More than 300 homologs were found in PanDaTox collection
for query gene Sfum_0648 on replicon NC_008554
Organism: Syntrophobacter fumaroxidans MPOB



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008554  Sfum_0648  response regulator receiver protein  100 
 
 
151 aa  302  1.0000000000000001e-81  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_1807  response regulator receiver protein  58.59 
 
 
139 aa  163  9e-40  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0618  response regulator receiver protein  56.06 
 
 
157 aa  158  2e-38  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1357  response regulator receiver protein  57.66 
 
 
144 aa  155  2e-37  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.48275  n/a   
 
 
-
 
NC_011769  DvMF_1991  response regulator receiver protein  56.8 
 
 
153 aa  146  8e-35  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_1352  response regulator receiver protein  55.04 
 
 
139 aa  144  3e-34  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00001959  n/a   
 
 
-
 
NC_013173  Dbac_0314  response regulator receiver protein  53.6 
 
 
131 aa  137  3.9999999999999997e-32  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0234873  n/a   
 
 
-
 
NC_009943  Dole_1350  response regulator receiver protein  49.21 
 
 
147 aa  136  1e-31  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00189482  n/a   
 
 
-
 
NC_008751  Dvul_0173  response regulator receiver protein  51.28 
 
 
121 aa  127  5.0000000000000004e-29  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1361  response regulator receiver protein  50.38 
 
 
147 aa  126  8.000000000000001e-29  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2042  response regulator receiver protein  48.48 
 
 
147 aa  126  1.0000000000000001e-28  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0313  response regulator receiver protein  47.45 
 
 
143 aa  125  2.0000000000000002e-28  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0254543  n/a   
 
 
-
 
NC_011769  DvMF_1988  response regulator receiver protein  49.57 
 
 
119 aa  125  2.0000000000000002e-28  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011769  DvMF_1769  response regulator receiver protein  49.57 
 
 
129 aa  122  1e-27  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008554  Sfum_0632  response regulator receiver protein  46.72 
 
 
135 aa  122  1e-27  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011883  Ddes_1566  response regulator receiver protein  48.39 
 
 
126 aa  123  1e-27  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0692  response regulator receiver domain-containing protein  48.48 
 
 
145 aa  122  2e-27  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.000176776  n/a   
 
 
-
 
NC_008751  Dvul_0150  response regulator receiver protein  51.54 
 
 
134 aa  120  4e-27  Desulfovibrio vulgaris DP4  Bacteria  normal  0.89872  normal  0.680282 
 
 
-
 
NC_009943  Dole_1351  response regulator receiver protein  47.15 
 
 
141 aa  120  7e-27  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000171187  n/a   
 
 
-
 
NC_013173  Dbac_2037  response regulator receiver protein  47.9 
 
 
120 aa  119  9.999999999999999e-27  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1360  response regulator receiver sensor signal transduction histidine kinase  50 
 
 
403 aa  119  9.999999999999999e-27  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0657  response regulator receiver protein  51.2 
 
 
143 aa  119  9.999999999999999e-27  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.771795  normal 
 
 
-
 
NC_008554  Sfum_0654  response regulator receiver protein  48.72 
 
 
413 aa  118  1.9999999999999998e-26  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.113697  normal 
 
 
-
 
NC_008751  Dvul_0407  response regulator receiver protein  51.3 
 
 
128 aa  119  1.9999999999999998e-26  Desulfovibrio vulgaris DP4  Bacteria  normal  0.627834  normal  0.12665 
 
 
-
 
NC_007519  Dde_0321  response regulator receiver domain-containing protein  49.57 
 
 
122 aa  118  3e-26  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0695  response regulator receiver domain-containing protein  46.28 
 
 
141 aa  116  9.999999999999999e-26  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.396926  n/a   
 
 
-
 
NC_008554  Sfum_0620  response regulator receiver protein  48.46 
 
 
142 aa  116  9.999999999999999e-26  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_2331  response regulator receiver protein  41.01 
 
 
142 aa  115  1.9999999999999998e-25  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00000000425244  n/a   
 
