More than 300 homologs were found in PanDaTox collection
for query gene Sfum_0654 on replicon NC_008554
Organism: Syntrophobacter fumaroxidans MPOB



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008554  Sfum_0654  response regulator receiver protein  100 
 
 
413 aa  833    Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.113697  normal 
 
 
-
 
NC_009943  Dole_2335  response regulator receiver protein  52.06 
 
 
411 aa  408  1e-113  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.0000388714  n/a   
 
 
-
 
NC_007519  Dde_0328  response regulator receiver domain-containing protein  43.42 
 
 
406 aa  331  1e-89  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.918345  n/a   
 
 
-
 
NC_009943  Dole_2398  response regulator receiver protein  34.65 
 
 
271 aa  143  5e-33  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0404  response regulator receiver protein  60.17 
 
 
151 aa  143  6e-33  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.134088 
 
 
-
 
NC_011769  DvMF_1772  response regulator receiver protein  60.17 
 
 
151 aa  142  8e-33  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_1509  response regulator receiver protein  33.83 
 
 
278 aa  134  3.9999999999999996e-30  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00063151  n/a   
 
 
-
 
NC_008554  Sfum_0656  response regulator receiver protein  56.9 
 
 
129 aa  133  6.999999999999999e-30  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.663964  normal 
 
 
-
 
NC_011883  Ddes_0816  response regulator receiver protein  56.41 
 
 
157 aa  130  5.0000000000000004e-29  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2271  response regulator receiver protein  47.41 
 
 
127 aa  122  9.999999999999999e-27  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.420434  n/a   
 
 
-
 
NC_008751  Dvul_0407  response regulator receiver protein  56.14 
 
 
128 aa  121  3e-26  Desulfovibrio vulgaris DP4  Bacteria  normal  0.627834  normal  0.12665 
 
 
-
 
NC_011769  DvMF_1769  response regulator receiver protein  55.17 
 
 
129 aa  121  3e-26  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_2269  response regulator receiver protein  51.75 
 
 
130 aa  118  1.9999999999999998e-25  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.740525  n/a   
 
 
-
 
NC_008554  Sfum_0648  response regulator receiver protein  48.72 
 
 
151 aa  118  1.9999999999999998e-25  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_0324  response regulator receiver domain-containing protein  52.73 
 
 
127 aa  115  2.0000000000000002e-24  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.581793  n/a   
 
 
-
 
NC_013173  Dbac_1807  response regulator receiver protein  47.2 
 
 
139 aa  114  4.0000000000000004e-24  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2331  response regulator receiver protein  45.31 
 
 
142 aa  110  3e-23  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00000000425244  n/a   
 
 
-
 
NC_007519  Dde_0321  response regulator receiver domain-containing protein  51.75 
 
 
122 aa  110  5e-23  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1361  response regulator receiver protein  41.54 
 
 
147 aa  108  1e-22  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0632  response regulator receiver protein  43.85 
 
 
135 aa  104  3e-21  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011883  Ddes_0814  response regulator receiver protein  44.35 
 
 
132 aa  102  2e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1350  response regulator receiver protein  41.88 
 
 
147 aa  101  3e-20  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00189482  n/a   
 
 
-
 
NC_013173  Dbac_2037  response regulator receiver protein  42.11 
 
 
120 aa  101  3e-20  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1357  response regulator receiver protein  43.55 
 
 
144 aa  100  4e-20  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.48275  n/a   
 
 
-
 
NC_011769  DvMF_1991  response regulator receiver protein  43.9 
 
 
153 aa  100  5e-20  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_0403  response regulator receiver sensor signal transduction histidine kinase  45.38 
 
 
374 aa  99.8  9e-20  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.150899 
 
 
-
 
NC_007519  Dde_0327  response regulator receiver domain-containing protein  42.42 
 
 
142 aa  98.6  2e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0652  response regulator receiver protein  44.14 
 
