More than 300 homologs were found in PanDaTox collection
for query gene Dde_0324 on replicon NC_007519
Organism: Desulfovibrio desulfuricans subsp. desulfuricans str. G20



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007519  Dde_0324  response regulator receiver domain-containing protein  100 
 
 
127 aa  256  7e-68  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.581793  n/a   
 
 
-
 
NC_011883  Ddes_0816  response regulator receiver protein  57.41 
 
 
157 aa  124  5e-28  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1772  response regulator receiver protein  56.67 
 
 
151 aa  122  1e-27  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_0404  response regulator receiver protein  55 
 
 
151 aa  122  2e-27  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.134088 
 
 
-
 
NC_007519  Dde_0328  response regulator receiver domain-containing protein  50.85 
 
 
406 aa  119  9.999999999999999e-27  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.918345  n/a   
 
 
-
 
NC_009943  Dole_2335  response regulator receiver protein  50.83 
 
 
411 aa  119  9.999999999999999e-27  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.0000388714  n/a   
 
 
-
 
NC_008554  Sfum_0654  response regulator receiver protein  52.21 
 
 
413 aa  117  6e-26  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.113697  normal 
 
 
-
 
NC_008554  Sfum_0648  response regulator receiver protein  45.08 
 
 
151 aa  114  3.9999999999999997e-25  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2269  response regulator receiver protein  47.9 
 
 
130 aa  112  2.0000000000000002e-24  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.740525  n/a   
 
 
-
 
NC_007519  Dde_0321  response regulator receiver domain-containing protein  50 
 
 
122 aa  109  1.0000000000000001e-23  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0656  response regulator receiver protein  46.72 
 
 
129 aa  106  9.000000000000001e-23  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.663964  normal 
 
 
-
 
NC_013173  Dbac_2271  response regulator receiver protein  46.09 
 
 
127 aa  104  3e-22  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.420434  n/a   
 
 
-
 
NC_011769  DvMF_1769  response regulator receiver protein  47.58 
 
 
129 aa  103  1e-21  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_0407  response regulator receiver protein  45.69 
 
 
128 aa  102  2e-21  Desulfovibrio vulgaris DP4  Bacteria  normal  0.627834  normal  0.12665 
 
 
-
 
NC_013173  Dbac_2037  response regulator receiver protein  41.67 
 
 
120 aa  100  6e-21  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1843  two component, sigma54 specific, transcriptional regulator, Fis family  40 
 
 
465 aa  97.8  5e-20  Thauera sp. MZ1T  Bacteria  normal  0.798265  n/a   
 
 
-
 
NC_009943  Dole_1357  response regulator receiver protein  44.86 
 
 
144 aa  97.4  6e-20  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.48275  n/a   
 
 
-
 
NC_011883  Ddes_1566  response regulator receiver protein  44.74 
 
 
126 aa  97.4  6e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0173  response regulator receiver protein  42.74 
 
 
121 aa  96.3  1e-19  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0636  response regulator receiver protein  42.24 
 
 
124 aa  96.3  1e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.621219  normal 
 
 
-
 
NC_013173  Dbac_1807  response regulator receiver protein  44.44 
 
 
139 aa  95.5  2e-19  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1358  response regulator receiver protein  44.83 
 
 
144 aa  95.1  3e-19  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.107991  n/a   
 
 
-
 
NC_009943  Dole_2331  response regulator receiver protein  40 
 
 
142 aa  94.4  4e-19  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00000000425244  n/a   
 
 
-
 
NC_011769  DvMF_2334  response regulator receiver protein  44.44 
 
 
151 aa  94.4  5e-19  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_0314  response regulator receiver protein  43.64 
 
 
131 aa  92.8  1e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0234873  n/a   
 
 
-
 
NC_013173  Dbac_2035  response regulator receiver protein  38.71 
 
 
129 aa  93.2  1e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0618  response regulator receiver protein  38.84 
 
 
157 aa  92.8  2e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1350  response regulator receiver protein  37.4 
 
 
147 aa  91.7  3e-18  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00189482  n/a   
 
 
-
 
NC_009943  Dole_1347  response regulator receiver protein  41.32 
 
 
688 aa  91.7  3e-18  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1361  response regulator receiver protein  40.87 
 
 
147 aa  91.3  4e-18  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0814  response regulator receiver protein  40.83 
 
 
132 aa  89.7  1e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1362  response regulator receiver protein  34.4 
 
 
159 aa  89.4  1e-17  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1988  response regulator receiver protein  40.74 
 
 
119 aa  89.4  2e-17  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_2273  response regulator receiver protein  37.93 
 
 
139 aa  89  2e-17  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.103597  n/a   
 
 
-
 
NC_013173  Dbac_2272  response regulator receiver sensor signal transduction histidine kinase  41.74 
 
 
382 aa  89  2e-17  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.275022  n/a   
 
 
-
 
NC_009675  Anae109_1951  two component, sigma54 specific, Fis family transcriptional regulator  42.61 
 
 
470 aa  88.2  3e-17  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.516267  normal 
 
 
-
 
NC_007760  Adeh_1908  two component, sigma54 specific, Fis family transcriptional regulator  41.74 
 
