Gene Pcar_1960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_1960 
Symbol 
ID3724669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp2280738 
End bp2282153 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content53% 
IMG OID637751561 
Productresponse regulator transcription factor 
Protein accessionYP_357371 
Protein GI77919556 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones63 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATGCC AACCCTTTTC TGCAGGCTGC ACCATGAAAA ACATATCACA GATTCTGGTT 
ATCGAAGACG AAGCGGCCAA TCGAGAAGCG ATCGCCCTGC TTCTCGGCAA TGCCGGATAT
CAGGTCACCA CAGCTGAAAC CGGTGAAAAA GCCCTTGAAA TCCTGAGCAA AACGCCCTTC
GAGGTCATTC TTACCGACCT CTTCCTGCCA GGAGTCAGCG GCATCGAAAT CCTTAAACGC
GTCAAAGAGC AATGGCCCTT TACCAACGTT ATCCTGATCA CCGGCAAGGG TTCCGCTGAA
TCGGCGGTCG AAGCCATGAA AGAAGGTGCC TTCGACTATA TTACCAAGCC TTTGCATTTC
GAAAAGCTCC AGGTGATAAT CGCCAAGGCG GTGGAAAAAA GCCGACTGGT GGCCGAAAAC
CTCTATCTGC GACAGCAACT GCGCGGAAAA TATCGGTTCG ACAACATCAT TGGCAACAGC
CTGCCCATGC AATATGTTTT TTCTCGCATG GAAAAAGTAC TCAACACCGA TTCCACGATT
CTCATTCTCG GCGAATCGGG AACCGGCAAG GAACTTGTCG CCAAAGCCAT TCATTACAAC
GGACATCGGA GGGAAAAACC GTTCGTCGCC ATAAATTGCG GGGCGATTCC CGCCGAACTG
CTGGAGAGTG AACTCTTCGG TCATGTCCGC GGCGCTTTTA CGGGGGCTGT TGCCGACAAA
ACGGGTAAAT TTCAGCAGGC CCACCAGGGC ACGATTTTTC TTGATGAAAT CGGCACGATG
CCACTGCATC TGCAGATGAA GCTGCTGCGC GTATTGCAGG AACAGGAAGT CGAGAAAGTC
GGTTCTTCCA AAAAAATCAA GCTTGACGTA CGTGTCATCT CGGCCACCAA CTGCAATCTG
GAGGAAGAAG TTGAACAAGG CCGGTTTCGG GCGGATCTCT ACTACCGCCT GAACGTTATC
CCCATCGCCC TGCCGCCCCT GCGTGAACGA CGCGAGGATA TCGCCCTGCT GGCCCGCTAC
TTTCTCCAGA AGACCTGCAC CGAAATGAAC CAACCGCTTA TTTCCATTAC CCCCGGGGCC
ATGAATTGCC TGGAAAATTA TCATTGGCCC GGCAATGTGC GCGAACTGGA AAACGTCATC
GAGCGAACCG TTACCCTCAC GGACAGCATA GCGATCGGCA AAAGCGATCT GCCGGCCAAT
ATCAGCGGCA GTTGCTGCGA AGATGAAGAT CCCCAGATTT CCTGTCCGCG CCTGACCGAA
TCCGGCATGG ATATGCCCGA AGTCATCGCC GGTATCGAAC GCTGCCTGAT CAAATCCGCC
ATGGGTCTGA GTGGCGGCGT CAAGGCCCGT GCCGCCAGCC TTTTAAATAT CAAACGCACG
ACCCTGGTCG AAAAAATCAA ACGCCTGGGC ATTTAA
 
Protein sequence
MTCQPFSAGC TMKNISQILV IEDEAANREA IALLLGNAGY QVTTAETGEK ALEILSKTPF 
EVILTDLFLP GVSGIEILKR VKEQWPFTNV ILITGKGSAE SAVEAMKEGA FDYITKPLHF
EKLQVIIAKA VEKSRLVAEN LYLRQQLRGK YRFDNIIGNS LPMQYVFSRM EKVLNTDSTI
LILGESGTGK ELVAKAIHYN GHRREKPFVA INCGAIPAEL LESELFGHVR GAFTGAVADK
TGKFQQAHQG TIFLDEIGTM PLHLQMKLLR VLQEQEVEKV GSSKKIKLDV RVISATNCNL
EEEVEQGRFR ADLYYRLNVI PIALPPLRER REDIALLARY FLQKTCTEMN QPLISITPGA
MNCLENYHWP GNVRELENVI ERTVTLTDSI AIGKSDLPAN ISGSCCEDED PQISCPRLTE
SGMDMPEVIA GIERCLIKSA MGLSGGVKAR AASLLNIKRT TLVEKIKRLG I