-
 
NC_007519  Dde_0695  response regulator receiver domain-containing protein  35 
 
 
141 aa  85.1  3e-16  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.396926  n/a   
 
 
-
 
NC_008463  PA14_72720  putative two-component response regulator  32.24 
 
 
447 aa  85.5  3e-16  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.269979  normal 
 
 
-
 
NC_011060  Ppha_1319  two component, sigma54 specific, transcriptional regulator, Fis family  35.82 
 
 
452 aa  85.5  3e-16  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0268  two component, sigma54 specific, transcriptional regulator, Fis family  35.9 
 
 
456 aa  85.5  3e-16  Geobacter sp. M21  Bacteria  n/a    normal  0.0540037 
 
 
-
 
NC_009483  Gura_3647  two component, sigma-54 specific, Fis family transcriptional regulator  36.97 
 
 
471 aa  85.1  4e-16  Geobacter uraniireducens Rf4  Bacteria  normal  0.0209004  n/a   
 
 
-
 
NC_009720  Xaut_1032  two component, sigma54 specific, Fis family transcriptional regulator  31.85 
 
 
461 aa  84.7  5e-16  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.454426 
 
 
-
 
NC_011830  Dhaf_4779  two component, sigma54 specific, transcriptional regulator, Fis family  30.2 
 
 
494 aa  84.7  5e-16  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_4770  two component, sigma54 specific, Fis family transcriptional regulator  30.99 
 
 
446 aa  84.7  5e-16  Methylobacterium sp. 4-46  Bacteria  normal  0.133057  normal  0.593625 
 
 
-
 
NC_008751  Dvul_2822  response regulator receiver protein  35.34 
 
 
135 aa  84.3  6e-16  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_0555  two component, sigma54 specific, Fis family transcriptional regulator  34.19 
 
 
457 aa  84  7e-16  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_0776  two component, sigma54 specific, Fis family transcriptional regulator  37.96 
 
 
454 aa  84.3  7e-16  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_5543  two component transcriptional regulator, Fis family  39.25 
 
 
180 aa  84  8e-16  Haliangium ochraceum DSM 14365  Bacteria  normal  0.657887  normal 
 
 
-
 
NC_011769  DvMF_1991  response regulator receiver protein  33.59 
 
 
153 aa  84  8e-16  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_2666  two component, sigma54 specific, transcriptional regulator, Fis family  34.81 
 
 
459 aa  84  9e-16  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2924  two component, sigma54 specific, Fis family transcriptional regulator  34.96 
 
 
470 aa  84  9e-16  Geobacter metallireducens GS-15  Bacteria  normal  0.777319  hitchhiker  0.0000000000564278 
 
 
-
 
NC_010814  Glov_1694  two component, sigma54 specific, transcriptional regulator, Fis family  35 
 
 
472 aa  84  9e-16  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_1884  response regulator receiver sensor signal transduction histidine kinase  34.06 
 
 
389 aa  83.6  9e-16  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.329348  normal 
 
 
-
 
NC_013501  Rmar_1797  two component, sigma54 specific, transcriptional regulator, Fis family  31.34 
 
 
461 aa  83.2  0.000000000000001  Rhodothermus marinus DSM 4252  Bacteria  normal  0.774224  n/a   
 
 
-
 
NC_002939  GSU0598  sigma-54 dependent DNA-binding response regulator  34.96 
 
 
470 aa  83.6  0.000000000000001  Geobacter sulfurreducens PCA  Bacteria  normal  0.885444  n/a   
 
 
-
 
NC_011883  Ddes_0853  two component, sigma54 specific, transcriptional regulator, Fis family  35.29 
 
 
459 aa  83.6  0.000000000000001  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.0538681  n/a   
 
 
-
 
NC_012912  Dd1591_4159  nitrogen regulation protein NR(I)  30.15 
 
 
470 aa  83.6  0.000000000000001  Dickeya zeae Ech1591  Bacteria  normal  0.086406  n/a   
 
 
-
 
NC_007963  Csal_2407  two component, sigma54 specific, Fis family transcriptional regulator  31.91 
 
 
461 aa  83.6  0.000000000000001  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0532  two component, sigma54 specific, transcriptional regulator, Fis family  33.63 
 
 
470 aa  83.6  0.000000000000001  Ammonifex degensii KC4  Bacteria  hitchhiker  0.00706375  n/a   
 
 
-
 
NC_012880  Dd703_3962  nitrogen regulation protein NR(I)  30.15 
 
 
470 aa  83.2  0.000000000000001  Dickeya dadantii Ech703  Bacteria  normal  0.389706  n/a   
 
 
-
 
NC_012918  GM21_1577  two component, sigma54 specific, transcriptional regulator, Fis family  34.69 
 
 
458 aa  83.6  0.000000000000001  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_2984  two component, sigma54 specific, transcriptional regulator, Fis family  33.62 
 
 
458 aa  82.8  0.000000000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.826768  n/a   
 
 
-
 
NC_007347  Reut_A0275  helix-turn-helix, Fis-type  29.11 
 
 
441 aa  82.4  0.000000000000002  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_6313  putative two-component response regulator  31.58 
 
 
447 aa  82.4  0.000000000000002  Pseudomonas aeruginosa PA7  Bacteria  normal  0.86051  n/a   
 
 
-
 
NC_007517  Gmet_3158  two component, sigma54 specific, Fis family transcriptional regulator  33.83 
 
 
462 aa  82.8  0.000000000000002  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_1685  two component Fis family transcriptional regulator  36.97 
 
 
457 aa  83.2  0.000000000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00529377  n/a   
 
 
-
 
NC_009832  Spro_4883  nitrogen regulation protein NR(I)  35.29 
 
 
470 aa  82.8  0.000000000000002  Serratia proteamaculans 568  Bacteria  normal  0.177074  hitchhiker  0.0000322182 
 
 
-
 
NC_013457  VEA_001012  putative two-component response regulator  33.63 
 
 
408 aa  82.8  0.000000000000002  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2658  two component, sigma54 specific, transcriptional regulator, Fis family  34.69 
 
 
458 aa  82.8  0.000000000000002  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_1657  two component, sigma54 specific, Fis family transcriptional regulator  37.29 
 
 
459 aa  82.8  0.000000000000002  Desulfovibrio vulgaris DP4  Bacteria  hitchhiker  0.000574549  normal  0.302016 
 
 
-
 
NC_008751  Dvul_2827  response regulator receiver protein  38.14 
 
 
137 aa  82.4  0.000000000000002  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3160  two component transcriptional regulator  31.41 
 
 
295 aa  82  0.000000000000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.272458  normal 
 
 
-
 
NC_012892  B21_03702  hypothetical protein  33.09 
 
 
469 aa  82  0.000000000000003  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_2541  two component, sigma54 specific, Fis family transcriptional regulator  31.01 
 
 
438 aa  82  0.000000000000003  Jannaschia sp. CCS1  Bacteria  normal  0.281957  normal  0.250281 
 
 
-
 
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