Gene DvMF_1461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1461 
Symbol 
ID7173370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp1790674 
End bp1792149 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content69% 
IMG OID643539973 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionYP_002435877 
Protein GI218886556 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value0.750458 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGCCC GCATCCTGAT CATCGACGAC GAAGACGGCA TCCGCTTCTC CCTGCGCGGC 
ATTCTCGAAG ACGAAGGCTT CGAGGTGCTC GAGGCTCCCA GCGGCGAGGA CGGCCTGGCC
CTGCTGGCGC GCGAGACGCC CGACCTGGTG TTCCTTGACA TCTGGATGCC CGGCATGGAC
GGACTGGCCG TGCTGGACCA ACTGCACGCC CAGCGCCCCG ACCTGCCGGT CATCATGATC
TCCGGCCACG GCACCATCGA AACGGCGGTC AACGCCATCC GCAAGGGCGC GCACGACTTC
ATCGAAAAGC CCCTCTCGCT GGAAAAGGTG CTCATCGCCG CCCAGCGCGC CCTGGAATAC
GGCGACCTGC GCCGAGAGAA CGAGGCCCTG CGCGACAGCC TGCCCACGGC CCACGCCGAC
GAAATGAACG GTCGTTCGCC GGTGATGGAA ACCCTGCGCG GCCAGATCGC GCGGGTGGCC
CCCACCGACG CCTGGGTGCT GATCACCGGT GAAAACGGCA CCGGCAAGGA ACTGGCGGCG
CGGGCCATCC ACGCGGGCAG CCGCCGGGCC GACCGGCCTC TGGTGGCCGT GAACTGCGCG
GCCATTCCGG AAGAGCTCAT CGAAAGCGAA CTGTTCGGGC ATGAAAAGGG CGCCTTCACC
GGGGCGGATT CGGCCAAGGC GGGCAAGTTC GAAATGGCCC ACAAGGGCAC GCTGTTCCTG
GACGAAATCG GCGACATGAG CCTGAAGACC CAGGCCAAGA TACTGCGCAT ATTGCAGGAA
CAGCAGTTCG AACGGGTGGG CGGCCACCGC ACCATGCGCG TGGACGTGCG CGTCATCGCC
GCCACCAACA AGAACCTGGA GGACGAGATC GCCGCTGGCA CCTTCCGCGA GGACCTGTAC
TACCGGCTGC GGGTGTTCCC GCTGGTGCTG CCCCCCCTGC GCGAACGCGA GGGCGACGTG
CCCCTGCTCA TCGACCTGTT CGCGCAGCGC CTGGCCCGCG ACTACGGCGT GCGCCCGGCC
ACCTTCGCCC CCGATGCGCA GGAAGCGCTG GCGCGCTACC CGTGGCCCGG CAACGTGCGC
GAACTGCGCA ACTTCGTGGA ACGCATGCTC ATCCTGCATG CGGGTCTGGA GGTGACGCGG
TCCATGCTGC CGCCGGAATT CCTGCCCCGG TCCGGCGCGG GCATGAACGG GAGCCCGGGG
GCGGCAACGG CGGCGGGCGG CAGGGCCGCG TCCGGTACCG GGGGAGCCAC CGGCCAGGGG
GGCGATCCGC TTCCGGACCA CCTGCCCGAC ATGGCCGCGC TGCTGGCTCC CGGCATGGAC
CTGAAGGCCG CCCGCGCCGC CTTCGAGGCA CAATACCTGG CCGCGCGGCT TGCGGAGTGC
GGCGGCAACG TCACCCGGCT GGCCGAGGCC GTGGGCATCG AGCGCAGCCA TCTGTACCGC
AAGCTGAAGG GGTACAACAT CCAGACGACC GACTGA
 
Protein sequence
MHARILIIDD EDGIRFSLRG ILEDEGFEVL EAPSGEDGLA LLARETPDLV FLDIWMPGMD 
GLAVLDQLHA QRPDLPVIMI SGHGTIETAV NAIRKGAHDF IEKPLSLEKV LIAAQRALEY
GDLRRENEAL RDSLPTAHAD EMNGRSPVME TLRGQIARVA PTDAWVLITG ENGTGKELAA
RAIHAGSRRA DRPLVAVNCA AIPEELIESE LFGHEKGAFT GADSAKAGKF EMAHKGTLFL
DEIGDMSLKT QAKILRILQE QQFERVGGHR TMRVDVRVIA ATNKNLEDEI AAGTFREDLY
YRLRVFPLVL PPLREREGDV PLLIDLFAQR LARDYGVRPA TFAPDAQEAL ARYPWPGNVR
ELRNFVERML ILHAGLEVTR SMLPPEFLPR SGAGMNGSPG AATAAGGRAA SGTGGATGQG
GDPLPDHLPD MAALLAPGMD LKAARAAFEA QYLAARLAEC GGNVTRLAEA VGIERSHLYR
KLKGYNIQTT D