Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcar_1960 |
Symbol | |
ID | 3724669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter carbinolicus DSM 2380 |
Kingdom | Bacteria |
Replicon accession | NC_007498 |
Strand | + |
Start bp | 2280738 |
End bp | 2282153 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637751561 |
Product | response regulator transcription factor |
Protein accession | YP_357371 |
Protein GI | 77919556 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 63 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACATGCC AACCCTTTTC TGCAGGCTGC ACCATGAAAA ACATATCACA GATTCTGGTT ATCGAAGACG AAGCGGCCAA TCGAGAAGCG ATCGCCCTGC TTCTCGGCAA TGCCGGATAT CAGGTCACCA CAGCTGAAAC CGGTGAAAAA GCCCTTGAAA TCCTGAGCAA AACGCCCTTC GAGGTCATTC TTACCGACCT CTTCCTGCCA GGAGTCAGCG GCATCGAAAT CCTTAAACGC GTCAAAGAGC AATGGCCCTT TACCAACGTT ATCCTGATCA CCGGCAAGGG TTCCGCTGAA TCGGCGGTCG AAGCCATGAA AGAAGGTGCC TTCGACTATA TTACCAAGCC TTTGCATTTC GAAAAGCTCC AGGTGATAAT CGCCAAGGCG GTGGAAAAAA GCCGACTGGT GGCCGAAAAC CTCTATCTGC GACAGCAACT GCGCGGAAAA TATCGGTTCG ACAACATCAT TGGCAACAGC CTGCCCATGC AATATGTTTT TTCTCGCATG GAAAAAGTAC TCAACACCGA TTCCACGATT CTCATTCTCG GCGAATCGGG AACCGGCAAG GAACTTGTCG CCAAAGCCAT TCATTACAAC GGACATCGGA GGGAAAAACC GTTCGTCGCC ATAAATTGCG GGGCGATTCC CGCCGAACTG CTGGAGAGTG AACTCTTCGG TCATGTCCGC GGCGCTTTTA CGGGGGCTGT TGCCGACAAA ACGGGTAAAT TTCAGCAGGC CCACCAGGGC ACGATTTTTC TTGATGAAAT CGGCACGATG CCACTGCATC TGCAGATGAA GCTGCTGCGC GTATTGCAGG AACAGGAAGT CGAGAAAGTC GGTTCTTCCA AAAAAATCAA GCTTGACGTA CGTGTCATCT CGGCCACCAA CTGCAATCTG GAGGAAGAAG TTGAACAAGG CCGGTTTCGG GCGGATCTCT ACTACCGCCT GAACGTTATC CCCATCGCCC TGCCGCCCCT GCGTGAACGA CGCGAGGATA TCGCCCTGCT GGCCCGCTAC TTTCTCCAGA AGACCTGCAC CGAAATGAAC CAACCGCTTA TTTCCATTAC CCCCGGGGCC ATGAATTGCC TGGAAAATTA TCATTGGCCC GGCAATGTGC GCGAACTGGA AAACGTCATC GAGCGAACCG TTACCCTCAC GGACAGCATA GCGATCGGCA AAAGCGATCT GCCGGCCAAT ATCAGCGGCA GTTGCTGCGA AGATGAAGAT CCCCAGATTT CCTGTCCGCG CCTGACCGAA TCCGGCATGG ATATGCCCGA AGTCATCGCC GGTATCGAAC GCTGCCTGAT CAAATCCGCC ATGGGTCTGA GTGGCGGCGT CAAGGCCCGT GCCGCCAGCC TTTTAAATAT CAAACGCACG ACCCTGGTCG AAAAAATCAA ACGCCTGGGC ATTTAA
|
Protein sequence | MTCQPFSAGC TMKNISQILV IEDEAANREA IALLLGNAGY QVTTAETGEK ALEILSKTPF EVILTDLFLP GVSGIEILKR VKEQWPFTNV ILITGKGSAE SAVEAMKEGA FDYITKPLHF EKLQVIIAKA VEKSRLVAEN LYLRQQLRGK YRFDNIIGNS LPMQYVFSRM EKVLNTDSTI LILGESGTGK ELVAKAIHYN GHRREKPFVA INCGAIPAEL LESELFGHVR GAFTGAVADK TGKFQQAHQG TIFLDEIGTM PLHLQMKLLR VLQEQEVEKV GSSKKIKLDV RVISATNCNL EEEVEQGRFR ADLYYRLNVI PIALPPLRER REDIALLARY FLQKTCTEMN QPLISITPGA MNCLENYHWP GNVRELENVI ERTVTLTDSI AIGKSDLPAN ISGSCCEDED PQISCPRLTE SGMDMPEVIA GIERCLIKSA MGLSGGVKAR AASLLNIKRT TLVEKIKRLG I
|
| |