 
-
 
NC_007519  Dde_0324  response regulator receiver domain-containing protein  48.62 
 
 
127 aa  114  6.9999999999999995e-25  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.581793  n/a   
 
 
-
 
NC_013173  Dbac_2035  response regulator receiver protein  44.54 
 
 
129 aa  113  8.999999999999998e-25  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0816  response regulator receiver protein  44.35 
 
 
157 aa  112  1.0000000000000001e-24  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0403  response regulator receiver sensor signal transduction histidine kinase  47.9 
 
 
374 aa  112  1.0000000000000001e-24  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.150899 
 
 
-
 
NC_011883  Ddes_0018  response regulator receiver protein  40.83 
 
 
135 aa  112  2.0000000000000002e-24  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  decreased coverage  0.00000218096  n/a   
 
 
-
 
NC_011769  DvMF_1773  response regulator receiver sensor signal transduction histidine kinase  46.56 
 
 
408 aa  112  2.0000000000000002e-24  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_1362  response regulator receiver protein  39.84 
 
 
159 aa  111  4.0000000000000004e-24  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1358  response regulator receiver protein  44.17 
 
 
144 aa  108  2.0000000000000002e-23  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.107991  n/a   
 
 
-
 
NC_013173  Dbac_2272  response regulator receiver sensor signal transduction histidine kinase  44.92 
 
 
382 aa  108  2.0000000000000002e-23  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.275022  n/a   
 
 
-
 
NC_008554  Sfum_0633  response regulator receiver protein  41.54 
 
 
133 aa  108  2.0000000000000002e-23  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.546392  normal 
 
 
-
 
NC_011769  DvMF_2346  response regulator receiver protein  45.38 
 
 
136 aa  108  3e-23  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011769  DvMF_2334  response regulator receiver protein  41.98 
 
 
151 aa  108  3e-23  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_2822  response regulator receiver protein  44.07 
 
 
135 aa  108  3e-23  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1772  response regulator receiver protein  45.08 
 
 
151 aa  107  6e-23  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_2269  response regulator receiver protein  42.5 
 
 
130 aa  106  9.000000000000001e-23  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.740525  n/a   
 
 
-
 
NC_008751  Dvul_0404  response regulator receiver protein  43.8 
 
 
151 aa  104  4e-22  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.134088 
 
 
-
 
NC_009943  Dole_2335  response regulator receiver protein  45.16 
 
 
411 aa  103  6e-22  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.0000388714  n/a   
 
 
-
 
NC_009943  Dole_1348  response regulator receiver protein  38.97 
 
 
173 aa  103  1e-21  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_4779  two component, sigma54 specific, transcriptional regulator, Fis family  40.83 
 
 
494 aa  102  2e-21  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1341  response regulator receiver protein  39.71 
 
 
301 aa  102  2e-21  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2741  two component, sigma54 specific, Fis family transcriptional regulator  41.94 
 
 
474 aa  102  2e-21  Rhodoferax ferrireducens T118  Bacteria  normal  0.0363909  n/a   
 
 
-
 
NC_009943  Dole_2739  two component, sigma54 specific, Fis family transcriptional regulator  37.19 
 
 
451 aa  101  4e-21  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.693002  n/a   
 
 
-
 
NC_007519  Dde_0327  response regulator receiver domain-containing protein  43.33 
 
 
142 aa  100  7e-21  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0332  two component, sigma54 specific, transcriptional regulator, Fis family  39.52 
 
 
469 aa  99.4  1e-20  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.465248 
 
 
-
 
NC_008554  Sfum_3765  two component, sigma54 specific, Fis family transcriptional regulator  41.32 
 
 
463 aa  99.4  1e-20  Syntrophobacter fumaroxidans MPOB  Bacteria  decreased coverage  0.000821276  normal 
 
 
-
 
NC_008751  Dvul_0836  two component, sigma54 specific, Fis family transcriptional regulator  40.32 
 
 
469 aa  99.8  1e-20  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.0464248 
 
