More than 300 homologs were found in PanDaTox collection
for query gene Dbac_2042 on replicon NC_013173
Organism: Desulfomicrobium baculatum DSM 4028



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013173  Dbac_2042  response regulator receiver protein  100 
 
 
147 aa  298  2e-80  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1357  response regulator receiver protein  49.26 
 
 
144 aa  138  1.9999999999999998e-32  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.48275  n/a   
 
 
-
 
NC_008554  Sfum_0620  response regulator receiver protein  51.49 
 
 
142 aa  134  6.0000000000000005e-31  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1361  response regulator receiver protein  48.15 
 
 
147 aa  127  7.000000000000001e-29  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0648  response regulator receiver protein  48.48 
 
 
151 aa  126  1.0000000000000001e-28  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1991  response regulator receiver protein  52.99 
 
 
153 aa  125  2.0000000000000002e-28  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008554  Sfum_0618  response regulator receiver protein  48.44 
 
 
157 aa  124  3e-28  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1350  response regulator receiver protein  48.82 
 
 
147 aa  122  1e-27  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00189482  n/a   
 
 
-
 
NC_009943  Dole_1351  response regulator receiver protein  48 
 
 
141 aa  117  3.9999999999999996e-26  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000171187  n/a   
 
 
-
 
NC_013173  Dbac_1807  response regulator receiver protein  48.72 
 
 
139 aa  117  3.9999999999999996e-26  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0314  response regulator receiver protein  48.78 
 
 
131 aa  117  7e-26  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0234873  n/a   
 
 
-
 
NC_013173  Dbac_0313  response regulator receiver protein  49.6 
 
 
143 aa  115  1.9999999999999998e-25  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0254543  n/a   
 
 
-
 
NC_008751  Dvul_0173  response regulator receiver protein  45.69 
 
 
121 aa  115  1.9999999999999998e-25  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_1088  two component transcriptional regulator  38.46 
 
 
264 aa  110  5e-24  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.237646 
 
 
-
 
NC_008751  Dvul_0403  response regulator receiver sensor signal transduction histidine kinase  45.74 
 
 
374 aa  107  8.000000000000001e-23  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.150899 
 
 
-
 
NC_009943  Dole_1362  response regulator receiver protein  43.09 
 
 
159 aa  106  1e-22  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0407  response regulator receiver protein  45.38 
 
 
128 aa  105  1e-22  Desulfovibrio vulgaris DP4  Bacteria  normal  0.627834  normal  0.12665 
 
 
-
 
NC_009767  Rcas_2795  two component transcriptional regulator  38.76 
 
 
266 aa  106  1e-22  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0657  response regulator receiver protein  47.76 
 
 
143 aa  105  1e-22  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.771795  normal 
 
 
-
 
NC_011831  Cagg_2217  two component transcriptional regulator, winged helix family  39.26 
 
 
276 aa  105  2e-22  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00294817  normal 
 
 
-
 
NC_013173  Dbac_2037  response regulator receiver protein  46.09 
 
 
120 aa  104  4e-22  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1358  response regulator receiver protein  43.07 
 
 
144 aa  104  5e-22  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.107991  n/a   
 
 
-
 
NC_011769  DvMF_1769  response regulator receiver protein  43.7 
 
 
129 aa  103  6e-22  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_0150  response regulator receiver protein  51.26 
 
 
134 aa  103  6e-22  Desulfovibrio vulgaris DP4  Bacteria  normal  0.89872  normal  0.680282 
 
 
-
 
NC_011883  Ddes_1566  response regulator receiver protein  42.62 
 
 
126 aa  103  6e-22  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1773  response regulator receiver sensor signal transduction histidine kinase  42.25 
 
 
408 aa  102  2e-21  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011830  Dhaf_4779  two component, sigma54 specific, transcriptional regulator, Fis family  39.5 
 
 
494 aa  101  3e-21  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2739  two component, sigma54 specific, Fis family transcriptional regulator  36.8 
 
 
451 aa  101  4e-21  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.693002  n/a   
 
