More than 300 homologs were found in PanDaTox collection
for query gene Dbac_0313 on replicon NC_013173
Organism: Desulfomicrobium baculatum DSM 4028



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013173  Dbac_0313  response regulator receiver protein  100 
 
 
143 aa  286  9e-77  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0254543  n/a   
 
 
-
 
NC_009943  Dole_1357  response regulator receiver protein  57.66 
 
 
144 aa  155  1e-37  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.48275  n/a   
 
 
-
 
NC_009943  Dole_1351  response regulator receiver protein  52.71 
 
 
141 aa  133  9e-31  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000171187  n/a   
 
 
-
 
NC_008554  Sfum_0648  response regulator receiver protein  47.45 
 
 
151 aa  125  2.0000000000000002e-28  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1350  response regulator receiver protein  44.29 
 
 
147 aa  124  4.0000000000000003e-28  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00189482  n/a   
 
 
-
 
NC_013173  Dbac_0314  response regulator receiver protein  51.2 
 
 
131 aa  123  1e-27  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0234873  n/a   
 
 
-
 
NC_007519  Dde_0695  response regulator receiver domain-containing protein  42.03 
 
 
141 aa  120  6e-27  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.396926  n/a   
 
 
-
 
NC_008554  Sfum_0618  response regulator receiver protein  49.23 
 
 
157 aa  120  7e-27  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1361  response regulator receiver protein  44.93 
 
 
147 aa  119  1.9999999999999998e-26  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1352  response regulator receiver protein  51.18 
 
 
139 aa  118  3e-26  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00001959  n/a   
 
 
-
 
NC_013173  Dbac_2042  response regulator receiver protein  49.6 
 
 
147 aa  115  1.9999999999999998e-25  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0173  response regulator receiver protein  49.57 
 
 
121 aa  110  5e-24  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1773  response regulator receiver sensor signal transduction histidine kinase  47.97 
 
 
408 aa  110  5e-24  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_1807  response regulator receiver protein  46.34 
 
 
139 aa  110  5e-24  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1991  response regulator receiver protein  50 
 
 
153 aa  110  5e-24  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011769  DvMF_1988  response regulator receiver protein  46.96 
 
 
119 aa  106  9.000000000000001e-23  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_0403  response regulator receiver sensor signal transduction histidine kinase  42.74 
 
 
374 aa  106  1e-22  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.150899 
 
 
-
 
NC_011883  Ddes_1566  response regulator receiver protein  46.22 
 
 
126 aa  104  4e-22  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0692  response regulator receiver domain-containing protein  40.32 
 
 
145 aa  103  9e-22  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.000176776  n/a   
 
 
-
 
NC_008554  Sfum_0632  response regulator receiver protein  43.31 
 
 
135 aa  102  1e-21  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1362  response regulator receiver protein  38.81 
 
 
159 aa  102  2e-21  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0620  response regulator receiver protein  44.62 
 
 
142 aa  102  2e-21  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_0407  response regulator receiver protein  43.7 
 
 
128 aa  100  1e-20  Desulfovibrio vulgaris DP4  Bacteria  normal  0.627834  normal  0.12665 
 
 
-
 
NC_008554  Sfum_0657  response regulator receiver protein  44.36 
 
 
143 aa  99.8  1e-20  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.771795  normal 
 
 
-
 
NC_011662  Tmz1t_1843  two component, sigma54 specific, transcriptional regulator, Fis family  41.46 
 
 
465 aa  99  2e-20  Thauera sp. MZ1T  Bacteria  normal  0.798265  n/a   
 
 
-
 
NC_011769  DvMF_1769  response regulator receiver protein  43.7 
 
 
129 aa  98.6  2e-20  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011769  DvMF_2334  response regulator receiver protein  43.59 
 
 
151 aa  99  2e-20  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_2331  response regulator receiver protein  37.32 
 
 
142 aa  98.6  3e-20  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00000000425244  n/a   
 
