More than 300 homologs were found in PanDaTox collection
for query gene Dde_0321 on replicon NC_007519
Organism: Desulfovibrio desulfuricans subsp. desulfuricans str. G20



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007519  Dde_0321  response regulator receiver domain-containing protein  100 
 
 
122 aa  240  5e-63  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1769  response regulator receiver protein  61.86 
 
 
129 aa  149  1e-35  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_0407  response regulator receiver protein  61.02 
 
 
128 aa  140  7e-33  Desulfovibrio vulgaris DP4  Bacteria  normal  0.627834  normal  0.12665 
 
 
-
 
NC_013173  Dbac_2269  response regulator receiver protein  55.83 
 
 
130 aa  135  2e-31  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.740525  n/a   
 
 
-
 
NC_008554  Sfum_0648  response regulator receiver protein  49.57 
 
 
151 aa  118  3e-26  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_1807  response regulator receiver protein  49.15 
 
 
139 aa  115  9.999999999999999e-26  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2335  response regulator receiver protein  50.88 
 
 
411 aa  114  6e-25  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.0000388714  n/a   
 
 
-
 
NC_011769  DvMF_1772  response regulator receiver protein  51.26 
 
 
151 aa  113  1.0000000000000001e-24  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_0404  response regulator receiver protein  50.42 
 
 
151 aa  111  4.0000000000000004e-24  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.134088 
 
 
-
 
NC_008554  Sfum_0652  response regulator receiver protein  50 
 
 
122 aa  110  7.000000000000001e-24  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.429078  normal 
 
 
-
 
NC_008554  Sfum_0654  response regulator receiver protein  51.75 
 
 
413 aa  110  7.000000000000001e-24  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.113697  normal 
 
 
-
 
NC_008751  Dvul_0173  response regulator receiver protein  46.96 
 
 
121 aa  110  8.000000000000001e-24  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_0324  response regulator receiver domain-containing protein  50 
 
 
127 aa  108  2.0000000000000002e-23  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.581793  n/a   
 
 
-
 
NC_007519  Dde_0328  response regulator receiver domain-containing protein  49.53 
 
 
406 aa  109  2.0000000000000002e-23  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.918345  n/a   
 
 
-
 
NC_008554  Sfum_0656  response regulator receiver protein  46.15 
 
 
129 aa  108  2.0000000000000002e-23  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.663964  normal 
 
 
-
 
NC_009943  Dole_1360  response regulator receiver sensor signal transduction histidine kinase  47.79 
 
 
403 aa  108  2.0000000000000002e-23  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1988  response regulator receiver protein  45.38 
 
 
119 aa  108  2.0000000000000002e-23  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_0314  response regulator receiver protein  46.09 
 
 
131 aa  107  4.0000000000000004e-23  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0234873  n/a   
 
 
-
 
NC_011883  Ddes_0816  response regulator receiver protein  47.86 
 
 
157 aa  107  7.000000000000001e-23  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2271  response regulator receiver protein  44.63 
 
 
127 aa  106  9.000000000000001e-23  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.420434  n/a   
 
 
-
 
NC_009943  Dole_1351  response regulator receiver protein  44.54 
 
 
141 aa  106  1e-22  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000171187  n/a   
 
 
-
 
NC_009943  Dole_1357  response regulator receiver protein  44.74 
 
 
144 aa  105  3e-22  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.48275  n/a   
 
 
-
 
NC_008554  Sfum_0618  response regulator receiver protein  43.22 
 
 
157 aa  104  3e-22  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1773  response regulator receiver sensor signal transduction histidine kinase  46.55 
 
 
408 aa  104  4e-22  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008554  Sfum_0632  response regulator receiver protein  44.07 
 
 
135 aa  103  8e-22  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011883  Ddes_1566  response regulator receiver protein  43.2 
 
 
126 aa  102  1e-21  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0403  response regulator receiver sensor signal transduction histidine kinase  48.21 
 
 
374 aa  103  1e-21  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.150899 
 
 
-
 
NC_009943  Dole_1350  response regulator receiver protein  39.83 
 
 
147 aa  102  2e-21  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00189482  n/a   
 