 
-
 
NC_008554  Sfum_1934  two component, sigma54 specific, Fis family transcriptional regulator  38.89 
 
 
476 aa  100  4e-21  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.808753  normal  0.132653 
 
 
-
 
NC_002967  TDE1969  sigma-54 dependent transcriptional regulator/response regulator  45.22 
 
 
473 aa  100  5e-21  Treponema denticola ATCC 35405  Bacteria  normal  0.440374  n/a   
 
 
-
 
NC_009943  Dole_1352  response regulator receiver protein  42.86 
 
 
139 aa  100  5e-21  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00001959  n/a   
 
 
-
 
NC_013173  Dbac_2034  response regulator receiver protein  40.46 
 
 
300 aa  100  5e-21  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0215  two component, sigma54 specific, transcriptional regulator, Fis family  41.86 
 
 
528 aa  100  6e-21  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0571306 
 
 
-
 
NC_008751  Dvul_2827  response regulator receiver protein  48.6 
 
 
137 aa  100  6e-21  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_2334  response regulator receiver protein  50 
 
 
151 aa  100  6e-21  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008554  Sfum_0632  response regulator receiver protein  43.22 
 
 
135 aa  100  6e-21  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_2709  response regulator receiver sensor signal transduction histidine kinase  45.38 
 
 
501 aa  99.8  1e-20  Desulfovibrio vulgaris DP4  Bacteria  normal  0.710197  normal  0.745824 
 
 
-
 
NC_011769  DvMF_2346  response regulator receiver protein  48.31 
 
 
136 aa  99.4  1e-20  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_3286  two component, sigma54 specific, transcriptional regulator, Fis family  38.41 
 
 
458 aa  99  2e-20  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1377  two component, sigma54 specific, transcriptional regulator, Fis family  39.34 
 
 
462 aa  98.6  2e-20  Geobacter lovleyi SZ  Bacteria  normal  0.244526  n/a   
 
 
-
 
NC_009483  Gura_3572  two component, sigma-54 specific, Fis family transcriptional regulator  38.97 
 
 
457 aa  98.6  2e-20  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_1657  two component, sigma54 specific, Fis family transcriptional regulator  42.97 
 
 
459 aa  98.6  2e-20  Desulfovibrio vulgaris DP4  Bacteria  hitchhiker  0.000574549  normal  0.302016 
 
 
-
 
NC_011769  DvMF_2550  multi-sensor signal transduction histidine kinase  44.25 
 
 
685 aa  98.6  2e-20  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009523  RoseRS_0338  response regulator receiver modulated metal dependent phosphohydrolase  38.52 
 
 
513 aa  98.6  2e-20  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.102838 
 
 
-
 
NC_013223  Dret_0868  multi-sensor signal transduction histidine kinase  45.54 
 
 
650 aa  98.2  3e-20  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_0962  two component, sigma54 specific, transcriptional regulator, Fis family  37.68 
 
 
458 aa  97.8  4e-20  Geobacter sp. M21  Bacteria  n/a    normal  0.277353 
 
 
-
 
NC_013173  Dbac_2272  response regulator receiver sensor signal transduction histidine kinase  43.61 
 
 
382 aa  97.8  4e-20  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.275022  n/a   
 
 
-
 
NC_009675  Anae109_1847  two component, sigma54 specific, Fis family transcriptional regulator  36.5 
 
 
459 aa  97.8  4e-20  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.122843  normal  0.436579 
 
 
-
 
NC_011728  BbuZS7_0791  acetoacetate metabolism regulatory protein AtoC (Ornithine/argininedecarboxylase inhibitor)  39.2 
 
 
451 aa  97.8  4e-20  Borrelia burgdorferi ZS7  Bacteria  normal  0.261898  n/a   
 
 
-
 
NC_011769  DvMF_1988  response regulator receiver protein  39.66 
 
 
119 aa  98.2  4e-20  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007517  Gmet_0812  two component, sigma54 specific, Fis family transcriptional regulator  42.86 
 
 
453 aa  97.4  5e-20  Geobacter metallireducens GS-15  Bacteria  normal  0.0257022  hitchhiker  0.00000328811 
 
