| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2148 |
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| Symbol | |
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| ID | 5539628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2757315 |
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| End bp | 2759774 |
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| Gene Length | 2460 bp |
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| Protein Length | 819 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640894282 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001432251 |
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| Protein GI | 156742122 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.233006 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00949178 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAGAAA TCCTGATCAT CGACGACAGC AAGCAGATCT GCTCCATGCT TGCTGAGTAT
GTGTTACCGG AGCTCGGCTA TGCCTCTACG ATTGCGCACA CCGGACGGCA GGGACTCAAC
CGCCTGCGTC AGCGCATTCC CGATCTGATT CTGCTCGATC TGCAACTTCC TGACATCAGT
GGACTCGATC TGCTGCGCAT GATTGCTCAG GAAGGGTACG ATGTCCCCGT GATCCTGATG
ACGGCGCATG GGTCGGAAGC GATTGCGGTC GAAGCATTTC GGCTTGGAGC GCGGAACTAC
CTGATCAAGC CGTTTAGCGA GACGGAAGCG CAGGCGGCAA TCGATCGGGC GCTGCGCGAG
CGGCGTCTCA AGCGTGAAAA AGAACTTCTG ACGCGCAATC TGCGCCAGCG TGTGCAAGAA
CTGACCGTGC TGTATTCCAT TGGCAAGTCG GTGAGTTCTT TGCTCGACCT CGAAGAATTG
CTGGTGCGCA TCGTTGAAGC CGGGGTCTAC ATTACTCGCG CTGAAGAAGG GTTTTTGTTG
CTGCGCGACC CCAACGCCAA CGAACTCTAT CTGCGCGCAG CGAAGAACCT CGGCGAGCAG
CGCGCTCAAA AGTTGCGCAT GCCAATCGAC GATAGCCTCG CCGGGCAGGT CATTCGCACC
GGCAAGCCAA TCCGCCTCGA TAAAGCCGGC GCCGGAGCGC AACTCAAAGT CATCACCGGC
TTCCTGGTGC GCGCCATCCT GCAAGTGCCG CTCATGGTCG GCAATCAGGT CATCGGTGTG
CTTGCGGTTG ATAATCAACA GTCAGAACGG ACGTTTAGCG AAAATGATCA GTATCTGCTC
TCGGCGCTCG CCGATTATGC CGCCATTGCC ATAGAAAATG CGCGCCTCTA TCAGAAGGTG
AAACAGAGTG AAGCGCGCTA CCGCGACCTG TTCGACAACG CCAACGACCT GATCTTCACC
CTTGATCGCC AACTCAACAT TCGCAGCATC AACAAAGTTG GTCCGACCAT CACAGGATAT
GCCGGAGACG ATCTGATCGG TCGCCCATTG CGCACCGTGC TATTCGAGGA TGCATGGGCG
CCGGTCGAGC GCCTGCTGAG CAAAGTGTTG CGGGGAGAGA CGACGCCCCC ATTCGAACTG
CAACTCAGGC GCTACGACGA AGAGACCGTC GTGCTCGAAG TCAGTGCGCG GTTGATACAG
GACGGTGATC GCGCCGAGGC AATCCATTGC ATTGCCCGCG ATCTGACAGA GCGCCGTCGT
CTCGAAGAGC AACTCATCAG ATCGGAGAAA CTCTCCGCTA TCGGGCAACT TGTCGCGGGC