 
-
 
NC_007519  Dde_0321  response regulator receiver domain-containing protein  40.5 
 
 
122 aa  97.8  5e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1358  response regulator receiver protein  40.34 
 
 
144 aa  96.7  9e-20  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.107991  n/a   
 
 
-
 
NC_013173  Dbac_2272  response regulator receiver sensor signal transduction histidine kinase  43.44 
 
 
382 aa  96.7  1e-19  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.275022  n/a   
 
 
-
 
NC_009943  Dole_1360  response regulator receiver sensor signal transduction histidine kinase  42.11 
 
 
403 aa  96.3  1e-19  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0150  response regulator receiver protein  46.77 
 
 
134 aa  95.1  3e-19  Desulfovibrio vulgaris DP4  Bacteria  normal  0.89872  normal  0.680282 
 
 
-
 
NC_011830  Dhaf_4779  two component, sigma54 specific, transcriptional regulator, Fis family  39.67 
 
 
494 aa  94.7  3e-19  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2335  response regulator receiver protein  46.22 
 
 
411 aa  94.7  3e-19  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.0000388714  n/a   
 
 
-
 
NC_011769  DvMF_1772  response regulator receiver protein  39.02 
 
 
151 aa  95.1  3e-19  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_2827  response regulator receiver protein  38.98 
 
 
137 aa  94.4  5e-19  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0654  response regulator receiver protein  43.7 
 
 
413 aa  94.4  5e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.113697  normal 
 
 
-
 
NC_013173  Dbac_2037  response regulator receiver protein  42.74 
 
 
120 aa  92.8  1e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_3230  flagellar regulatory protein C  35.11 
 
 
446 aa  92  2e-18  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008751  Dvul_0404  response regulator receiver protein  40.83 
 
 
151 aa  92  3e-18  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.134088 
 
 
-
 
NC_011663  Sbal223_1435  two component, sigma54 specific, transcriptional regulator, Fis family  35.11 
 
 
447 aa  89.7  1e-17  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_2928  two component, sigma54 specific, Fis family transcriptional regulator  35.11 
 
 
447 aa  89.7  1e-17  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3070  two component, sigma54 specific, Fis family transcriptional regulator  35.11 
 
 
447 aa  89.7  1e-17  Shewanella baltica OS195  Bacteria  normal  normal  0.6792 
 
 
-
 
NC_007520  Tcr_1444  two component, sigma54 specific, Fis family transcriptional regulator  36.64 
 
 
459 aa  89.7  1e-17  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_1797  two component, sigma54 specific, transcriptional regulator, Fis family  34.53 
 
 
461 aa  90.1  1e-17  Rhodothermus marinus DSM 4252  Bacteria  normal  0.774224  n/a   
 
 
-
 
NC_009665  Shew185_2938  two component, sigma54 specific, Fis family transcriptional regulator  35.11 
 
 
447 aa  89.7  1e-17  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2269  response regulator receiver protein  40.16 
 
 
130 aa  89.4  2e-17  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.740525  n/a   
 
 
-
 
NC_008751  Dvul_2822  response regulator receiver protein  38.52 
 
 
135 aa  89  2e-17  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_0057  histidine kinase  35.29 
 
 
588 aa  88.6  3e-17  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000000000000185994 
 
 
-
 
NC_009943  Dole_2739  two component, sigma54 specific, Fis family transcriptional regulator  35.2 
 
 
451 aa  88.2  3e-17  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.693002  n/a   
 
 
-
 
NC_011146  Gbem_0065  histidine kinase  34.92 
 
 
578 aa  88.2  4e-17  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1129  sigma-54 dependent DNA-binding response regulator  40 
 
 
453 aa  87.8  5e-17  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_3581  two component, sigma54 specific, Fis family transcriptional regulator  40.34 
 
 
490 aa  87.4  6e-17  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.0374719 
 
 
-
 
NC_009483  Gura_0495  two component, sigma-54 specific, Fis family transcriptional regulator  39.67 
 