 
-
 
NC_007519  Dde_0321  response regulator receiver domain-containing protein  41.38 
 
 
122 aa  97.4  6e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1364  two component, sigma54 specific, Fis family transcriptional regulator  38.94 
 
 
485 aa  97.1  7e-20  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2822  response regulator receiver protein  43.97 
 
 
135 aa  97.1  7e-20  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_1960  response regulator transcription factor  39.68 
 
 
471 aa  96.7  9e-20  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1843  two component, sigma54 specific, transcriptional regulator, Fis family  43.36 
 
 
465 aa  96.7  9e-20  Thauera sp. MZ1T  Bacteria  normal  0.798265  n/a   
 
 
-
 
NC_009767  Rcas_1114  response regulator receiver modulated serine phosphatase  41.67 
 
 
391 aa  96.7  9e-20  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_3819  two component, sigma54 specific, transcriptional regulator, Fis family  40.87 
 
 
455 aa  96.3  1e-19  Geobacter bemidjiensis Bem  Bacteria  normal  0.785821  n/a   
 
 
-
 
NC_013223  Dret_2392  two component, sigma54 specific, transcriptional regulator, Fis family  44.04 
 
 
458 aa  96.3  1e-19  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0321511  normal 
 
 
-
 
NC_010424  Daud_0677  response regulator receiver modulated metal dependent phosphohydrolase  36.77 
 
 
343 aa  96.3  1e-19  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.756866  n/a   
 
 
-
 
NC_008751  Dvul_2720  multi-sensor signal transduction histidine kinase  42.48 
 
 
657 aa  96.3  1e-19  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.312815 
 
 
-
 
NC_002939  GSU2915  sigma-54 dependent DNA-binding response regulator  37.78 
 
 
457 aa  95.5  2e-19  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2345  two component signal transduction response regulator  37.59 
 
 
455 aa  95.1  2e-19  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00459366  n/a   
 
 
-
 
NC_007519  Dde_0695  response regulator receiver domain-containing protein  44.26 
 
 
141 aa  95.5  2e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.396926  n/a   
 
 
-
 
NC_009943  Dole_2331  response regulator receiver protein  38.6 
 
 
142 aa  95.5  2e-19  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00000000425244  n/a   
 
 
-
 
NC_007519  Dde_3715  multi-sensor signal transduction histidine kinase  40 
 
 
653 aa  95.5  2e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1992  two component, sigma54 specific, Fis family transcriptional regulator  37.21 
 
 
460 aa  95.5  2e-19  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1341  response regulator receiver protein  41.67 
 
 
301 aa  95.5  2e-19  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0821  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  37.1 
 
 
1139 aa  95.5  2e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.187038 
 
 
-
 
NC_008554  Sfum_3765  two component, sigma54 specific, Fis family transcriptional regulator  37.69 
 
 
463 aa  95.5  2e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  decreased coverage  0.000821276  normal 
 
 
-
 
NC_009253  Dred_1510  two component, sigma54 specific, Fis family transcriptional regulator  37.07 
 
 
448 aa  95.1  3e-19  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_1394  two component, sigma54 specific, Fis family transcriptional regulator  36.76 
 
 
450 aa  94.7  3e-19  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.205793  normal  0.0550645 
 
 
-
 
NC_009675  Anae109_3581  two component, sigma54 specific, Fis family transcriptional regulator  42.97 
 
 
490 aa  94.7  3e-19  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.0374719 
 
 
-
 
NC_009972  Haur_2366  two component, sigma54 specific, Fis family transcriptional regulator  44.74 
 
 
385 aa  94.7  3e-19  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000342445  n/a   
 
 
-
 
NC_013223  Dret_0887  response regulator receiver modulated metal dependent phosphohydrolase  38.4 
 
 
496 aa  94.7  3e-19  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.384329  normal 
 
 
-
 
NC_013132  Cpin_6438  putative two component, sigma54 specific, transcriptional regulator, Fis family  37.93 
 
