| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0887 |
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| Symbol | |
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| ID | 8418707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1050396 |
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| End bp | 1051886 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645037457 |
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| Product | response regulator receiver modulated metal dependent phosphohydrolase |
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| Protein accession | YP_003197756 |
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| Protein GI | 258405014 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2206] HD-GYP domain |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.384329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATGG GGCAGCAGCT CGACCGCGAG ACCGTGCTCG TTGTCGATGA TGAAGAAAGT
CTTCGGGATA TTTGCCAGGA TGCCCTTGAA GATGCCGGCT ACAAGGTTAT CCAGGCCAAA
CAGGGTCGAG AGGCTTTGCA GGTCCTGTAC GGCGATACGG AGATGGTCGA TCTGGTGGTT
TCCGATCTGC GGATGCCGGA ACTCAACGGC ATGGAGCTCT TGCAGCGCAT CCGTCAGGAA
CAGATCGACG TCGATTTTCT GATCATGACC GGGTACGGGA CCATTGAGAC CGCTGTGGAG
AGCATGAAGT TGGGGGCGGC GGACTATCTG CCCAAGCCTT TCAATATCAG TCACCTGCTG
CTCAAGGTGG AGAAGGTGCT CCAGGAGCGG CGAGACCGCA AGGAACGGCA CAATCTGAGC
AATCTGGTGC GCTTGCTGAA GTTGAGCCGG GATATCAACA GCCAACTCGA TTTGCCCTCC
CTGCTCAAAG AATTCTTGTT TCACCTGGAA CGCAACTTCG CCCCTCAGGG GGTGGGCCTG
TTTCTCAAAA ATGACGCCGG CGAGCTTGAA CTCAAGACCG AATCCGGGGG GCTGTGGCGC
GAGGACCCCC GAGTGCTTTC CTTGTGCCGC CGGCTCGCCC TGCATGTGCT CGACGCCCGT
GAGCCAAAAT TGGCTGACAA ATATCTCTTG CGTGTGGACA CAGAACTCAA GGGGGTGTGG
AACGAGGATG TCCTGCCCTA TTCCATCATG GCCGCCCCCT TGCTGACGCA GCAAGGGCCA
ACCGGAGTGG TCACCCTGCT CCGCGACGGC CAGGACACCA ATCTCTATAC CCTCGATGAC
CTCCAGCTTT TGACAGTCTT TGCCTCCCAG ACGAGTTCTT CCATCGTCAA CGCCAAACTC
TATGGCCGGA TGCGCCAGAT GAACCTGGAA GTCATCCGCT CTTATGCCCA GGCCGTGGAG
GCCAAGGACA TCTATACCCG GGGCCATTCC GATCGTGTCG CCCAGTACGC TGTGGAACTC
GGGCAAGTGA TCGGCCTTGG GCGCGAAGAA CTCGATCAAC TCCACACTGC CGGACTCTTG
CACGATATCG GCAAGATCGG CATCCCGGAC CGGATTTTGA ACAAGCCATC CGGATTGACG
TCTGATGAAT ACGGGGTCAT GAAACGCCAT CCCGAAGTGG GCTATTCCAT TTTGTCTCAG
GTGGGGACAC TCCAGGAGGT CCTGCCCATT ATTTTTCACC ACCACGAACG CGTGGACGGG
CAGGGGTATC CTAACGGTCT TTCAGGAGAC GAAATCCCGT TTCTCGCCCG GCTGGTCAGT
GTGGTCGACA GCTATGAGGC TATGACCTCG GATCGGGCCT ACCGCAACTC TTTATCCCAG
GAAAAGGTCG TTTCCATTTT GGAACAAAAC GCGGGCAGTC AGTGGGACGA AGAGTTGGTG
CAGCACTGGC TGCGTTATCT TTCCAACGGC AATGGGAACG GGATCGCCTA G
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| Protein sequence | MEMGQQLDRE TVLVVDDEES LRDICQDALE DAGYKVIQAK QGREALQVLY GDTEMVDLVV
SDLRMPELNG MELLQRIRQE QIDVDFLIMT GYGTIETAVE SMKLGAADYL PKPFNISHLL
LKVEKVLQER RDRKERHNLS NLVRLLKLSR DINSQLDLPS LLKEFLFHLE RNFAPQGVGL
FLKNDAGELE LKTESGGLWR EDPRVLSLCR RLALHVLDAR EPKLADKYLL RVDTELKGVW
NEDVLPYSIM AAPLLTQQGP TGVVTLLRDG QDTNLYTLDD LQLLTVFASQ TSSSIVNAKL
YGRMRQMNLE VIRSYAQAVE AKDIYTRGHS DRVAQYAVEL GQVIGLGREE LDQLHTAGLL
HDIGKIGIPD RILNKPSGLT SDEYGVMKRH PEVGYSILSQ VGTLQEVLPI IFHHHERVDG
QGYPNGLSGD EIPFLARLVS VVDSYEAMTS DRAYRNSLSQ EKVVSILEQN AGSQWDEELV
QHWLRYLSNG NGNGIA
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