 
122 aa  97.8  3e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.429078  normal 
 
 
-
 
NC_009943  Dole_1348  response regulator receiver protein  42.24 
 
 
173 aa  97.4  4e-19  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1352  response regulator receiver protein  41.73 
 
 
139 aa  95.5  1e-18  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00001959  n/a   
 
 
-
 
NC_008751  Dvul_0173  response regulator receiver protein  44.83 
 
 
121 aa  95.1  2e-18  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1360  response regulator receiver sensor signal transduction histidine kinase  42.86 
 
 
403 aa  94  4e-18  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0313  response regulator receiver protein  43.7 
 
 
143 aa  94.4  4e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0254543  n/a   
 
 
-
 
NC_011883  Ddes_1566  response regulator receiver protein  42.62 
 
 
126 aa  93.2  7e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2272  response regulator receiver sensor signal transduction histidine kinase  41.6 
 
 
382 aa  93.2  9e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.275022  n/a   
 
 
-
 
NC_011769  DvMF_1773  response regulator receiver sensor signal transduction histidine kinase  42.75 
 
 
408 aa  91.7  2e-17  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008554  Sfum_0618  response regulator receiver protein  40.35 
 
 
157 aa  92  2e-17  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_0314  response regulator receiver protein  37.8 
 
 
131 aa  90.5  5e-17  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0234873  n/a   
 
 
-
 
NC_013173  Dbac_0976  anti-sigma-factor antagonist  34.13 
 
 
237 aa  90.5  5e-17  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1351  response regulator receiver protein  40.16 
 
 
141 aa  90.1  6e-17  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000171187  n/a   
 
 
-
 
NC_009943  Dole_1362  response regulator receiver protein  38.79 
 
 
159 aa  89.7  9e-17  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1988  response regulator receiver protein  42.24 
 
 
119 aa  89  1e-16  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_2042  response regulator receiver protein  38.71 
 
 
147 aa  89  1e-16  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2739  two component, sigma54 specific, Fis family transcriptional regulator  34.96 
 
 
451 aa  88.2  2e-16  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.693002  n/a   
 
 
-
 
NC_009523  RoseRS_0338  response regulator receiver modulated metal dependent phosphohydrolase  32.31 
 
 
513 aa  88.6  2e-16  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.102838 
 
 
-
 
NC_008554  Sfum_0636  response regulator receiver protein  46.49 
 
 
124 aa  87.4  4e-16  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.621219  normal 
 
 
-
 
NC_008554  Sfum_1934  two component, sigma54 specific, Fis family transcriptional regulator  38.6 
 
 
476 aa  87.4  4e-16  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.808753  normal  0.132653 
 
 
-
 
NC_013173  Dbac_2034  response regulator receiver protein  35.48 
 
 
300 aa  87  5e-16  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_2552  two component transcriptional regulator, winged helix family  38.46 
 
 
230 aa  87  5e-16  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.0000276879  normal  0.180215 
 
 
-
 
NC_009943  Dole_1341  response regulator receiver protein  38.21 
 
 
301 aa  87  5e-16  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0150  response regulator receiver protein  42.31 
 
 
134 aa  87  5e-16  Desulfovibrio vulgaris DP4  Bacteria  normal  0.89872  normal  0.680282 
 
 
-
 
NC_009483  Gura_0495  two component, sigma-54 specific, Fis family transcriptional regulator  38.26 
 
 
456 aa  87  6e-16  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2039  two component, sigma54 specific, Fis family transcriptional regulator  39.34 
 
 
476 aa  86.7  7e-16  Desulfovibrio vulgaris DP4  Bacteria  normal  0.238588  normal 
 
 
-
 
NC_009675  Anae109_3404  two component, sigma54 specific, Fis family transcriptional regulator  38.24 
 
 
455 aa  85.9  0.000000000000001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.235439  normal  0.675632 
 