 
394 aa  94.4  4e-19  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.00615091  normal  0.383003 
 
 
-
 
NC_007519  Dde_0327  response regulator receiver domain-containing protein  41.23 
 
 
142 aa  94.4  4e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1886  two component, sigma54 specific, transcriptional regulator, Fis family  40.71 
 
 
461 aa  94.7  4e-19  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2271  response regulator receiver protein  40.94 
 
 
127 aa  94.4  5e-19  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.420434  n/a   
 
 
-
 
NC_009483  Gura_2914  two component, sigma-54 specific, Fis family transcriptional regulator  39.47 
 
 
459 aa  94.4  5e-19  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_0710  two component, sigma54 specific, Fis family transcriptional regulator  36.72 
 
 
456 aa  94.4  5e-19  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1013  two component, sigma54 specific, transcriptional regulator, Fis family  37.29 
 
 
456 aa  94  6e-19  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.0616674 
 
 
-
 
NC_009483  Gura_3744  putative GAF sensor protein  30.82 
 
 
323 aa  94  6e-19  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2035  response regulator receiver protein  37.9 
 
 
129 aa  94  6e-19  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_4192  two component, sigma-54 specific, Fis family transcriptional regulator  41.74 
 
 
454 aa  94  6e-19  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00227342  n/a   
 
 
-
 
NC_007519  Dde_1685  two component Fis family transcriptional regulator  43.1 
 
 
457 aa  94  7e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00529377  n/a   
 
 
-
 
NC_010644  Emin_1198  response regulator receiver sensor signal transduction histidine kinase  32.35 
 
 
375 aa  94  7e-19  Elusimicrobium minutum Pei191  Bacteria  normal  hitchhiker  0.00328285 
 
 
-
 
NC_008609  Ppro_1179  two component, sigma54 specific, Fis family transcriptional regulator  38.13 
 
 
457 aa  93.6  7e-19  Pelobacter propionicus DSM 2379  Bacteria  normal  0.655382  n/a   
 
 
-
 
NC_009523  RoseRS_3770  response regulator receiver protein  41.27 
 
 
391 aa  93.6  9e-19  Roseiflexus sp. RS-1  Bacteria  normal  unclonable  0.0000112062 
 
 
-
 
NC_009767  Rcas_0845  response regulator receiver modulated metal dependent phosphohydrolase  35.51 
 
 
508 aa  92.8  1e-18  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.903712  hitchhiker  0.00198769 
 
 
-
 
NC_007404  Tbd_0904  two component Fis family transcriptional regulator  41.23 
 
 
454 aa  93.2  1e-18  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.629928  normal 
 
 
-
 
NC_007517  Gmet_0555  two component, sigma54 specific, Fis family transcriptional regulator  37.59 
 
 
457 aa  93.2  1e-18  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_0495  two component, sigma-54 specific, Fis family transcriptional regulator  37.31 
 
 
456 aa  92.8  1e-18  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0009  multi-sensor signal transduction histidine kinase  36.51 
 
 
508 aa  92.8  1e-18  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2269  response regulator receiver protein  43.59 
 
 
130 aa  93.2  1e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.740525  n/a   
 
 
-
 
NC_011769  DvMF_1461  two component, sigma54 specific, transcriptional regulator, Fis family  37.32 
 
 
491 aa  93.2  1e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.750458 
 
 
-
 
NC_010571  Oter_2103  two component, sigma54 specific, Fis family transcriptional regulator  40.83 
 
 
467 aa  93.2  1e-18  Opitutus terrae PB90-1  Bacteria  normal  0.705186  normal  0.234249 
 
 
-
 
NC_008554  Sfum_3111  two component, sigma54 specific, Fis family transcriptional regulator  41.07 
 
 
458 aa  92.8  1e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_3230  flagellar regulatory protein C  36.84 
 
 
446 aa  92.4  2e-18  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009800  EcHS_A2361  acetoacetate metabolism regulatory protein AtoC  35.16 
 
 
461 aa  92  2e-18  Escherichia coli HS  Bacteria  normal  0.18992  n/a   
 
 
-
 
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