 
473 aa  88.2  3e-17  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1971  two component, sigma54 specific, transcriptional regulator, Fis family  41.74 
 
 
473 aa  88.2  3e-17  Anaeromyxobacter sp. K  Bacteria  normal  0.0887215  n/a   
 
 
-
 
NC_011891  A2cp1_2056  two component, sigma54 specific, transcriptional regulator, Fis family  41.74 
 
 
473 aa  88.2  3e-17  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.732718  n/a   
 
 
-
 
NC_008554  Sfum_0632  response regulator receiver protein  39.82 
 
 
135 aa  88.2  3e-17  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0652  response regulator receiver protein  40.71 
 
 
122 aa  88.6  3e-17  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.429078  normal 
 
 
-
 
NC_009943  Dole_1351  response regulator receiver protein  42.02 
 
 
141 aa  87.8  4e-17  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000171187  n/a   
 
 
-
 
NC_009483  Gura_0495  two component, sigma-54 specific, Fis family transcriptional regulator  40.83 
 
 
456 aa  87.4  6e-17  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_4779  two component, sigma54 specific, transcriptional regulator, Fis family  38.4 
 
 
494 aa  87  7e-17  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0403  response regulator receiver sensor signal transduction histidine kinase  46.3 
 
 
374 aa  86.3  1e-16  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.150899 
 
 
-
 
NC_010730  SYO3AOP1_1480  two component transcriptional regulator, winged helix family  38.89 
 
 
219 aa  85.9  2e-16  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.000000000681553  n/a   
 
 
-
 
NC_008554  Sfum_0633  response regulator receiver protein  39.84 
 
 
133 aa  85.5  2e-16  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.546392  normal 
 
 
-
 
NC_009943  Dole_1341  response regulator receiver protein  43.1 
 
 
301 aa  85.9  2e-16  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2827  response regulator receiver protein  40.35 
 
 
137 aa  85.1  3e-16  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_0313  response regulator receiver protein  39.83 
 
 
143 aa  84.7  4e-16  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0254543  n/a   
 
 
-
 
NC_011769  DvMF_1773  response regulator receiver sensor signal transduction histidine kinase  42.86 
 
 
408 aa  84.7  4e-16  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_1352  response regulator receiver protein  36.59 
 
 
139 aa  84.7  4e-16  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00001959  n/a   
 
 
-
 
NC_007519  Dde_0695  response regulator receiver domain-containing protein  42.34 
 
 
141 aa  84.7  4e-16  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.396926  n/a   
 
 
-
 
NC_011369  Rleg2_3169  two component, sigma54 specific, transcriptional regulator, Fis family  35.83 
 
 
444 aa  84.3  5e-16  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.254755  normal  0.187976 
 
 
-
 
NC_009943  Dole_1360  response regulator receiver sensor signal transduction histidine kinase  38.05 
 
 
403 aa  84  6e-16  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0817  response regulator receiver sensor signal transduction histidine kinase  41.82 
 
 
451 aa  84  7e-16  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2741  two component, sigma54 specific, Fis family transcriptional regulator  37.4 
 
 
474 aa  84  7e-16  Rhodoferax ferrireducens T118  Bacteria  normal  0.0363909  n/a   
 
 
-
 
NC_012850  Rleg_3460  two component, sigma54 specific, transcriptional regulator, Fis family  35 
 
 
444 aa  82.8  0.000000000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0376131  normal 
 
 
-
 
NC_011883  Ddes_0018  response regulator receiver protein  37.4 
 
 
135 aa  82.4  0.000000000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  decreased coverage  0.00000218096  n/a   
 
 
-
 
NC_002939  GSU2915  sigma-54 dependent DNA-binding response regulator  37.5 
 
 
457 aa  82.4  0.000000000000002  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1804  two component, sigma54 specific, Fis family transcriptional regulator  39.5 
 
 
469 aa  82  0.000000000000002  Dechloromonas aromatica RCB  Bacteria  normal  0.0358984  normal  0.379225 
 
 
-
 
NC_011769  DvMF_1991  response regulator receiver protein  41.12 
 
 
153 aa  82  0.000000000000003  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013501  Rmar_1797  two component, sigma54 specific, transcriptional regulator, Fis family  34.68 
 
 
461 aa  82  0.000000000000003  Rhodothermus marinus DSM 4252  Bacteria  normal  0.774224  n/a   
 
 
-
 
NC_007519  Dde_0327  response regulator receiver domain-containing protein  39.83 
 
 
142 aa  81.6  0.000000000000003  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_0097  two component, sigma54 specific, transcriptional regulator, Fis family  33.33 
 
 
448 aa  81.6  0.000000000000003  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0657  response regulator receiver protein  40.17 
 
 
143 aa  82  0.000000000000003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.771795  normal 
 
 
-
 
NC_008751  Dvul_2039  two component, sigma54 specific, Fis family transcriptional regulator  42.28 
 
 
476 aa  81.3  0.000000000000004  Desulfovibrio vulgaris DP4  Bacteria  normal  0.238588  normal 
 
