More than 300 homologs were found in PanDaTox collection
for query gene DvMF_2334 on replicon NC_011769
Organism: Desulfovibrio vulgaris str. 'Miyazaki F'



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011769  DvMF_2334  response regulator receiver protein  100 
 
 
151 aa  298  2e-80  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_2827  response regulator receiver protein  67.5 
 
 
137 aa  156  7e-38  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1358  response regulator receiver protein  51.3 
 
 
144 aa  130  6.999999999999999e-30  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.107991  n/a   
 
 
-
 
NC_009943  Dole_1357  response regulator receiver protein  48.25 
 
 
144 aa  109  1.0000000000000001e-23  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.48275  n/a   
 
 
-
 
NC_008554  Sfum_0648  response regulator receiver protein  41.98 
 
 
151 aa  108  3e-23  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1988  response regulator receiver protein  45.69 
 
 
119 aa  105  2e-22  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_1350  response regulator receiver protein  44.14 
 
 
147 aa  105  3e-22  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00189482  n/a   
 
 
-
 
NC_008751  Dvul_0173  response regulator receiver protein  46.09 
 
 
121 aa  102  2e-21  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2042  response regulator receiver protein  50 
 
 
147 aa  100  6e-21  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2822  response regulator receiver protein  47.01 
 
 
135 aa  99.8  1e-20  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_0313  response regulator receiver protein  43.59 
 
 
143 aa  99  2e-20  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0254543  n/a   
 
 
-
 
NC_013173  Dbac_0314  response regulator receiver protein  45.69 
 
 
131 aa  98.6  3e-20  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0234873  n/a   
 
 
-
 
NC_011830  Dhaf_4779  two component, sigma54 specific, transcriptional regulator, Fis family  39.13 
 
 
494 aa  97.8  4e-20  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A2804  transcriptional regulatory protein ZraR  40.65 
 
 
445 aa  97.4  6e-20  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A2763  transcriptional regulator ZraR  40.65 
 
 
445 aa  97.4  7e-20  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C2825  transcriptional regulator ZraR  40.65 
 
 
445 aa  97.4  7e-20  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.479389  normal 
 
 
-
 
NC_011205  SeD_A2938  transcriptional regulator ZraR  40.65 
 
 
445 aa  97.4  7e-20  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B2721  sigma-54 dependent transcriptional regulator/response regulator  40.65 
 
 
445 aa  97.1  7e-20  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1829  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  47.01 
 
 
357 aa  95.9  1e-19  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1341  response regulator receiver protein  42.5 
 
 
301 aa  96.3  1e-19  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1843  two component, sigma54 specific, transcriptional regulator, Fis family  43.22 
 
 
465 aa  96.3  1e-19  Thauera sp. MZ1T  Bacteria  normal  0.798265  n/a   
 
 
-
 
NC_011883  Ddes_0018  response regulator receiver protein  42.98 
 
 
135 aa  96.7  1e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  decreased coverage  0.00000218096  n/a   
 
 
-
 
NC_011891  A2cp1_2101  response regulator receiver modulated metal dependent phosphohydrolase  47.01 
 
 
357 aa  95.9  2e-19  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0816  response regulator receiver protein  43.48 
 
 
157 aa  95.5  2e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1991  response regulator receiver protein  45.04 
 
 
153 aa  95.9  2e-19  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_1351  response regulator receiver protein  44.83 
 
 
141 aa  95.5  2e-19  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000171187  n/a   
 
 
-
 
NC_008554  Sfum_0632  response regulator receiver protein  42.74 
 
 
135 aa  95.9  2e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_2031  response regulator receiver modulated metal dependent phosphohydrolase  47.01 
 
 
357 aa  95.9  2e-19  Anaeromyxobacter sp. K  Bacteria  normal  0.306573  n/a   
 
 
-
 
NC_013173  Dbac_1807  response regulator receiver protein  44.25 
 
 
139 aa  95.1  3e-19  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2346  response regulator receiver protein  46.09 
 
 
136 aa  94  6e-19  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007519  Dde_0324  response regulator receiver domain-containing protein  44.44 
 
 
127 aa  94  7e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.581793  n/a   
 
 
-
 
NC_008554  Sfum_0618  response regulator receiver protein  40.98 
 
 
157 aa  94  7e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_1991  response regulator receiver modulated metal dependent phosphohydrolase  43.9 
 
 
357 aa  92.8  1e-18  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0620  response regulator receiver protein  42.74 
 
 
142 aa  93.2  1e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_3049  putative two component, sigma54 specific, transcriptional regulator, Fis family  40.83 
 
 
445 aa  93.2  1e-18  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0403  response regulator receiver sensor signal transduction histidine kinase  46.79 
 
 
374 aa  92.8  1e-18  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.150899 
 
 
-
 
NC_013173  Dbac_2037  response regulator receiver protein  43.93 
 
 
120 aa  93.2  1e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_1797  two component, sigma54 specific, transcriptional regulator, Fis family  41.03 
 