GTCGCTCACG AGGTCAACAA TCCGTTGACC AGCATCAGCG GCTATACGCA ATTGATGCTG
CGTGATACAA GCCTGTCGCC GGGGATTCGC GAAGATCTGC AACACATCAA CACGCAGGCA
GAGCGCGCAG CGCGCATTGT GCAGAATCTG CTCATGTTCG CCCGTGAACA TAAGCCGCAG
CGCACGCTTG TCGATATCAA TCAGGTGCTG CAAAGCACCC TGACGCTGCG CGCCTATCAG
TTGCGCGTCG ACAATATTAC TATCGTGACT GATTTCGCTC CCAACCTGCC GCAAACGGTC
GCCGATCCGC ATCAATTACA ACAGGTGTTC CTCAACCTGA TTAACAATGC GCATCAGGCA
ATGACCGAAC GCGGCGGCAA GGGAACCCTG ACTCTGCGCA CGTCGGTCGA ACCGTGCGTC
GGCGAGGGCA ATCGTGAGGA GCGGTGCATT CGTATCGCCG TAAGCGATAC TGGCGTCGGT
ATTTCGCCGC GCAACCTGAG CCGCATCTTC GATCCGTTCT TCACCACCAA ACCGGTTGGT
CAGGGAACCG GGTTGGGTCT GTCGATCTGT TTCGGCATCA TCCAGGAGCA TCACGGGCGT
CTCTGGGCGG AAAGCGAAGT TGGCGTCGGC ACGACAATGT ATGTCGAATT GCCGCTTACC
CATGACTACG ACATAGTGCT CGACGCGCCG GATGAACCAT CGTCAACCGT GGTTGACGAA
GAGACGAATG CTGAAGAGAC GAACCATGGC GCTGCGATTC TGGTTGTTGA TGATGAGGAA
GCAGTGCGTG CGCTGCTGGC GCGATTGTTG ACCGATCTCG GTCATCGTCC GACGACCGTC
GCCAGCGGAG AAGCAGCGTT TGAGATCATC GCGCAACGAT CATTCGATCT TATTCTGACG
GACATCAAGA TGCCCGGCAT GACCGGCTTC GAGTTGTATC AGCACATCAG ACAGCGGGAT
CCACATCTGG CGCAGCGCAT TATTTTCATT ACCGGCGACA CTATCACGGC ATCGACACAG
GCGCGACTGG CGCAGACCGG CAATCCCTAC CTTGCGAAAC CATTTGCCAT CGAGCGTCTC
GAAGCACTGG TGAACGCCTG TCTCGCTTCG CAGTCGGCGG GTCAATTGCC AGCGTCCTGA
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| Protein sequence | MEEILIIDDS KQICSMLAEY VLPELGYAST IAHTGRQGLN RLRQRIPDLI LLDLQLPDIS
GLDLLRMIAQ EGYDVPVILM TAHGSEAIAV EAFRLGARNY LIKPFSETEA QAAIDRALRE
RRLKREKELL TRNLRQRVQE LTVLYSIGKS VSSLLDLEEL LVRIVEAGVY ITRAEEGFLL
LRDPNANELY LRAAKNLGEQ RAQKLRMPID DSLAGQVIRT GKPIRLDKAG AGAQLKVITG
FLVRAILQVP LMVGNQVIGV LAVDNQQSER TFSENDQYLL SALADYAAIA IENARLYQKV
KQSEARYRDL FDNANDLIFT LDRQLNIRSI NKVGPTITGY AGDDLIGRPL RTVLFEDAWA
PVERLLSKVL RGETTPPFEL QLRRYDEETV VLEVSARLIQ DGDRAEAIHC IARDLTERRR
LEEQLIRSEK LSAIGQLVAG VAHEVNNPLT SISGYTQLML RDTSLSPGIR EDLQHINTQA
ERAARIVQNL LMFAREHKPQ RTLVDINQVL QSTLTLRAYQ LRVDNITIVT DFAPNLPQTV
ADPHQLQQVF LNLINNAHQA MTERGGKGTL TLRTSVEPCV GEGNREERCI RIAVSDTGVG
ISPRNLSRIF DPFFTTKPVG QGTGLGLSIC FGIIQEHHGR LWAESEVGVG TTMYVELPLT
HDYDIVLDAP DEPSSTVVDE ETNAEETNHG AAILVVDDEE AVRALLARLL TDLGHRPTTV
ASGEAAFEII AQRSFDLILT DIKMPGMTGF ELYQHIRQRD PHLAQRIIFI TGDTITASTQ
ARLAQTGNPY LAKPFAIERL EALVNACLAS QSAGQLPAS
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