 
-
 
NC_013223  Dret_0200  two component, sigma54 specific, transcriptional regulator, Fis family  38.17 
 
 
449 aa  99  2e-20  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1364  two component, sigma54 specific, Fis family transcriptional regulator  38.06 
 
 
485 aa  99  2e-20  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2679  response regulator receiver domain-containing protein  40.68 
 
 
129 aa  99  2e-20  Geobacter metallireducens GS-15  Bacteria  normal  0.380915  normal  0.27601 
 
 
-
 
NC_013501  Rmar_1797  two component, sigma54 specific, transcriptional regulator, Fis family  38.46 
 
 
461 aa  99.4  2e-20  Rhodothermus marinus DSM 4252  Bacteria  normal  0.774224  n/a   
 
 
-
 
NC_008554  Sfum_0656  response regulator receiver protein  41.03 
 
 
129 aa  98.6  2e-20  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.663964  normal 
 
 
-
 
NC_008554  Sfum_0821  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  38.76 
 
 
1139 aa  99  2e-20  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.187038 
 
 
-
 
NC_009767  Rcas_2795  two component transcriptional regulator  38.1 
 
 
266 aa  98.6  2e-20  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_1660  response regulator receiver protein  41.18 
 
 
126 aa  98.6  3e-20  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0328  response regulator receiver domain-containing protein  44.44 
 
 
406 aa  98.2  3e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.918345  n/a   
 
 
-
 
NC_012918  GM21_2553  response regulator receiver protein  41.18 
 
 
126 aa  98.6  3e-20  Geobacter sp. M21  Bacteria  n/a    hitchhiker  2.1194499999999997e-20 
 
 
-
 
NC_008609  Ppro_0710  two component, sigma54 specific, Fis family transcriptional regulator  40.83 
 
 
456 aa  98.6  3e-20  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_2940  two component, sigma54 specific, Fis family transcriptional regulator  38.52 
 
 
500 aa  98.6  3e-20  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2034  response regulator receiver protein  40.31 
 
 
300 aa  97.8  5e-20  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3770  response regulator receiver protein  44.86 
 
 
391 aa  97.1  7e-20  Roseiflexus sp. RS-1  Bacteria  normal  unclonable  0.0000112062 
 
 
-
 
NC_009523  RoseRS_1088  two component transcriptional regulator  36.51 
 
 
264 aa  96.7  9e-20  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.237646 
 
 
-
 
NC_002939  GSU1658  response regulator/GGDEF domain-containing protein  37.5 
 
 
458 aa  96.3  1e-19  Geobacter sulfurreducens PCA  Bacteria  normal  0.939598  n/a   
 
 
-
 
NC_013173  Dbac_2271  response regulator receiver protein  40.8 
 
 
127 aa  96.7  1e-19  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.420434  n/a   
 
 
-
 
NC_005945  BAS2999  DNA-binding response regulator  37.82 
 
 
224 aa  96.7  1e-19  Bacillus anthracis str. Sterne  Bacteria  normal  0.227145  n/a   
 
 
-
 
NC_007530  GBAA_3229  DNA-binding response regulator  37.82 
 
 
224 aa  96.7  1e-19  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_5047  two component, sigma54 specific, Fis family transcriptional regulator  41.8 
 
 
387 aa  96.7  1e-19  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0897789  n/a   
 
 
-
 
NC_009767  Rcas_0845  response regulator receiver modulated metal dependent phosphohydrolase  37.21 
 
 
508 aa  96.7  1e-19  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.903712  hitchhiker  0.00198769 
 
 
-
 
NC_009675  Anae109_3404  two component, sigma54 specific, Fis family transcriptional regulator  38.89 
 
 
455 aa  95.5  2e-19  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.235439  normal  0.675632 
 
 
-
 
NC_007298  Daro_1804  two component, sigma54 specific, Fis family transcriptional regulator  42.61 
 
 
469 aa  95.5  2e-19  Dechloromonas aromatica RCB  Bacteria  normal  0.0358984  normal  0.379225 
 