 
-
 
NC_011145  AnaeK_1886  two component, sigma54 specific, transcriptional regulator, Fis family  33.33 
 
 
461 aa  86.3  0.000000000000001  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_1797  two component, sigma54 specific, transcriptional regulator, Fis family  40 
 
 
461 aa  86.3  0.000000000000001  Rhodothermus marinus DSM 4252  Bacteria  normal  0.774224  n/a   
 
 
-
 
NC_013173  Dbac_2273  response regulator receiver protein  35.9 
 
 
139 aa  85.1  0.000000000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.103597  n/a   
 
 
-
 
NC_009943  Dole_1358  response regulator receiver protein  41.74 
 
 
144 aa  85.1  0.000000000000002  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.107991  n/a   
 
 
-
 
NC_007760  Adeh_1992  two component, sigma54 specific, Fis family transcriptional regulator  33.33 
 
 
460 aa  84.7  0.000000000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0018  response regulator receiver protein  35.29 
 
 
135 aa  84  0.000000000000004  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  decreased coverage  0.00000218096  n/a   
 
 
-
 
NC_013205  Aaci_2784  response regulator receiver protein  38.39 
 
 
125 aa  83.6  0.000000000000006  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.0945133  n/a   
 
 
-
 
NC_011830  Dhaf_3481  sporulation transcriptional activator Spo0A  36.75 
 
 
272 aa  83.2  0.000000000000007  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0151287  n/a   
 
 
-
 
NC_008751  Dvul_2827  response regulator receiver protein  38.76 
 
 
137 aa  83.2  0.000000000000007  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_3715  multi-sensor signal transduction histidine kinase  36.75 
 
 
653 aa  83.2  0.000000000000007  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3334  response regulator receiver protein  36.28 
 
 
120 aa  83.2  0.000000000000007  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0694  response regulator receiver domain-containing protein  43.1 
 
 
129 aa  83.2  0.000000000000008  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.112111  n/a   
 
 
-
 
NC_011898  Ccel_2113  two component transcriptional regulator, AraC family  34.65 
 
 
538 aa  82.8  0.000000000000009  Clostridium cellulolyticum H10  Bacteria  normal  0.141697  n/a   
 
 
-
 
NC_002939  GSU2915  sigma-54 dependent DNA-binding response regulator  31.39 
 
 
457 aa  82.8  0.00000000000001  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3572  two component, sigma-54 specific, Fis family transcriptional regulator  38.14 
 
 
457 aa  82.8  0.00000000000001  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1223  anti-sigma-factor antagonist  35.2 
 
 
271 aa  82.4  0.00000000000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.068542 
 
 
-
 
NC_007802  Jann_2541  two component, sigma54 specific, Fis family transcriptional regulator  35.9 
 
 
438 aa  82.4  0.00000000000001  Jannaschia sp. CCS1  Bacteria  normal  0.281957  normal  0.250281 
 
 
-
 
NC_011769  DvMF_2549  response regulator receiver sensor signal transduction histidine kinase  42.24 
 
 
446 aa  82.8  0.00000000000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011769  DvMF_2334  response regulator receiver protein  40.17 
 
 
151 aa  82.8  0.00000000000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_2035  response regulator receiver protein  36.97 
 
 
129 aa  82.8  0.00000000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2255  two component transcriptional regulator, Fis family  40.74 
 
 
185 aa  81.6  0.00000000000002  Anaeromyxobacter sp. K  Bacteria  normal  0.0449716  n/a   
 
 
-
 
NC_011891  A2cp1_2343  two component transcriptional regulator, Fis family  40.74 
 
 
185 aa  81.6  0.00000000000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.888574  n/a   
 
 
-
 
NC_007498  Pcar_2345  two component signal transduction response regulator  33.91 
 
 
455 aa  81.6  0.00000000000002  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00459366  n/a   
 
 
-
 
NC_007517  Gmet_0555  two component, sigma54 specific, Fis family transcriptional regulator  33.91 
 