 
461 aa  92.4  2e-18  Rhodothermus marinus DSM 4252  Bacteria  normal  0.774224  n/a   
 
 
-
 
NC_009436  Ent638_3039  two component, sigma54 specific, Fis family transcriptional regulator  38.58 
 
 
445 aa  92.4  2e-18  Enterobacter sp. 638  Bacteria  normal  0.992832  normal  0.337936 
 
 
-
 
NC_008751  Dvul_0836  two component, sigma54 specific, Fis family transcriptional regulator  40.52 
 
 
469 aa  92  2e-18  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.0464248 
 
 
-
 
NC_011883  Ddes_1566  response regulator receiver protein  42.62 
 
 
126 aa  92  3e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1994  two component signal transduction response regulator  40.54 
 
 
477 aa  91.7  3e-18  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_0717  two component, sigma54 specific, Fis family transcriptional regulator  41.8 
 
 
466 aa  92  3e-18  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1226  putative two component, sigma54 specific, transcriptional regulator, Fis family  40 
 
 
445 aa  91.7  3e-18  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2107  response regulator receiver protein  40.83 
 
 
768 aa  91.3  4e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008554  Sfum_0636  response regulator receiver protein  44.07 
 
 
124 aa  91.3  4e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.621219  normal 
 
 
-
 
NC_014148  Plim_2084  sigma-54 factor interaction domain-containing protein  38.26 
 
 
477 aa  90.1  1e-17  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.327808  n/a   
 
 
-
 
NC_012880  Dd703_2768  putative two component, sigma54 specific, transcriptional regulator, Fis family  39.17 
 
 
445 aa  89.7  1e-17  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_5047  two component, sigma54 specific, Fis family transcriptional regulator  37.82 
 
 
387 aa  90.1  1e-17  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0897789  n/a   
 
 
-
 
NC_009675  Anae109_3404  two component, sigma54 specific, Fis family transcriptional regulator  40.87 
 
 
455 aa  89.7  1e-17  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.235439  normal  0.675632 
 
 
-
 
NC_008751  Dvul_2709  response regulator receiver sensor signal transduction histidine kinase  46.09 
 
 
501 aa  89.7  1e-17  Desulfovibrio vulgaris DP4  Bacteria  normal  0.710197  normal  0.745824 
 
 
-
 
NC_009943  Dole_2331  response regulator receiver protein  38.6 
 
 
142 aa  89.4  2e-17  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00000000425244  n/a   
 
 
-
 
NC_009523  RoseRS_1088  two component transcriptional regulator  42.61 
 
 
264 aa  89.4  2e-17  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.237646 
 
 
-
 
NC_007517  Gmet_2453  two component, sigma54 specific, Fis family transcriptional regulator  42.24 
 
 
461 aa  89  2e-17  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000196128  normal 
 
 
-
 
NC_007519  Dde_0321  response regulator receiver domain-containing protein  40.34 
 
 
122 aa  89  2e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_3651  two component, sigma54 specific, Fis family transcriptional regulator  38.58 
 
 
445 aa  89  2e-17  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_3819  two component, sigma54 specific, transcriptional regulator, Fis family  39.66 
 
 
455 aa  89  2e-17  Geobacter bemidjiensis Bem  Bacteria  normal  0.785821  n/a   
 
 
-
 
NC_012912  Dd1591_1085  putative two component, sigma54 specific, transcriptional regulator, Fis family  38.33 
 
 
445 aa  88.6  2e-17  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1259  two component, sigma54 specific, Fis family transcriptional regulator  39.02 
 
 
445 aa  88.6  3e-17  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3903  two component, sigma54 specific, transcriptional regulator, Fis family  39.66 
 
 
455 aa  88.6  3e-17  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000574971 
 
 
-
 
NC_010159  YpAngola_A3629  two-component system response regulator  39.02 
 
 
445 aa  88.6  3e-17  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2741  two component, sigma54 specific, Fis family transcriptional regulator  42.74 
 
 
474 aa  88.6  3e-17  Rhodoferax ferrireducens T118  Bacteria  normal  0.0363909  n/a   
 
 
-
 
NC_009708  YpsIP31758_1152  sigma-54 dependent DNA-binding response regulator  39.02 
 
 
445 aa  88.6  3e-17  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_2795  two component transcriptional regulator  41.74 
 
 
266 aa  88.6  3e-17  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_0097  two component, sigma54 specific, transcriptional regulator, Fis family  34.75 
 
 
448 aa  88.2  4e-17  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_0092  response regulator receiver protein  40.83 
 
 
682 aa  88.2  4e-17  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_2366  two component, sigma54 specific, Fis family transcriptional regulator  40.34 
 
 
385 aa  87.8  5e-17  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000342445  n/a   
 
 
-
 
NC_007760  Adeh_0504  two component, sigma54 specific, Fis family transcriptional regulator  45.13 
 