 
-
 
NC_011773  BCAH820_3235  DNA-binding response regulator  37.82 
 
 
224 aa  95.5  2e-19  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_007908  Rfer_2737  response regulator receiver domain-containing protein  35.51 
 
 
139 aa  95.5  2e-19  Rhodoferax ferrireducens T118  Bacteria  hitchhiker  0.00154696  n/a   
 
 
-
 
NC_008554  Sfum_1934  two component, sigma54 specific, Fis family transcriptional regulator  38.6 
 
 
476 aa  95.9  2e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.808753  normal  0.132653 
 
 
-
 
NC_013501  Rmar_0987  two component transcriptional regulator, winged helix family  36.43 
 
 
233 aa  95.9  2e-19  Rhodothermus marinus DSM 4252  Bacteria  normal  0.195539  n/a   
 
 
-
 
NC_009943  Dole_2811  multi-sensor signal transduction histidine kinase  39.55 
 
 
498 aa  95.9  2e-19  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.782124  n/a   
 
 
-
 
NC_008751  Dvul_2709  response regulator receiver sensor signal transduction histidine kinase  41.67 
 
 
501 aa  95.5  2e-19  Desulfovibrio vulgaris DP4  Bacteria  normal  0.710197  normal  0.745824 
 
 
-
 
NC_007517  Gmet_1914  response regulator receiver modulated diguanylate cyclase  37.5 
 
 
459 aa  95.1  3e-19  Geobacter metallireducens GS-15  Bacteria  normal  0.943888  hitchhiker  0.00021307 
 
 
-
 
NC_008554  Sfum_2806  two component, sigma54 specific, Fis family transcriptional regulator  40 
 
 
450 aa  94.7  3e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1129  sigma-54 dependent DNA-binding response regulator  37.5 
 
 
453 aa  94.7  4e-19  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0853  two component, sigma54 specific, transcriptional regulator, Fis family  37.4 
 
 
459 aa  94.7  4e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.0538681  n/a   
 
 
-
 
NC_009483  Gura_3572  two component, sigma-54 specific, Fis family transcriptional regulator  37.5 
 
 
457 aa  94.7  4e-19  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2764  two component, sigma54 specific, Fis family transcriptional regulator  38.02 
 
 
466 aa  94.7  4e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_2934  response regulator receiver protein  38.66 
 
 
129 aa  94.4  5e-19  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.0000000000852899  n/a   
 
 
-
 
NC_002939  GSU1117  response regulator  39.67 
 
 
127 aa  94.4  5e-19  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2915  sigma-54 dependent DNA-binding response regulator  37.5 
 
 
457 aa  94.4  5e-19  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_2392  two component, sigma54 specific, transcriptional regulator, Fis family  41.94 
 
 
458 aa  94.4  5e-19  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0321511  normal 
 
 
-
 
NC_011772  BCG9842_B2033  DNA-binding response regulator  37.82 
 
 
224 aa  94.4  5e-19  Bacillus cereus G9842  Bacteria  normal  0.725953  normal 
 
 
-
 
NC_011725  BCB4264_A3221  DNA-binding response regulator  37.82 
 
 
224 aa  94.4  5e-19  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0168  two component, sigma54 specific, Fis family transcriptional regulator  38.76 
 
 
459 aa  94.4  5e-19  Desulfovibrio vulgaris DP4  Bacteria  normal  0.564625  normal  0.730975 
 
 
-
 
NC_011891  A2cp1_2343  two component transcriptional regulator, Fis family  42.37 
 
 
185 aa  94  6e-19  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.888574  n/a   
 
 
-
 
NC_007519  Dde_3536  two component Fis family transcriptional regulator  36 
 
 
447 aa  94  6e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1843  two component, sigma54 specific, transcriptional regulator, Fis family  38.52 
 
 
465 aa  94  6e-19  Thauera sp. MZ1T  Bacteria  normal  0.798265  n/a   
 
 
-
 
NC_007760  Adeh_1607  two component Fis family transcriptional regulator  42.37 
 
 
185 aa  94  6e-19  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.016434  n/a   
 
 
-
 
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