More than 300 homologs were found in PanDaTox collection
for query gene Dde_0327 on replicon NC_007519
Organism: Desulfovibrio desulfuricans subsp. desulfuricans str. G20



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007519  Dde_0327  response regulator receiver domain-containing protein  100 
 
 
142 aa  282  1.0000000000000001e-75  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2331  response regulator receiver protein  57.04 
 
 
142 aa  174  4e-43  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00000000425244  n/a   
 
 
-
 
NC_008554  Sfum_0618  response regulator receiver protein  48.03 
 
 
157 aa  117  7.999999999999999e-26  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_0173  response regulator receiver protein  48.7 
 
 
121 aa  111  4.0000000000000004e-24  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1357  response regulator receiver protein  41.3 
 
 
144 aa  107  8.000000000000001e-23  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.48275  n/a   
 
 
-
 
NC_011769  DvMF_1988  response regulator receiver protein  47.37 
 
 
119 aa  105  3e-22  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_1807  response regulator receiver protein  39.69 
 
 
139 aa  102  2e-21  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0656  response regulator receiver protein  41.74 
 
 
129 aa  101  4e-21  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.663964  normal 
 
 
-
 
NC_008554  Sfum_0648  response regulator receiver protein  43.33 
 
 
151 aa  100  7e-21  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_4779  two component, sigma54 specific, transcriptional regulator, Fis family  36.3 
 
 
494 aa  98.6  2e-20  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1360  response regulator receiver sensor signal transduction histidine kinase  43.24 
 
 
403 aa  98.2  3e-20  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0654  response regulator receiver protein  42.42 
 
 
413 aa  98.6  3e-20  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.113697  normal 
 
 
-
 
NC_008554  Sfum_0620  response regulator receiver protein  39.69 
 
 
142 aa  97.8  4e-20  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1361  response regulator receiver protein  44.54 
 
 
147 aa  97.4  5e-20  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1350  response regulator receiver protein  38.81 
 
 
147 aa  97.4  6e-20  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00189482  n/a   
 
 
-
 
NC_013173  Dbac_2037  response regulator receiver protein  41.59 
 
 
120 aa  96.3  1e-19  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1769  response regulator receiver protein  45.22 
 
 
129 aa  96.7  1e-19  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_2739  two component, sigma54 specific, Fis family transcriptional regulator  41.03 
 
 
451 aa  95.1  3e-19  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.693002  n/a   
 
 
-
 
NC_013173  Dbac_2042  response regulator receiver protein  41.23 
 
 
147 aa  94.4  4e-19  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1847  two component, sigma54 specific, Fis family transcriptional regulator  37.14 
 
 
459 aa  94.4  5e-19  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.122843  normal  0.436579 
 
 
-
 
NC_008751  Dvul_0407  response regulator receiver protein  43.1 
 
 
128 aa  94.4  5e-19  Desulfovibrio vulgaris DP4  Bacteria  normal  0.627834  normal  0.12665 
 
 
-
 
NC_009943  Dole_1358  response regulator receiver protein  38.13 
 
 
144 aa  92.8  1e-18  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.107991  n/a   
 
 
-
 
NC_011060  Ppha_1319  two component, sigma54 specific, transcriptional regulator, Fis family  32.81 
 
 
452 aa  92.8  1e-18  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_2795  two component transcriptional regulator  32.59 
 
 
266 aa  92  2e-18  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_0321  response regulator receiver domain-containing protein  44.07 
 
 
122 aa  91.7  3e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_6438  putative two component, sigma54 specific, transcriptional regulator, Fis family  34.06 
 
 
394 aa  92  3e-18  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.00615091  normal  0.383003 
 
 
-
 
NC_013457  VEA_001012  putative two-component response regulator  38.33 
 
 
408 aa  91.7  3e-18  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1773  response regulator receiver sensor signal transduction histidine kinase  43.33 
 
 
408 aa  91.3  4e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_2272  response regulator receiver sensor signal transduction histidine kinase  33.74 
 
 
382 aa  90.9  5e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.275022  n/a   
 
 
-
 
NC_013173  Dbac_0314  response regulator receiver protein  36.64 
 
 
131 aa  90.9  5e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0234873  n/a   
 
 
-
 
NC_011146  Gbem_3286  two component, sigma54 specific, transcriptional regulator, Fis family  38.66 
 
 
458 aa  90.9  6e-18  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0632  response regulator receiver protein  37.5 
 
 
135 aa  90.9  6e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011883  Ddes_0816  response regulator receiver protein  42.86 
 
 
157 aa  90.1  8e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1088  two component transcriptional regulator  33.33 
 
 
264 aa  90.1  8e-18  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.237646 
 
 
-
 
NC_009943  Dole_1362  response regulator receiver protein  36.97 
 
 
159 aa  90.1  9e-18  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1352  response regulator receiver protein  43.22 
 
 
139 aa  89.7  1e-17  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00001959  n/a   
 
 
-
 
NC_012918  GM21_0962  two component, sigma54 specific, transcriptional regulator, Fis family  37.82 
 