 
-
 
NC_010001  Cphy_0196  two component transcriptional regulator  34.43 
 
 
226 aa  81.3  0.000000000000004  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2679  response regulator receiver domain-containing protein  33.62 
 
 
129 aa  81.3  0.000000000000004  Geobacter metallireducens GS-15  Bacteria  normal  0.380915  normal  0.27601 
 
 
-
 
NC_007963  Csal_0717  two component, sigma54 specific, Fis family transcriptional regulator  37.9 
 
 
466 aa  81.3  0.000000000000004  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0555  two component, sigma54 specific, Fis family transcriptional regulator  35.83 
 
 
457 aa  80.9  0.000000000000005  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_0539  multi-sensor hybrid histidine kinase  39.09 
 
 
816 aa  80.9  0.000000000000005  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.146269  normal 
 
 
-
 
NC_007498  Pcar_1994  two component signal transduction response regulator  37.39 
 
 
477 aa  80.9  0.000000000000006  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3740  two component, sigma-54 specific, Fis family transcriptional regulator  34.4 
 
 
454 aa  80.9  0.000000000000006  Geobacter uraniireducens Rf4  Bacteria  normal  0.0840186  n/a   
 
 
-
 
NC_007912  Sde_2296  response regulator receiver domain-containing protein  34.75 
 
 
222 aa  80.5  0.000000000000007  Saccharophagus degradans 2-40  Bacteria  normal  hitchhiker  0.0000621544 
 
 
-
 
NC_009483  Gura_3572  two component, sigma-54 specific, Fis family transcriptional regulator  37.5 
 
 
457 aa  80.5  0.000000000000008  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1117  response regulator  33.9 
 
 
127 aa  80.1  0.000000000000009  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1960  response regulator transcription factor  35.83 
 
 
471 aa  80.1  0.000000000000009  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_3404  two component, sigma54 specific, Fis family transcriptional regulator  38.1 
 
 
455 aa  80.1  0.000000000000009  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.235439  normal  0.675632 
 
 
-
 
NC_009483  Gura_2934  response regulator receiver protein  32.2 
 
 
129 aa  79.7  0.00000000000001  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.0000000000852899  n/a   
 
 
-
 
NC_009943  Dole_2739  two component, sigma54 specific, Fis family transcriptional regulator  33.96 
 
 
451 aa  80.1  0.00000000000001  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.693002  n/a   
 
 
-
 
NC_013515  Smon_1490  two component transcriptional regulator, winged helix family  36.11 
 
 
225 aa  80.1  0.00000000000001  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_014150  Bmur_0931  response regulator receiver protein  35.51 
 
 
430 aa  79.7  0.00000000000001  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0692  response regulator receiver domain-containing protein  34.19 
 
 
145 aa  79.3  0.00000000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.000176776  n/a   
 
 
-
 
NC_013173  Dbac_2034  response regulator receiver protein  36.45 
 
 
300 aa  79  0.00000000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_4429  two component transcriptional regulator  38.89 
 
 
250 aa  79  0.00000000000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.133228  normal 
 
 
-
 
NC_009253  Dred_2001  two component, sigma54 specific, Fis family transcriptional regulator  37.17 
 
 
454 aa  79.3  0.00000000000002  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2333  response regulator receiver protein  39.81 
 
 
117 aa  79.3  0.00000000000002  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.0000000530573  n/a   
 
 
-
 
NC_009675  Anae109_2258  two component, sigma54 specific, Fis family transcriptional regulator  38.33 
 
 
468 aa  78.2  0.00000000000003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.428008  normal  0.0222917 
 
 
-
 
NC_009767  Rcas_1114  response regulator receiver modulated serine phosphatase  40.54 
 
 
391 aa  78.2  0.00000000000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A2938  transcriptional regulator ZraR  35.29 
 
 
445 aa  78.2  0.00000000000003  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_3717  response regulator receiver sensor signal transduction histidine kinase  38.71 
 
 
401 aa  78.6  0.00000000000003  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A0007  two component Fis family transcriptional regulator  36.79 
 
 
187 aa  78.6  0.00000000000003  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C2825  transcriptional regulator ZraR  35.29 
 
 
445 aa  78.2  0.00000000000003  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.479389  normal 
 
 
-
 
NC_007777  Francci3_0321  two component transcriptional regulator  37.21 
 
 
406 aa  78.6  0.00000000000003  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_1278  two component, sigma54 specific, Fis family transcriptional regulator  36.21 
 
 
452 aa  78.6  0.00000000000003  Opitutus terrae PB90-1  Bacteria  normal  0.902353  normal 
 
 
-
 
NC_011094  SeSA_A2804  transcriptional regulatory protein ZraR  35.29 
 
 
445 aa  78.2  0.00000000000003  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B2721  sigma-54 dependent transcriptional regulator/response regulator  35.29 
 
 
445 aa  78.2  0.00000000000003  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A2763  transcriptional regulator ZraR  35.29 
 
 
445 aa  78.2  0.00000000000003  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_0200  two component, sigma54 specific, transcriptional regulator, Fis family  37.5 
 
 
449 aa  77.8  0.00000000000004  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
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