More than 300 homologs were found in PanDaTox collection
for query gene Dbac_2273 on replicon NC_013173
Organism: Desulfomicrobium baculatum DSM 4028



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013173  Dbac_2273  response regulator receiver protein  100 
 
 
139 aa  281  2.0000000000000002e-75  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.103597  n/a   
 
 
-
 
NC_009943  Dole_2335  response regulator receiver protein  43.56 
 
 
411 aa  94  7e-19  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.0000388714  n/a   
 
 
-
 
NC_009943  Dole_2331  response regulator receiver protein  43.48 
 
 
142 aa  90.9  5e-18  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00000000425244  n/a   
 
 
-
 
NC_008751  Dvul_0404  response regulator receiver protein  39.13 
 
 
151 aa  90.9  6e-18  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.134088 
 
 
-
 
NC_011769  DvMF_1772  response regulator receiver protein  40.98 
 
 
151 aa  88.2  3e-17  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007519  Dde_0324  response regulator receiver domain-containing protein  38.05 
 
 
127 aa  87.4  6e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.581793  n/a   
 
 
-
 
NC_009943  Dole_2739  two component, sigma54 specific, Fis family transcriptional regulator  42.28 
 
 
451 aa  87.4  6e-17  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.693002  n/a   
 
 
-
 
NC_009943  Dole_1350  response regulator receiver protein  42.5 
 
 
147 aa  86.7  1e-16  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00189482  n/a   
 
 
-
 
NC_011883  Ddes_0816  response regulator receiver protein  38.98 
 
 
157 aa  86.3  1e-16  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1988  response regulator receiver protein  45.1 
 
 
119 aa  85.9  2e-16  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007519  Dde_0328  response regulator receiver domain-containing protein  35.71 
 
 
406 aa  85.9  2e-16  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.918345  n/a   
 
 
-
 
NC_008751  Dvul_0407  response regulator receiver protein  47.66 
 
 
128 aa  85.9  2e-16  Desulfovibrio vulgaris DP4  Bacteria  normal  0.627834  normal  0.12665 
 
 
-
 
NC_008554  Sfum_0654  response regulator receiver protein  35.9 
 
 
413 aa  85.1  3e-16  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.113697  normal 
 
 
-
 
NC_011769  DvMF_1769  response regulator receiver protein  43.81 
 
 
129 aa  84  6e-16  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_2037  response regulator receiver protein  42 
 
 
120 aa  82.8  0.000000000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1807  response regulator receiver protein  36.76 
 
 
139 aa  82.4  0.000000000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0656  response regulator receiver protein  39.22 
 
 
129 aa  82.4  0.000000000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.663964  normal 
 
 
-
 
NC_007519  Dde_0327  response regulator receiver domain-containing protein  40.17 
 
 
142 aa  80.5  0.000000000000007  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1361  response regulator receiver protein  43.22 
 
 
147 aa  80.1  0.000000000000008  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2269  response regulator receiver protein  44.86 
 
 
130 aa  80.1  0.00000000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.740525  n/a   
 
 
-
 
NC_008751  Dvul_0173  response regulator receiver protein  39.22 
 
 
121 aa  79.7  0.00000000000001  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_1797  two component, sigma54 specific, transcriptional regulator, Fis family  34.81 
 
 
461 aa  78.6  0.00000000000003  Rhodothermus marinus DSM 4252  Bacteria  normal  0.774224  n/a   
 
 
-
 
NC_008554  Sfum_0648  response regulator receiver protein  35.54 
 
 
151 aa  78.2  0.00000000000004  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_0010  PAS/PAC sensor hybrid histidine kinase  42.86 
 
 
508 aa  77.4  0.00000000000006  Geobacter metallireducens GS-15  Bacteria  normal  0.0502065  normal 
 
 
-
 
NC_008554  Sfum_1934  two component, sigma54 specific, Fis family transcriptional regulator  35.71 
 
 
476 aa  77  0.00000000000008  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.808753  normal  0.132653 
 
 
-
 
NC_009943  Dole_1358  response regulator receiver protein  34.43 
 
 
144 aa  77  0.00000000000008  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.107991  n/a   
 
 
-
 
NC_009943  Dole_1364  two component, sigma54 specific, Fis family transcriptional regulator  40.59 
 