 
458 aa  89.7  1e-17  Geobacter sp. M21  Bacteria  n/a    normal  0.277353 
 
 
-
 
NC_013501  Rmar_0797  two component, sigma54 specific, transcriptional regulator, Fis family  35.83 
 
 
472 aa  89  2e-17  Rhodothermus marinus DSM 4252  Bacteria  normal  0.241811  n/a   
 
 
-
 
NC_011769  DvMF_1772  response regulator receiver protein  45 
 
 
151 aa  88.6  2e-17  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011883  Ddes_1566  response regulator receiver protein  40.83 
 
 
126 aa  88.2  3e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1992  two component, sigma54 specific, Fis family transcriptional regulator  35.04 
 
 
460 aa  88.2  4e-17  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2335  response regulator receiver protein  37.5 
 
 
411 aa  87.8  4e-17  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.0000388714  n/a   
 
 
-
 
NC_013730  Slin_3615  putative two component, sigma54 specific, transcriptional regulator, Fis family  35.66 
 
 
383 aa  87.4  5e-17  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.176603 
 
 
-
 
NC_011145  AnaeK_1886  two component, sigma54 specific, transcriptional regulator, Fis family  35.04 
 
 
461 aa  87.4  6e-17  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1351  response regulator receiver protein  41.61 
 
 
141 aa  87.4  6e-17  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000171187  n/a   
 
 
-
 
NC_009943  Dole_2811  multi-sensor signal transduction histidine kinase  38.21 
 
 
498 aa  86.7  9e-17  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.782124  n/a   
 
 
-
 
NC_008554  Sfum_0821  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  35.43 
 
 
1139 aa  86.7  9e-17  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.187038 
 
 
-
 
NC_002939  GSU0811  nitrogen regulation protein NtrX  42.31 
 
 
456 aa  86.7  1e-16  Geobacter sulfurreducens PCA  Bacteria  normal  0.686874  n/a   
 
 
-
 
NC_007519  Dde_0692  response regulator receiver domain-containing protein  38.1 
 
 
145 aa  86.7  1e-16  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.000176776  n/a   
 
 
-
 
NC_010803  Clim_1287  two component, sigma54 specific, transcriptional regulator, Fis family  32.81 
 
 
452 aa  85.5  2e-16  Chlorobium limicola DSM 245  Bacteria  normal  0.541874  n/a   
 
 
-
 
NC_007498  Pcar_2015  two component hybrid sensor response regulator  39.13 
 
 
391 aa  85.9  2e-16  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2217  two component transcriptional regulator, winged helix family  37.72 
 
 
276 aa  85.9  2e-16  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00294817  normal 
 
 
-
 
NC_008751  Dvul_2822  response regulator receiver protein  36.13 
 
 
135 aa  85.5  2e-16  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0657  response regulator receiver protein  43.8 
 
 
143 aa  85.5  2e-16  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.771795  normal 
 
 
-
 
NC_007404  Tbd_0085  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  31.65 
 
 
738 aa  84.7  4e-16  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.127866 
 
 
-
 
NC_008554  Sfum_0636  response regulator receiver protein  37.29 
 
 
124 aa  84.7  4e-16  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.621219  normal 
 
 
-
 
NC_009253  Dred_1510  two component, sigma54 specific, Fis family transcriptional regulator  32.48 
 
 
448 aa  84.3  5e-16  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1662  response regulator receiver sensor signal transduction histidine kinase  39.29 
 
 
396 aa  84.3  5e-16  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0404  response regulator receiver protein  43.48 
 
 
151 aa  84  7e-16  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.134088 
 
 
-
 
NC_011769  DvMF_2346  response regulator receiver protein  36.89 
 
 
136 aa  83.6  8e-16  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009784  VIBHAR_07090  nitrogen regulation protein NtrX  35.71 
 
 
407 aa  83.6  8e-16  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010718  Nther_0252  response regulator receiver protein  37.27 
 
 
239 aa  83.6  9e-16  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.114255 
 
 
-
 
NC_009943  Dole_1341  response regulator receiver protein  36.57 
 
 
301 aa  83.2  0.000000000000001  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2551  response regulator receiver sensor signal transduction histidine kinase  39.29 
 
 
396 aa  82.8  0.000000000000001  Geobacter sp. M21  Bacteria  n/a    hitchhiker  1.14529e-19 
 
 
-
 
NC_013173  Dbac_0313  response regulator receiver protein  38.98 
 
 
143 aa  83.2  0.000000000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0254543  n/a   
 
 
-
 
NC_009483  Gura_2914  two component, sigma-54 specific, Fis family transcriptional regulator  32.52 
 
 
459 aa  82.8  0.000000000000001  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1991  response regulator receiver protein  40.35 
 
 
153 aa  82.8  0.000000000000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009483  Gura_0009  multi-sensor signal transduction histidine kinase  33.33 
 
 
508 aa  83.2  0.000000000000001  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0403  response regulator receiver sensor signal transduction histidine kinase  37.88 
 
 
374 aa  83.2  0.000000000000001  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.150899 
 
 
-
 
NC_009483  Gura_0495  two component, sigma-54 specific, Fis family transcriptional regulator  35.96 
 