 
456 aa  87.4  6e-17  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_1280  two component, sigma54 specific, Fis family transcriptional regulator  34.35 
 
 
446 aa  87.4  6e-17  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1347  two component, sigma54 specific, Fis family transcriptional regulator  34.35 
 
 
446 aa  87.4  6e-17  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_011883  Ddes_0816  response regulator receiver protein  38.84 
 
 
157 aa  87  8e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2550  multi-sensor signal transduction histidine kinase  40.34 
 
 
685 aa  87  9e-17  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009483  Gura_3572  two component, sigma-54 specific, Fis family transcriptional regulator  37.5 
 
 
457 aa  86.7  9e-17  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0836  two component, sigma54 specific, Fis family transcriptional regulator  35.83 
 
 
469 aa  87  9e-17  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.0464248 
 
 
-
 
NC_008577  Shewana3_1340  two component, sigma54 specific, Fis family transcriptional regulator  34.35 
 
 
446 aa  86.7  9e-17  Shewanella sp. ANA-3  Bacteria  normal  normal  0.598769 
 
 
-
 
NC_008609  Ppro_1179  two component, sigma54 specific, Fis family transcriptional regulator  38.93 
 
 
457 aa  87  9e-17  Pelobacter propionicus DSM 2379  Bacteria  normal  0.655382  n/a   
 
 
-
 
NC_011883  Ddes_0018  response regulator receiver protein  40.16 
 
 
135 aa  86.7  9e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  decreased coverage  0.00000218096  n/a   
 
 
-
 
NC_011146  Gbem_0671  two component, sigma54 specific, transcriptional regulator, Fis family  39.68 
 
 
469 aa  86.3  1e-16  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1341  response regulator receiver protein  38.52 
 
 
301 aa  86.7  1e-16  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0598  sigma-54 dependent DNA-binding response regulator  39.02 
 
 
470 aa  85.5  2e-16  Geobacter sulfurreducens PCA  Bacteria  normal  0.885444  n/a   
 
 
-
 
NC_002939  GSU1320  sigma-54 dependent DNA-binding response regulator  39.83 
 
 
460 aa  85.5  2e-16  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3555  two component, sigma54 specific, transcriptional regulator, Fis family  43.69 
 
 
489 aa  85.5  2e-16  Anaeromyxobacter sp. K  Bacteria  normal  0.369206  n/a   
 
 
-
 
NC_011891  A2cp1_3623  two component, sigma54 specific, transcriptional regulator, Fis family  43.69 
 
 
489 aa  85.5  2e-16  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.568637  n/a   
 
 
-
 
NC_009523  RoseRS_0338  response regulator receiver modulated metal dependent phosphohydrolase  36.8 
 
 
513 aa  85.5  2e-16  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.102838 
 
 
-
 
NC_007517  Gmet_0812  two component, sigma54 specific, Fis family transcriptional regulator  40 
 
 
453 aa  85.5  2e-16  Geobacter metallireducens GS-15  Bacteria  normal  0.0257022  hitchhiker  0.00000328811 
 
 
-
 
NC_010524  Lcho_3735  two component, sigma54 specific, Fis family transcriptional regulator  36.43 
 
 
459 aa  85.5  2e-16  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008554  Sfum_0643  two component, sigma54 specific, Fis family transcriptional regulator  36.23 
 
 
478 aa  85.5  2e-16  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_2578  two component, sigma54 specific, Fis family transcriptional regulator  34.35 
 
 
446 aa  85.1  3e-16  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1960  response regulator transcription factor  38.84 
 
 
471 aa  85.1  3e-16  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3471  two component, sigma54 specific, Fis family transcriptional regulator  43.69 
 
 
489 aa  85.1  3e-16  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1760  response regulator receiver modulated diguanylate cyclase  38.4 
 
 
473 aa  84.7  4e-16  Geobacter lovleyi SZ  Bacteria  normal  0.554911  n/a   
 
 
-
 
NC_007760  Adeh_0504  two component, sigma54 specific, Fis family transcriptional regulator  34.17 
 