 
485 aa  76.3  0.0000000000001  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0632  response regulator receiver protein  36.96 
 
 
135 aa  76.3  0.0000000000001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU2915  sigma-54 dependent DNA-binding response regulator  37.21 
 
 
457 aa  75.5  0.0000000000002  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1377  two component, sigma54 specific, transcriptional regulator, Fis family  36.3 
 
 
462 aa  75.9  0.0000000000002  Geobacter lovleyi SZ  Bacteria  normal  0.244526  n/a   
 
 
-
 
NC_009483  Gura_0495  two component, sigma-54 specific, Fis family transcriptional regulator  37.5 
 
 
456 aa  75.9  0.0000000000002  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0811  nitrogen regulation protein NtrX  41.07 
 
 
456 aa  75.1  0.0000000000003  Geobacter sulfurreducens PCA  Bacteria  normal  0.686874  n/a   
 
 
-
 
NC_009523  RoseRS_3026  signal transduction histidine kinase, nitrogen specific, NtrB  35.64 
 
 
819 aa  75.1  0.0000000000003  Roseiflexus sp. RS-1  Bacteria  normal  0.956622  normal 
 
 
-
 
NC_007517  Gmet_0555  two component, sigma54 specific, Fis family transcriptional regulator  37.98 
 
 
457 aa  75.1  0.0000000000003  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_0196  two component transcriptional regulator  33.33 
 
 
226 aa  75.1  0.0000000000003  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_0710  two component, sigma54 specific, Fis family transcriptional regulator  38.1 
 
 
456 aa  75.1  0.0000000000003  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2039  two component, sigma54 specific, Fis family transcriptional regulator  39.05 
 
 
476 aa  75.1  0.0000000000003  Desulfovibrio vulgaris DP4  Bacteria  normal  0.238588  normal 
 
 
-
 
NC_010184  BcerKBAB4_2944  two component transcriptional regulator  38.98 
 
 
224 aa  74.7  0.0000000000004  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0958095  n/a   
 
 
-
 
NC_013173  Dbac_2042  response regulator receiver protein  34.96 
 
 
147 aa  74.3  0.0000000000005  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0618  response regulator receiver protein  39.05 
 
 
157 aa  74.3  0.0000000000005  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0620  response regulator receiver protein  38.21 
 
 
142 aa  74.3  0.0000000000005  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3460  two component, sigma54 specific, transcriptional regulator, Fis family  37.19 
 
 
444 aa  74.3  0.0000000000005  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0376131  normal 
 
 
-
 
NC_007519  Dde_0321  response regulator receiver domain-containing protein  38.1 
 
 
122 aa  73.9  0.0000000000007  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4689  two component, sigma54 specific, Fis family transcriptional regulator  37.19 
 
 
447 aa  73.9  0.0000000000007  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.338732 
 
 
-
 
NC_008554  Sfum_0652  response regulator receiver protein  40 
 
 
122 aa  73.9  0.0000000000007  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.429078  normal 
 
 
-
 
NC_010571  Oter_1278  two component, sigma54 specific, Fis family transcriptional regulator  34.92 
 
 
452 aa  73.6  0.0000000000008  Opitutus terrae PB90-1  Bacteria  normal  0.902353  normal 
 
 
-
 
NC_007498  Pcar_2345  two component signal transduction response regulator  33.85 
 
 
455 aa  73.2  0.000000000001  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00459366  n/a   
 
 
-
 
NC_007517  Gmet_0776  two component, sigma54 specific, Fis family transcriptional regulator  39.29 
 
 
454 aa  73.2  0.000000000001  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_0545  multi-sensor signal transduction histidine kinase  39.09 
 
 
896 aa  73.2  0.000000000001  Methanospirillum hungatei JF-1  Archaea  normal  0.91043  normal 
 
 
-
 
NC_008554  Sfum_2764  two component, sigma54 specific, Fis family transcriptional regulator  37.14 
 
 
466 aa  72.8  0.000000000001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_3169  two component, sigma54 specific, transcriptional regulator, Fis family  36.36 
 
 
444 aa  73.2  0.000000000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.254755  normal  0.187976 
 
 
-
 
NC_011772  BCG9842_B2033  DNA-binding response regulator  37.29 
 
 
224 aa  72.8  0.000000000002  Bacillus cereus G9842  Bacteria  normal  0.725953  normal 
 