 
-
 
NC_013132  Cpin_0693  two component transcriptional regulator, winged helix family  43.24 
 
 
229 aa  100  6e-21  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1991  response regulator receiver protein  47.41 
 
 
153 aa  100  9e-21  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_010730  SYO3AOP1_1480  two component transcriptional regulator, winged helix family  41.59 
 
 
219 aa  99.4  2e-20  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.000000000681553  n/a   
 
 
-
 
NC_013946  Mrub_1402  two component transcriptional regulator, winged helix family  43.24 
 
 
241 aa  98.2  3e-20  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.154165 
 
 
-
 
NC_007777  Francci3_0321  two component transcriptional regulator  40.87 
 
 
406 aa  98.6  3e-20  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_2739  two component, sigma54 specific, Fis family transcriptional regulator  36.52 
 
 
451 aa  98.2  3e-20  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.693002  n/a   
 
 
-
 
NC_013173  Dbac_0313  response regulator receiver protein  40.5 
 
 
143 aa  97.8  5e-20  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0254543  n/a   
 
 
-
 
NC_013173  Dbac_2042  response regulator receiver protein  41.38 
 
 
147 aa  97.4  6e-20  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2331  response regulator receiver protein  41.23 
 
 
142 aa  97.4  6e-20  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00000000425244  n/a   
 
 
-
 
NC_013173  Dbac_2037  response regulator receiver protein  40.17 
 
 
120 aa  97.4  6e-20  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1003  nitrogen regulation protein NR(I)  38.46 
 
 
481 aa  96.3  1e-19  Geobacter sulfurreducens PCA  Bacteria  normal  0.158383  n/a   
 
 
-
 
NC_013132  Cpin_4089  two component transcriptional regulator, winged helix family  40 
 
 
230 aa  95.5  2e-19  Chitinophaga pinensis DSM 2588  Bacteria  normal  hitchhiker  0.00519658 
 
 
-
 
NC_009512  Pput_4322  two component, sigma54 specific, Fis family transcriptional regulator  40.52 
 
 
444 aa  95.5  2e-19  Pseudomonas putida F1  Bacteria  normal  0.713581  normal 
 
 
-
 
NC_009943  Dole_2333  response regulator receiver protein  43.59 
 
 
117 aa  95.5  2e-19  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.0000000530573  n/a   
 
 
-
 
NC_013173  Dbac_2272  response regulator receiver sensor signal transduction histidine kinase  42.61 
 
 
382 aa  95.5  2e-19  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.275022  n/a   
 
 
-
 
NC_011145  AnaeK_2310  two component, sigma54 specific, transcriptional regulator, Fis family  42.06 
 
 
469 aa  95.1  3e-19  Anaeromyxobacter sp. K  Bacteria  normal  0.294968  n/a   
 
 
-
 
NC_009483  Gura_1986  two component heavy metal response transcriptional regulator  38.94 
 
 
223 aa  94.7  3e-19  Geobacter uraniireducens Rf4  Bacteria  normal  0.0566795  n/a   
 
 
-
 
NC_007519  Dde_0695  response regulator receiver domain-containing protein  43.1 
 
 
141 aa  94.7  3e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.396926  n/a   
 
 
-
 
NC_011891  A2cp1_2398  two component, sigma54 specific, transcriptional regulator, Fis family  42.06 
 
 
469 aa  95.1  3e-19  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.313034  n/a   
 
 
-
 
NC_011886  Achl_0804  two component transcriptional regulator, winged helix family  37.82 
 
 
246 aa  95.1  3e-19  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013889  TK90_0242  two component transcriptional regulator, winged helix family  37.17 
 
 
238 aa  94.7  3e-19  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.206504  normal  0.26673 
 
 
-
 
NC_007760  Adeh_1555  two component, sigma54 specific, Fis family transcriptional regulator  42.06 
 
 
467 aa  94.7  4e-19  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.21045  n/a   
 
 
-
 
NC_002947  PP_1401  two component, sigma54 specific, transcriptional regulator, Fis family  40.52 
 
 
444 aa  94.4  5e-19  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_013124  Afer_0558  two component transcriptional regulator, winged helix family  38.94 
 
