Gene Gbem_3819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3819 
Symbol 
ID6780683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp4358638 
End bp4360005 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content61% 
IMG OID642769814 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionYP_002140607 
Protein GI197120180 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.785821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGGCA GCATCCTGAT AGTAGACGAC GAGAAGGGGC AGCGGGACAT ACTCACTGCC 
ATACTCACCA AGATGGGGTA CAACATCCAA ACCGCCTCGG GCGGTGAAGA GGCGCTGCAG
CAACTGCAGC AGGAAGAATT CGACCTCCTC CTCACCGACC TCAAGATGCA GGGAATTTCA
GGGATGGAAC TCATGGAGCG GGTGCTGGCC GACAACCCCT CCCAGTGCGT GGTGATGATG
ACCGCCCACG GCACCATCGA CTCGGCCGTG GAGGCAATGA AGAAAGGGGC TTTCGACTAC
CTGGAAAAGC CCCTGGAGCG CGAGGACTTG ATCCTCACCG TGCAGCGTGC CTTCGAGCGG
ATTGGGCTTT TGCAGGAAAA CAAGGCGCTG CACAAGAAGC TCGCCGAGAC GAAAAGGCTT
CCCAACATGA TCGGAGAGCA CCCGAAGATG CACGAGGTGG TCCGGATCAT CAACAAGATA
GCCCCAACCT CCACGACGGT CCTCATCTAC GGTGAGTCGG GGACGGGGAA GGAACTGGTG
GCGCGCGCCA TCCACGACGG GAGCCCGCGC AGGGACAAGG CCTTTTTCGC CATCAACTGC
GCGGCGATTC CCGACTCGCT GATGGAAAGC GAGCTCTTCG GGCACGAGAA GGGGGCCTTC
ACCGGCGCGG GGACACGGGA GATCGGCCTT TTCGAGGCAG CCGAGGCGGG AACCGTCTTC
CTCGACGAGA TCGGCGAGAT GAACATCGCC ATGCAGGCGA AGCTCTTGCG CGCCATACAG
GAGAAGGAGA TCCGCAGGGT CGGGGGGAAG GTGAACATCC CCGTCGACGT CAGGATCATC
TCCGCCACCA ACAAGGACCT GGAGCAGGAG ACCCGGCGCG GCAACTTCCG CGAGGACCTC
TTCTACAGGC TCAACGTGAT CAGGATACCC CTCCCTCCCC TGAGGGAGCG CGGCAACGAC
ATCGTGACGC TGGCCGACTT CTTCCTGAGG AAGTACAGCG CCTCCTGCGG CATTCCCCTG
AAAGGGATCG CCAAACCGGC GCTGAAGATC CTGCTCGACT ACAACTGGCC CGGCAACGTG
CGGCAACTGG AATCGGTCAT CGAGCGCGGC GTGCTCATGG CCGAAAGCGA ATACATCCAG
CCCGAGGACC TGCCGGCCGA GGTGCACCAC GAGGCCTCCC CTGCGGGAAG CCTCCCCTTC
GACTTCCCGG CCGAGGGGAT ATCCATCGAC AACCTGGAAC GGGACCTGAT CGTCAAGGCG
ATGCAGAGAA CCGACTGGGT CATCGCCAAA GCGGCACCAC TACTCGGTAT GAGCTACAAG
ACGCTGCAAT ACCGGTTGGA AAAATTCGGC ATCGGCAAAC CGGAGTAG
 
Protein sequence
MIGSILIVDD EKGQRDILTA ILTKMGYNIQ TASGGEEALQ QLQQEEFDLL LTDLKMQGIS 
GMELMERVLA DNPSQCVVMM TAHGTIDSAV EAMKKGAFDY LEKPLEREDL ILTVQRAFER
IGLLQENKAL HKKLAETKRL PNMIGEHPKM HEVVRIINKI APTSTTVLIY GESGTGKELV
ARAIHDGSPR RDKAFFAINC AAIPDSLMES ELFGHEKGAF TGAGTREIGL FEAAEAGTVF
LDEIGEMNIA MQAKLLRAIQ EKEIRRVGGK VNIPVDVRII SATNKDLEQE TRRGNFREDL
FYRLNVIRIP LPPLRERGND IVTLADFFLR KYSASCGIPL KGIAKPALKI LLDYNWPGNV
RQLESVIERG VLMAESEYIQ PEDLPAEVHH EASPAGSLPF DFPAEGISID NLERDLIVKA
MQRTDWVIAK AAPLLGMSYK TLQYRLEKFG IGKPE