 
-
 
NC_009441  Fjoh_5047  two component, sigma54 specific, Fis family transcriptional regulator  37.82 
 
 
387 aa  72  0.000000000002  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0897789  n/a   
 
 
-
 
NC_011725  BCB4264_A3221  DNA-binding response regulator  37.29 
 
 
224 aa  72.8  0.000000000002  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2737  response regulator receiver domain-containing protein  37.84 
 
 
139 aa  72  0.000000000002  Rhodoferax ferrireducens T118  Bacteria  hitchhiker  0.00154696  n/a   
 
 
-
 
NC_008554  Sfum_0636  response regulator receiver protein  36.59 
 
 
124 aa  72.4  0.000000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.621219  normal 
 
 
-
 
NC_009675  Anae109_3404  two component, sigma54 specific, Fis family transcriptional regulator  36 
 
 
455 aa  72  0.000000000002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.235439  normal  0.675632 
 
 
-
 
NC_011080  SNSL254_A4507  transcriptional regulatory protein ZraR  36.97 
 
 
441 aa  71.6  0.000000000003  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.0570238 
 
 
-
 
NC_007796  Mhun_3038  signal transduction histidine kinase  35.29 
 
 
878 aa  71.6  0.000000000003  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_011094  SeSA_A4385  transcriptional regulatory protein ZraR  36.97 
 
 
441 aa  71.6  0.000000000003  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.712665 
 
 
-
 
NC_011205  SeD_A4581  transcriptional regulatory protein ZraR  36.97 
 
 
441 aa  71.6  0.000000000003  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_009513  Lreu_0058  two component transcriptional regulator  31.5 
 
 
221 aa  71.6  0.000000000003  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00000000551146  n/a   
 
 
-
 
NC_009943  Dole_1347  response regulator receiver protein  36.92 
 
 
688 aa  71.6  0.000000000004  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_1463  multi-sensor signal transduction histidine kinase  33.33 
 
 
768 aa  71.2  0.000000000004  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.103172  normal 
 
 
-
 
NC_008009  Acid345_1394  two component, sigma54 specific, Fis family transcriptional regulator  39 
 
 
450 aa  71.2  0.000000000004  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.205793  normal  0.0550645 
 
 
-
 
NC_007484  Noc_0847  two component diguanylate cyclase  32.56 
 
 
327 aa  70.9  0.000000000005  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_0675  two component, sigma54 specific, Fis family transcriptional regulator  36.21 
 
 
579 aa  70.9  0.000000000005  Psychrobacter cryohalolentis K5  Bacteria  normal  0.775979  normal 
 
 
-
 
NC_011149  SeAg_B4418  transcriptional regulatory protein ZraR  37.29 
 
 
441 aa  70.9  0.000000000005  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.298897  n/a   
 
 
-
 
NC_011083  SeHA_C4505  transcriptional regulatory protein ZraR  36.97 
 
 
441 aa  70.9  0.000000000005  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.11324 
 
 
-
 
NC_011769  DvMF_1993  two component, sigma54 specific, transcriptional regulator, Fis family  35.04 
 
 
486 aa  70.9  0.000000000006  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_005945  BAS2999  DNA-binding response regulator  36.44 
 
 
224 aa  70.5  0.000000000007  Bacillus anthracis str. Sterne  Bacteria  normal  0.227145  n/a   
 
 
-
 
NC_007530  GBAA_3229  DNA-binding response regulator  36.44 
 
 
224 aa  70.5  0.000000000007  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0657  response regulator receiver protein  44.66 
 
 
143 aa  70.5  0.000000000007  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.771795  normal 
 
 
-
 
NC_013173  Dbac_2034  response regulator receiver protein  37.7 
 
 
300 aa  70.5  0.000000000008  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0916  two component, sigma-54 specific, Fis family transcriptional regulator  34.4 
 
 
480 aa  70.5  0.000000000008  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1362  response regulator receiver protein  31.62 
 
 
159 aa  70.5  0.000000000008  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_03881  fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein  36.13 
 
 
441 aa  69.7  0.00000000001  Escherichia coli BL21(DE3)  Bacteria  normal  0.0124745  n/a   
 
