Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4454 |
Symbol | zraR |
ID | 6142865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 4547824 |
End bp | 4549149 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641619273 |
Product | transcriptional regulatory protein ZraR |
Protein accession | YP_001746389 |
Protein GI | 170680150 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.209341 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.000519331 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGCACG ATAATATCGA TATTCTGGTG GTGGATGATG ACATTAGCCA CTGCACTATT TTGCAGGCTT TACTGCGCGG CTGGGGCTAT AACGTCGCGC TGGCGAACAG CGGGCGACAG GCGCTGGAGC AGGTGCGGGA ACAGGTTTTT GATCTTGTGC TTTGCGATGT GCGAATGGCA GAGATGGACG GCATCGCCAC GCTCAAAGAG ATCAAAGCGT TAAATCCGGC AATTCCGGTA CTGATTATGA CCGCGTACTC CAGCGTCGAG ACGGCGGTAG AGGCGTTGAA AACCGGGGCG CTGGATTATC TCATCAAGCC GCTGGATTTC GATAACCTGC AGGCGACGCT GGAAAAGGCC CTCGCGCATA CGCACAGTAT TGACGCTGAA ACGCCTGCGG TGTCTGCCAG CCAGTTCGGT ATGGTCGGTA AAAGCCCGGC GATGCAACAC CTGCTCAGTG AAATCGCCCT CGTCGCGCCA TCGGAAGCCA CGGTGCTGAT CCATGGCGAT TCCGGCACCG GTAAAGAGCT GGTCGCCAGG GCGATTCACG CCAGTAGCGC ACGGAGTGAA AAACCACTGG TAACGCTCAA CTGTGCGGCA CTCAACGAAT CCTTGCTGGA ATCTGAATTG TTCGGTCACG AAAAAGGGGC GTTTACCGGG GCCGACAAAC GGCGGGAGGG GCGCTTTGTT GAGGCGGACG GCGGCACGTT GTTTCTCGAT GAAATTGGCG ATATCTCGCC GATGATGCAG GTGCGTCTGC TACGTGCGAT TCAGGAGCGC GAAGTTCAGC GTGTCGGCAG CAACCAGACC ATCTCGGTTG ATGTCCGGCT GATTGCGGCG ACTCATCGCG ATCTTGCCGC AGAGGTGAAT GCCGGGCGTT TTCGCCAGGA TCTCTACTAT CGCCTGAACG TGGTGGCGAT TGAAGTTCCG TCGCTGCGTC AGCGGCGGGA AGATATTCCT CTGCTGACAA ACCATTTTCT TCAGCGCTTT GCCGAGCGTA ATCGCAAGGC GGTAAAAGGT TTTACGCCCC AGGCGATGGA TCTGCTGATT CACTACGACT GGCCGGGAAA TATTCGTGAA CTGGAAAACG CGGTGGAACG GGCGGTGGTG CTGCTGACCG GGGAATATAT TTCCGAACGC GAGCTGCCGC TGGCGATTGC GAGTACGCCG ATCCCGCTGG TACAAAGTCA GGATATTCAG CCGCTGGTGG AAGTCGAAAA AGAGGTGATT CTTGCGGCAC TGGAGAAAAC GGGCGGCAAC AAAACCGAAG CCGCCCGTCA GTTAGGGATC ACGCGCAAAA CGCTCTTGGC AAAACTGTCG CGTTAG
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Protein sequence | MTHDNIDILV VDDDISHCTI LQALLRGWGY NVALANSGRQ ALEQVREQVF DLVLCDVRMA EMDGIATLKE IKALNPAIPV LIMTAYSSVE TAVEALKTGA LDYLIKPLDF DNLQATLEKA LAHTHSIDAE TPAVSASQFG MVGKSPAMQH LLSEIALVAP SEATVLIHGD SGTGKELVAR AIHASSARSE KPLVTLNCAA LNESLLESEL FGHEKGAFTG ADKRREGRFV EADGGTLFLD EIGDISPMMQ VRLLRAIQER EVQRVGSNQT ISVDVRLIAA THRDLAAEVN AGRFRQDLYY RLNVVAIEVP SLRQRREDIP LLTNHFLQRF AERNRKAVKG FTPQAMDLLI HYDWPGNIRE LENAVERAVV LLTGEYISER ELPLAIASTP IPLVQSQDIQ PLVEVEKEVI LAALEKTGGN KTEAARQLGI TRKTLLAKLS R
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