 
457 aa  81.6  0.00000000000002  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_3286  two component, sigma54 specific, transcriptional regulator, Fis family  36.28 
 
 
458 aa  81.6  0.00000000000002  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1607  two component Fis family transcriptional regulator  40.74 
 
 
185 aa  81.6  0.00000000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.016434  n/a   
 
 
-
 
NC_008554  Sfum_0620  response regulator receiver protein  37.98 
 
 
142 aa  81.6  0.00000000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2737  response regulator receiver domain-containing protein  37.82 
 
 
139 aa  81.6  0.00000000000003  Rhodoferax ferrireducens T118  Bacteria  hitchhiker  0.00154696  n/a   
 
 
-
 
NC_008751  Dvul_2371  response regulator receiver protein  34.71 
 
 
233 aa  81.3  0.00000000000003  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_2865  response regulator receiver protein  36.44 
 
 
264 aa  81.3  0.00000000000003  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1847  two component, sigma54 specific, Fis family transcriptional regulator  33.33 
 
 
459 aa  80.5  0.00000000000004  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.122843  normal  0.436579 
 
 
-
 
NC_008554  Sfum_0828  multi-sensor signal transduction histidine kinase  35.25 
 
 
567 aa  80.9  0.00000000000004  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_0710  two component, sigma54 specific, Fis family transcriptional regulator  35.65 
 
 
456 aa  80.9  0.00000000000004  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2333  response regulator receiver protein  39.47 
 
 
117 aa  80.5  0.00000000000005  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.0000000530573  n/a   
 
 
-
 
NC_013456  VEA_001908  nitrogen regulation protein NR(I)  34.38 
 
 
467 aa  80.5  0.00000000000005  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0695  response regulator receiver domain-containing protein  39.5 
 
 
141 aa  80.5  0.00000000000005  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.396926  n/a   
 
 
-
 
NC_009483  Gura_3740  two component, sigma-54 specific, Fis family transcriptional regulator  38.26 
 
 
454 aa  80.5  0.00000000000005  Geobacter uraniireducens Rf4  Bacteria  normal  0.0840186  n/a   
 
 
-
 
NC_008554  Sfum_3765  two component, sigma54 specific, Fis family transcriptional regulator  37.9 
 
 
463 aa  80.5  0.00000000000005  Syntrophobacter fumaroxidans MPOB  Bacteria  decreased coverage  0.000821276  normal 
 
 
-
 
NC_012918  GM21_0962  two component, sigma54 specific, transcriptional regulator, Fis family  35.4 
 
 
458 aa  80.5  0.00000000000005  Geobacter sp. M21  Bacteria  n/a    normal  0.277353 
 
 
-
 
NC_008687  Pden_4127  two component, sigma54 specific, Fis family transcriptional regulator  33.82 
 
 
462 aa  80.5  0.00000000000005  Paracoccus denitrificans PD1222  Bacteria  normal  0.142345  normal  0.982236 
 
 
-
 
NC_011898  Ccel_1228  two component transcriptional regulator, AraC family  35.61 
 
 
532 aa  80.5  0.00000000000006  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1114  response regulator receiver modulated serine phosphatase  32.09 
 
 
391 aa  80.5  0.00000000000006  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0633  response regulator receiver protein  36.75 
 
 
133 aa  80.5  0.00000000000006  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.546392  normal 
 
 
-
 
NC_002939  GSU0372  sigma-54 dependent DNA-binding response regulator  36.07 
 
 
461 aa  80.1  0.00000000000007  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3444  response regulator receiver protein  34.51 
 
 
120 aa  79.7  0.00000000000008  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012918  GM21_3475  two component, sigma54 specific, transcriptional regulator, Fis family  37.82 
 
 
453 aa  79.7  0.00000000000009  Geobacter sp. M21  Bacteria  n/a    normal  0.0804749 
 
 
-
 
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