 
-
 
NC_011353  ECH74115_5475  transcriptional regulatory protein ZraR  38.46 
 
 
441 aa  69.7  0.00000000001  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_1510  two component, sigma54 specific, Fis family transcriptional regulator  36.44 
 
 
448 aa  70.1  0.00000000001  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_0086  two component transcriptional regulator, winged helix family  31.2 
 
 
223 aa  69.7  0.00000000001  Anaerococcus prevotii DSM 20548  Bacteria  hitchhiker  0.00000430601  n/a   
 
 
-
 
NC_013730  Slin_3615  putative two component, sigma54 specific, transcriptional regulator, Fis family  32.8 
 
 
383 aa  69.7  0.00000000001  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.176603 
 
 
-
 
NC_010468  EcolC_4021  transcriptional regulatory protein ZraR  36.13 
 
 
441 aa  69.7  0.00000000001  Escherichia coli ATCC 8739  Bacteria  normal  0.0128092  normal  0.0227655 
 
 
-
 
NC_009712  Mboo_2110  multi-sensor signal transduction histidine kinase  34.31 
 
 
789 aa  69.7  0.00000000001  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.377648  normal 
 
 
-
 
NC_009767  Rcas_2148  multi-sensor hybrid histidine kinase  31.4 
 
 
819 aa  70.1  0.00000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.233006  hitchhiker  0.00949178 
 
 
-
 
NC_011773  BCAH820_3235  DNA-binding response regulator  36.44 
 
 
224 aa  69.7  0.00000000001  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_007912  Sde_2296  response regulator receiver domain-containing protein  34.78 
 
 
222 aa  69.7  0.00000000001  Saccharophagus degradans 2-40  Bacteria  normal  hitchhiker  0.0000621544 
 
 
-
 
NC_012892  B21_03834  hypothetical protein  36.13 
 
 
441 aa  69.7  0.00000000001  Escherichia coli BL21  Bacteria  normal  0.0118236  n/a   
 
 
-
 
NC_009943  Dole_2811  multi-sensor signal transduction histidine kinase  36.45 
 
 
498 aa  69.7  0.00000000001  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.782124  n/a   
 
 
-
 
NC_009972  Haur_4259  multi-sensor hybrid histidine kinase  31.4 
 
 
804 aa  69.3  0.00000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_4779  two component, sigma54 specific, transcriptional regulator, Fis family  33.61 
 
 
494 aa  69.3  0.00000000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3989  two component, sigma54 specific, transcriptional regulator, Fis family  38.46 
 
 
441 aa  68.9  0.00000000002  Escherichia coli DH1  Bacteria  normal  0.716922  n/a   
 
 
-
 
NC_007355  Mbar_A2388  response regulator receiver  38.89 
 
 
127 aa  69.3  0.00000000002  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0389923  normal  0.541574 
 
 
-
 
NC_012918  GM21_0268  two component, sigma54 specific, transcriptional regulator, Fis family  34.88 
 
 
456 aa  69.3  0.00000000002  Geobacter sp. M21  Bacteria  n/a    normal  0.0540037 
 
 
-
 
NC_010718  Nther_0252  response regulator receiver protein  35.24 
 
 
239 aa  69.3  0.00000000002  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.114255 
 
 
-
 
NC_010498  EcSMS35_4454  transcriptional regulatory protein ZraR  36.13 
 
 
441 aa  69.3  0.00000000002  Escherichia coli SMS-3-5  Bacteria  normal  0.209341  hitchhiker  0.000519331 
 
 
-
 
NC_007760  Adeh_0302  two component, sigma54 specific, Fis family transcriptional regulator  38.46 
 
 
465 aa  68.9  0.00000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3572  two component, sigma-54 specific, Fis family transcriptional regulator  33.91 
 
 
457 aa  68.9  0.00000000002  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007955  Mbur_0359  CheY like protein  39.64 
 
 
120 aa  68.9  0.00000000002  Methanococcoides burtonii DSM 6242  Archaea  normal  0.0502207  n/a   
 
 
-
 
NC_009483  Gura_0009  multi-sensor signal transduction histidine kinase  39.05 
 
 
508 aa  69.3  0.00000000002  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_4257  two component, sigma54 specific, Fis family transcriptional regulator  37.14 
 
 
463 aa  68.9  0.00000000002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
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