 
443 aa  87.8  5e-17  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0332  two component, sigma54 specific, transcriptional regulator, Fis family  38.46 
 
 
469 aa  87.4  6e-17  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.465248 
 
 
-
 
CP001509  ECD_02446  predicted DNA-binding response regulator in two-component system  41.46 
 
 
444 aa  87.4  7e-17  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1114  putative two component, sigma54 specific, transcriptional regulator, Fis family  41.46 
 
 
444 aa  87.4  7e-17  Escherichia coli DH1  Bacteria  normal  0.922386  n/a   
 
 
-
 
NC_010658  SbBS512_E2919  sigma-54 dependent response regulator  41.46 
 
 
444 aa  87.4  7e-17  Shigella boydii CDC 3083-94  Bacteria  normal  0.70731  n/a   
 
 
-
 
NC_011769  DvMF_1772  response regulator receiver protein  42.74 
 
 
151 aa  87  7e-17  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_012892  B21_02410  hypothetical protein  41.46 
 
 
444 aa  87.4  7e-17  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A2707  sigma-54 dependent response regulator  41.46 
 
 
444 aa  87.4  7e-17  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_1123  two component, sigma54 specific, Fis family transcriptional regulator  41.46 
 
 
444 aa  87.4  7e-17  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_011353  ECH74115_3788  sigma-54 dependent response regulator  41.46 
 
 
444 aa  87.4  7e-17  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_2839  sigma-54 dependent response regulator  41.46 
 
 
444 aa  87.4  7e-17  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_2707  sigma-54 dependent response regulator  41.46 
 
 
444 aa  87.4  7e-17  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_0407  response regulator receiver protein  41.13 
 
 
128 aa  87.4  7e-17  Desulfovibrio vulgaris DP4  Bacteria  normal  0.627834  normal  0.12665 
 
 
-
 
NC_010730  SYO3AOP1_1480  two component transcriptional regulator, winged helix family  36.75 
 
 
219 aa  87.4  7e-17  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.000000000681553  n/a   
 
 
-
 
NC_010814  Glov_2786  two component, sigma54 specific, transcriptional regulator, Fis family  36.84 
 
 
480 aa  87  8e-17  Geobacter lovleyi SZ  Bacteria  normal  0.543097  n/a   
 
 
-
 
NC_009483  Gura_0495  two component, sigma-54 specific, Fis family transcriptional regulator  39.13 
 
 
456 aa  87  8e-17  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0633  response regulator receiver protein  39.02 
 
 
133 aa  87  8e-17  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.546392  normal 
 
 
-
 
NC_009675  Anae109_4152  two component, sigma54 specific, Fis family transcriptional regulator  35.77 
 
 
480 aa  87  9e-17  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.038607 
 
 
-
 
NC_007519  Dde_3536  two component Fis family transcriptional regulator  33.62 
 
 
447 aa  86.7  9e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1495  sigma-54 dependent DNA-binding response regulator  39.83 
 
 
458 aa  86.3  1e-16  Geobacter sulfurreducens PCA  Bacteria  normal  0.301103  n/a   
 
 
-
 
NC_009943  Dole_2333  response regulator receiver protein  38.98 
 
 
117 aa  86.7  1e-16  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.0000000530573  n/a   
 
 
-
 
NC_009943  Dole_1362  response regulator receiver protein  38.66 
 
 
159 aa  86.7  1e-16  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_0537  two component, sigma54 specific, transcriptional regulator, Fis family  44.25 
 
 
446 aa  86.3  1e-16  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0695  response regulator receiver domain-containing protein  39.5 
 
 
141 aa  86.3  1e-16  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.396926  n/a   
 
 
-
 
NC_011831  Cagg_1830  response regulator receiver modulated diguanylate cyclase  37.24 
 
 
941 aa  86.7  1e-16  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_6438  putative two component, sigma54 specific, transcriptional regulator, Fis family  33.62 
 
 
394 aa  86.3  1e-16  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.00615091  normal  0.383003 
 
 
-
 
NC_009972  Haur_3458  multi-sensor signal transduction histidine kinase  38.66 
 
 
958 aa  86.7  1e-16  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1348  response regulator receiver protein  41.28 
 
 
173 aa  86.3  1e-16  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2109  two component, sigma54 specific, transcriptional regulator, Fis family  39.42 
 
 
515 aa  86.7  1e-16  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013515  Smon_1490  two component transcriptional regulator, winged helix family  38.89 
 
 
225 aa  86.3  1e-16  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_011891  A2cp1_0533  two component, sigma54 specific, transcriptional regulator, Fis family  44.25 
 
 
443 aa  86.7  1e-16  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.141325  n/a   
 
 
-
 
NC_011769  DvMF_1769  response regulator receiver protein  40.32 
 
 
129 aa  85.9  2e-16  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009675  Anae109_3581  two component, sigma54 specific, Fis family transcriptional regulator  39.68 
 
 
490 aa  85.9  2e-16  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.0374719 
 
 
-
 
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