Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4507 |
Symbol | |
ID | 6486378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 4379976 |
End bp | 4381301 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642739736 |
Product | transcriptional regulatory protein ZraR |
Protein accession | YP_002043422 |
Protein GI | 194442721 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 0.0570238 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATACGCG GAAAAATCGA TATTCTGGTT GTGGATGATG ATGTAAGCCA CTGCACGATT TTACAGGCGC TGCTTCGGGG CTGGGGCTAT AACGTCGCTC TGGCCTACAG TGGGCATGAT GCGTTGGCTC AGGTGCGTGA GAAAGTCTTT GATCTGGTAC TGTGCGATGT GCGTATGGCG GAGATGGACG GTATCGCCAC GCTGAAGGAG ATTAAAGCGC TCAATCCCGC CATTCCGATT TTGATTATGA CGGCATTTTC CAGCGTGGAA ACGGCGGTAG AGGCGTTGAA AGCCGGCGCG CTCGACTATT TAATTAAACC GCTGGATTTT GACCGTCTGC AGGAGACGCT GGAAAAGGCG TTGGCGCATA CGCGGGAAAC GGGCGCTGAA TTGCCATCGG CGTCGGCTGC GCAATTTGGC ATGATAGGCA GCAGTCCGGC GATGCAACAT TTACTGAATG AAATCGCGAT GGTCGCACCA TCAGACGCCA CGGTATTGAT TCACGGAGAC TCCGGCACGG GTAAAGAGCT GGTGGCGCGG GCGCTACACG CCTGTAGCGC CAGGAGCGAT AAACCGCTGG TCACGCTCAA CTGCGCCGCG CTTAATGAAT CGCTGCTGGA GTCCGAGCTG TTTGGTCACG AAAAAGGCGC GTTTACCGGC GCGGATAAAC GTCGGGAAGG ACGCTTTGTC GAAGCTGACG GCGGGACATT GTTTCTTGAT GAGATCGGCG ATATCTCGCC GTTAATGCAG GTACGTTTGC TGCGGGCGAT TCAGGAGCGC GAAGTGCAAC GCGTGGGAAG TAACCAGACG ATATCTGTAG ATGTTCGATT GATTGCCGCT ACCCACCGCG ACCTGGCGGA AGAGGTCAGT GCCGGGCGTT TTCGCCAGGA TCTCTACTAC CGTCTGAACG TGGTCACTAT AGAAATGCCC GCATTATGTC AACGTCGGGA AGATATTCCG CTACTGGCGG AACATTTTCT CCAGCGTTTT GCCGCGCGTA ACCGTAAAGC GGTGAAAGGT TTTACTCCGC AGGCGATGGA TCTGCTGATT CACTACGGCT GGCCGGGGAA TATCCGTGAG CTGGAAAACG CGGTAGAGCG GGCGGTGGTA CTGCTGACGG GGGAGTATAT TTCTGAACGC GAACTGCCGC TGGCAATTGC CGCGACGCCA ATAAAAACGG AATACAGTGG CGAGATCCAG CCGCTGGTGG AAGTGGAGAA AGAGGTGATT CTGGCGGCGC TGGAAAAAAC GGGCGGCAAC AAAACGGAAG CCGCCCGTCA GTTAGGCATT ACGCGTAAAA CGCTGCTGGC GAAAATTTCG CGTTAG
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Protein sequence | MIRGKIDILV VDDDVSHCTI LQALLRGWGY NVALAYSGHD ALAQVREKVF DLVLCDVRMA EMDGIATLKE IKALNPAIPI LIMTAFSSVE TAVEALKAGA LDYLIKPLDF DRLQETLEKA LAHTRETGAE LPSASAAQFG MIGSSPAMQH LLNEIAMVAP SDATVLIHGD SGTGKELVAR ALHACSARSD KPLVTLNCAA LNESLLESEL FGHEKGAFTG ADKRREGRFV EADGGTLFLD EIGDISPLMQ VRLLRAIQER EVQRVGSNQT ISVDVRLIAA THRDLAEEVS AGRFRQDLYY RLNVVTIEMP ALCQRREDIP LLAEHFLQRF AARNRKAVKG FTPQAMDLLI HYGWPGNIRE LENAVERAVV LLTGEYISER ELPLAIAATP IKTEYSGEIQ PLVEVEKEVI LAALEKTGGN KTEAARQLGI TRKTLLAKIS R
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