 
443 aa  84.7  4e-16  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1658  response regulator/GGDEF domain-containing protein  40.34 
 
 
458 aa  84.3  5e-16  Geobacter sulfurreducens PCA  Bacteria  normal  0.939598  n/a   
 
 
-
 
NC_011145  AnaeK_2255  two component transcriptional regulator, Fis family  40.57 
 
 
185 aa  84.3  5e-16  Anaeromyxobacter sp. K  Bacteria  normal  0.0449716  n/a   
 
 
-
 
NC_012918  GM21_1811  response regulator receiver modulated metal dependent phosphohydrolase  34.71 
 
 
347 aa  84.3  5e-16  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00843757 
 
 
-
 
NC_013223  Dret_0887  response regulator receiver modulated metal dependent phosphohydrolase  37.01 
 
 
496 aa  84.3  5e-16  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.384329  normal 
 
 
-
 
NC_011146  Gbem_2407  response regulator receiver modulated metal dependent phosphohydrolase  34.71 
 
 
347 aa  84.3  5e-16  Geobacter bemidjiensis Bem  Bacteria  normal  0.21688  n/a   
 
 
-
 
NC_012918  GM21_0684  two component, sigma54 specific, transcriptional regulator, Fis family  40 
 
 
469 aa  84.3  5e-16  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000150794 
 
 
-
 
NC_007760  Adeh_0626  two component, sigma54 specific, Fis family transcriptional regulator  40.83 
 
 
460 aa  84.3  5e-16  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2343  two component transcriptional regulator, Fis family  40.57 
 
 
185 aa  84.3  5e-16  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.888574  n/a   
 
 
-
 
NC_007760  Adeh_1607  two component Fis family transcriptional regulator  40.57 
 
 
185 aa  84.3  5e-16  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.016434  n/a   
 
 
-
 
NC_011769  DvMF_0332  two component, sigma54 specific, transcriptional regulator, Fis family  35 
 
 
469 aa  84  6e-16  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.465248 
 
 
-
 
NC_009253  Dred_1554  response regulator receiver modulated diguanylate cyclase  31.3 
 
 
419 aa  84  6e-16  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0555  two component, sigma54 specific, Fis family transcriptional regulator  38.02 
 
 
457 aa  83.6  8e-16  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_1914  response regulator receiver modulated diguanylate cyclase  40.34 
 
 
459 aa  83.6  8e-16  Geobacter metallireducens GS-15  Bacteria  normal  0.943888  hitchhiker  0.00021307 
 
 
-
 
NC_011145  AnaeK_0537  two component, sigma54 specific, transcriptional regulator, Fis family  34.17 
 
 
446 aa  83.6  8e-16  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_0038  two component transcriptional regulator  40.32 
 
 
228 aa  83.6  8e-16  Dinoroseobacter shibae DFL 12  Bacteria  normal  hitchhiker  0.000503825 
 
 
-
 
NC_007517  Gmet_2924  two component, sigma54 specific, Fis family transcriptional regulator  36.59 
 
 
470 aa  83.6  9e-16  Geobacter metallireducens GS-15  Bacteria  normal  0.777319  hitchhiker  0.0000000000564278 
 
 
-
 
NC_011891  A2cp1_0533  two component, sigma54 specific, transcriptional regulator, Fis family  34.17 
 
 
443 aa  83.6  9e-16  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.141325  n/a   
 
 
-
 
NC_007519  Dde_0327  response regulator receiver domain-containing protein  38.98 
 
 
142 aa  83.2  0.000000000000001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_1322  sigma-54 factor, interaction region  33.59 
 
 
446 aa  82.8  0.000000000000001  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1180  two component, sigma54 specific, transcriptional regulator, Fis family protein  38.64 
 
 
449 aa  82.8  0.000000000000001  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_0200  two component, sigma54 specific, transcriptional regulator, Fis family  30.66 
 
 
449 aa  82.8  0.000000000000001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
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