 
237 aa  94.4  5e-19  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7562  two component transcriptional regulator, winged helix family  41.07 
 
 
273 aa  94  6e-19  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.320599  normal 
 
 
-
 
NC_013757  Gobs_4657  two component transcriptional regulator, winged helix family  38.05 
 
 
240 aa  93.6  7e-19  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2563  two component, sigma54 specific, Fis family transcriptional regulator  38.98 
 
 
480 aa  93.6  8e-19  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00247378 
 
 
-
 
NC_010814  Glov_2786  two component, sigma54 specific, transcriptional regulator, Fis family  38.46 
 
 
480 aa  93.6  8e-19  Geobacter lovleyi SZ  Bacteria  normal  0.543097  n/a   
 
 
-
 
NC_014212  Mesil_2988  two component transcriptional regulator, winged helix family  41.07 
 
 
256 aa  93.6  9e-19  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A3189  twitching motility protein  42.37 
 
 
121 aa  93.6  9e-19  Methylibium petroleiphilum PM1  Bacteria  normal  0.612166  normal  0.249154 
 
 
-
 
NC_009483  Gura_0916  two component, sigma-54 specific, Fis family transcriptional regulator  38.52 
 
 
480 aa  92.8  1e-18  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_5255  two component transcriptional regulator, winged helix family  40 
 
 
242 aa  93.2  1e-18  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0134474  normal 
 
 
-
 
NC_007517  Gmet_0555  two component, sigma54 specific, Fis family transcriptional regulator  36.07 
 
 
457 aa  93.2  1e-18  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_3235  DNA-binding response regulator  40.18 
 
 
224 aa  92.4  2e-18  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_008541  Arth_0655  two component transcriptional regulator  36.13 
 
 
246 aa  92.4  2e-18  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_2266  two component transcriptional regulator  43.24 
 
 
249 aa  92.4  2e-18  Mycobacterium gilvum PYR-GCK  Bacteria  decreased coverage  0.00896474  normal 
 
 
-
 
NC_009565  TBFG_10772  two component system response transcriptional positive regulator phoP  38.6 
 
 
247 aa  92  3e-18  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.864575 
 
 
-
 
NC_011661  Dtur_0154  two component transcriptional regulator, winged helix family  38.94 
 
 
220 aa  91.7  3e-18  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.443854  n/a   
 
 
-
 
NC_009943  Dole_1358  response regulator receiver protein  40 
 
 
144 aa  92  3e-18  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.107991  n/a   
 
 
-
 
NC_007404  Tbd_0904  two component Fis family transcriptional regulator  40.87 
 
 
454 aa  91.7  3e-18  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.629928  normal 
 
 
-
 
NC_009953  Sare_1866  response regulator receiver modulated diguanylate cyclase  42.86 
 
 
326 aa  91.7  3e-18  Salinispora arenicola CNS-205  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_0327  response regulator receiver domain-containing protein  44.07 
 
 
142 aa  91.7  3e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_4159  two component transcriptional regulator  38.74 
 
 
230 aa  92  3e-18  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.667277  normal  0.0359145 
 
 
-
 
NC_008726  Mvan_4844  two component transcriptional regulator  38.05 
 
 
231 aa  91.7  3e-18  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.312171 
 
 
-
 
NC_013595  Sros_8879  response regulator receiver protein  38.6 
 
 
235 aa  91.7  3e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  0.103439  normal 
 
 
-
 
NC_011988  Avi_6145  two component response regulator  42.34 
 
 
229 aa  91.3  4e-18  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_0999  response regulator receiver modulated serine phosphatase  45.28 
 
 
602 aa  91.3  4e-18  Opitutus terrae PB90-1  Bacteria  normal  0.118416  hitchhiker  0.00369461 
 
 
-
 
NC_009483  Gura_0495  two component, sigma-54 specific, Fis family transcriptional regulator  38.74 
 
 
456 aa  91.3  4e-18  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_03275  two-component system, transcriptional regulatory protein  35.04 
 
 
234 aa  91.3  4e-18  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0987  two component transcriptional regulator, winged helix family  37.5 
 
