Gene Sfum_0648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0648 
Symbol 
ID4460409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp778234 
End bp778689 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content57% 
IMG OID639701404 
Productresponse regulator receiver protein 
Protein accessionYP_844782 
Protein GI116748095 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAATGGC CCAGAATGGA GGAGGGGATT TCCGTGGACT CGTTTCGTGT CCTGCTGGTC 
GATGATGAGA AGGATTTCCT GGAAACGCTG GTCAAGAGGC TCCGGAAGCG CAACCTGGCA
GTGGATGCCG TGACCAGTGG AGAAGAGGCC CTCGAGGTCC TCAAGGAAGC GCCTGCGGAC
GTCGTGGTCC TGGATGTGCG AATGCCGGGC ATGAGCGGAT TGGAAACCCT CAGGGAAATC
AAGAAGCAGT ATCCTGTCAT CGAGATCATC ATGCTCACGG GGCACGCGAA CATGGAGGTG
GCGATTGAAG GAATGGAACT GGGCGCCTTC GACTACCTGC TCAAGCCCAT GGACATCGAC
GAGCTCCTGT ATAAGCTGCA GGATGCCTAC AAGAAAAAGA GTCTGCACCA GCGGCGTGCG
GAACAAGTCG TCGAGAAGGT CTCGACCCGG AAGTAG
 
Protein sequence
MKWPRMEEGI SVDSFRVLLV DDEKDFLETL VKRLRKRNLA VDAVTSGEEA LEVLKEAPAD 
VVVLDVRMPG MSGLETLREI KKQYPVIEII MLTGHANMEV AIEGMELGAF DYLLKPMDID
ELLYKLQDAY KKKSLHQRRA EQVVEKVSTR K