 
456 aa  82  0.000000000000002  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_2366  two component, sigma54 specific, Fis family transcriptional regulator  34.19 
 
 
385 aa  82.4  0.000000000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000342445  n/a   
 
 
-
 
NC_009943  Dole_1347  response regulator receiver protein  33.05 
 
 
688 aa  82.8  0.000000000000002  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2274  two component, sigma54 specific, Fis family transcriptional regulator  34.82 
 
 
512 aa  82.4  0.000000000000002  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_2027  response regulator receiver  35.4 
 
 
122 aa  82  0.000000000000002  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3443  response regulator receiver protein  37.5 
 
 
223 aa  82.4  0.000000000000002  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_0710  two component, sigma54 specific, Fis family transcriptional regulator  37.61 
 
 
456 aa  82.4  0.000000000000002  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_3581  two component, sigma54 specific, Fis family transcriptional regulator  34.78 
 
 
490 aa  82.4  0.000000000000002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.0374719 
 
 
-
 
NC_007512  Plut_0344  two component Fis family transcriptional regulator  32.03 
 
 
452 aa  81.6  0.000000000000003  Chlorobium luteolum DSM 273  Bacteria  normal  0.0882822  normal  0.355114 
 
 
-
 
NC_007517  Gmet_0776  two component, sigma54 specific, Fis family transcriptional regulator  40.38 
 
 
454 aa  81.6  0.000000000000003  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_0328  response regulator receiver domain-containing protein  36.67 
 
 
406 aa  82  0.000000000000003  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.918345  n/a   
 
 
-
 
NC_010571  Oter_1278  two component, sigma54 specific, Fis family transcriptional regulator  33.33 
 
 
452 aa  81.3  0.000000000000004  Opitutus terrae PB90-1  Bacteria  normal  0.902353  normal 
 
 
-
 
NC_009253  Dred_2001  two component, sigma54 specific, Fis family transcriptional regulator  34.21 
 
 
454 aa  81.6  0.000000000000004  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0268  two component, sigma54 specific, transcriptional regulator, Fis family  32.46 
 
 
456 aa  80.9  0.000000000000005  Geobacter sp. M21  Bacteria  n/a    normal  0.0540037 
 
 
-
 
NC_002939  GSU0008  sensory box histidine kinase/response regulator  35 
 
 
516 aa  81.3  0.000000000000005  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_2258  two component, sigma54 specific, Fis family transcriptional regulator  38.84 
 
 
468 aa  80.9  0.000000000000005  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.428008  normal  0.0222917 
 
 
-
 
NC_011353  ECH74115_5475  transcriptional regulatory protein ZraR  34.96 
 
 
441 aa  80.9  0.000000000000005  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_0812  two component, sigma54 specific, Fis family transcriptional regulator  36.59 
 
 
453 aa  80.9  0.000000000000006  Geobacter metallireducens GS-15  Bacteria  normal  0.0257022  hitchhiker  0.00000328811 
 
 
-
 
NC_007519  Dde_0324  response regulator receiver domain-containing protein  40.35 
 
 
127 aa  80.9  0.000000000000006  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.581793  n/a   
 
 
-
 
NC_007519  Dde_0695  response regulator receiver domain-containing protein  36.69 
 
 
141 aa  80.9  0.000000000000006  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.396926  n/a   
 
 
-
 
NC_009943  Dole_1649  two component, sigma54 specific, Fis family transcriptional regulator  34.78 
 
 
479 aa  80.5  0.000000000000006  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_0289  two component, sigma54 specific, Fis family transcriptional regulator  37.3 
 
 
439 aa  80.9  0.000000000000006  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_2310  two component, sigma54 specific, transcriptional regulator, Fis family  36.5 
 
 
469 aa  80.9  0.000000000000006  Anaeromyxobacter sp. K  Bacteria  normal  0.294968  n/a   
 
 
-
 
NC_011146  Gbem_0283  two component, sigma54 specific, transcriptional regulator, Fis family  32.46 
 
 
456 aa  80.9  0.000000000000006  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_0789  two component, sigma54 specific, transcriptional regulator, Fis family  32.48 
 
 
448 aa  80.9  0.000000000000006  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_2398  two component, sigma54 specific, transcriptional regulator, Fis family  36.5 
 
 
469 aa  80.9  0.000000000000006  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.313034  n/a   
 
 
-
 
NC_013173  Dbac_2273  response regulator receiver protein  40.17 
 
 
139 aa  80.5  0.000000000000007  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.103597  n/a   
 
 
-
 
NC_007498  Pcar_2345  two component signal transduction response regulator  37.17 
 
 
455 aa  80.5  0.000000000000007  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00459366  n/a   
 
 
-
 
NC_007760  Adeh_1555  two component, sigma54 specific, Fis family transcriptional regulator  36.5 
 
 
467 aa  80.5  0.000000000000007  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.21045  n/a   
 
 
-
 
NC_011146  Gbem_0010  multi-sensor signal transduction histidine kinase  36.52 
 
 
511 aa  80.5  0.000000000000007  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_4561  two component, sigma54 specific, Fis family transcriptional regulator  34.38 
 
 
446 aa  80.5  0.000000000000007  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
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