 
233 aa  91.3  4e-18  Rhodothermus marinus DSM 4252  Bacteria  normal  0.195539  n/a   
 
 
-
 
NC_013093  Amir_1724  two component transcriptional regulator, winged helix family  40.54 
 
 
243 aa  91.3  4e-18  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0264  two component transcriptional regulator  37.93 
 
 
238 aa  91.3  4e-18  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.392693  n/a   
 
 
-
 
NC_009338  Mflv_1887  two component transcriptional regulator  38.05 
 
 
231 aa  91.3  4e-18  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.882564  normal  0.344123 
 
 
-
 
NC_011369  Rleg2_3169  two component, sigma54 specific, transcriptional regulator, Fis family  37.5 
 
 
444 aa  90.9  5e-18  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.254755  normal  0.187976 
 
 
-
 
NC_007519  Dde_0692  response regulator receiver domain-containing protein  40.35 
 
 
145 aa  90.9  5e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.000176776  n/a   
 
 
-
 
NC_009675  Anae109_2258  two component, sigma54 specific, Fis family transcriptional regulator  38.53 
 
 
468 aa  90.9  5e-18  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.428008  normal  0.0222917 
 
 
-
 
NC_008699  Noca_3695  response regulator receiver  35.65 
 
 
236 aa  90.9  5e-18  Nocardioides sp. JS614  Bacteria  normal  0.795948  n/a   
 
 
-
 
NC_008726  Mvan_4429  two component transcriptional regulator  42.34 
 
 
250 aa  90.9  5e-18  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.133228  normal 
 
 
-
 
NC_010322  PputGB1_4410  two component, sigma54 specific, Fis family transcriptional regulator  40 
 
 
444 aa  90.5  6e-18  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_3631  two component transcriptional regulator, winged helix family  40.18 
 
 
235 aa  90.9  6e-18  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_15610  Response regulator, transciptional regulatory protein  42.61 
 
 
225 aa  90.9  6e-18  Azotobacter vinelandii DJ  Bacteria  normal  0.0572115  n/a   
 
 
-
 
NC_011830  Dhaf_2193  two component transcriptional regulator, winged helix family  41.23 
 
 
237 aa  90.5  7e-18  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0620475  n/a   
 
 
-
 
NC_010501  PputW619_1042  two component, sigma54 specific, Fis family transcriptional regulator  39.13 
 
 
444 aa  90.5  7e-18  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_13797  two component transcriptional regulatory protein  43.12 
 
 
286 aa  90.5  7e-18  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.173423 
 
 
-
 
NC_013501  Rmar_0513  two component transcriptional regulator, winged helix family  41.82 
 
 
228 aa  90.5  7e-18  Rhodothermus marinus DSM 4252  Bacteria  normal  0.985837  n/a   
 
 
-
 
NC_013440  Hoch_6548  response regulator receiver sensor signal transduction histidine kinase  38.33 
 
 
397 aa  90.5  8e-18  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.543575 
 
 
-
 
NC_011769  DvMF_1993  two component, sigma54 specific, transcriptional regulator, Fis family  37.61 
 
 
486 aa  90.5  8e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008554  Sfum_1934  two component, sigma54 specific, Fis family transcriptional regulator  37.93 
 
 
476 aa  90.1  8e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.808753  normal  0.132653 
 
 
-
 
NC_009380  Strop_1873  response regulator receiver  42.86 
 
 
326 aa  90.1  8e-18  Salinispora tropica CNB-440  Bacteria  normal  normal  0.402703 
 
 
-
 
NC_013385  Adeg_0532  two component, sigma54 specific, transcriptional regulator, Fis family  40 
 
 
470 aa  90.1  9e-18  Ammonifex degensii KC4  Bacteria  hitchhiker  0.00706375  n/a   
 
 
-
 
NC_008751  Dvul_2853  two component, sigma54 specific, Fis family transcriptional regulator  38.46 
 
 
476 aa  90.1  9e-18  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3460  two component, sigma54 specific, transcriptional regulator, Fis family  36.67 
 
 
444 aa  89.7  1e-17  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0376131  normal 
 
 
-
 
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