Gene RoseRS_3770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3770 
Symbol 
ID5210752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4714753 
End bp4715928 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content62% 
IMG OID640597366 
Productresponse regulator receiver protein 
Protein accessionYP_001278074 
Protein GI148657869 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000112062 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGATGAAC CGTTGCTATG GGTTGATACC GGCGCGCAAC CGGTGCGACG CATCCTGGTG 
GTTGATGATG ACCCGGACAT CAATCGTCTG CTGCGCGCTC GCCTGACAGC GCGCGGGTAT
GAGGTGTCCA CGGCTGCGAG CGGTGAAGAG GCGCTGGAAC TCCTGTCAGA AACACCTGCC
GATATTGTGT TTCTCGATAT TTCCCTGCCC GGCATCAGCG GTTTGCACAC ACTGGAAGAA
GTGCGTCGGC GCGGATTGGA TACCGCCGTC ATTATGACTA CCGCCTTTGG CTCGGAGCAG
ATCGCAGTCG AGGCATTGCG TCAGGGCGCC AACGACTATC TGCGCAAACC GTTCGAGTCA
GACGAGTTTC GCCGCGTGCT GGAACGCACC GTGCAGCGGC TCGAACTTGA GCGCCAGAAC
CGGGTGCTGC GCCAGCACCT GGAAGCGCAT CACCGCCGTT TGAAGAGCGA ACTGGCGCGC
GCCGCCGAGG TGCAGGCGCG GTTATTGCCG CAAACAGCGC CAGCATTGTC CGGGTTTCAA
CTTGCCGCCG AATGCATCCC CGCCCGTGAT GTCGGCGGCG ACTTTTACGA CTGGCAGCAA
CCTCAGCCGC ATCTGCTCAG TTTCTGGCTC TGTGATGTTA TGGGGAAGGG GCTTGATGCT
GCGCTCCTCA TGGCGACGGT GCGCGCTGTT ATGCGCGCAG TTGTGCGCCA TAGCCCGCCC
GCCGAGGCAA TGCGTTACGT GACCCATGCG CTCATCGATG ACCTGGTGCA GTCAGGACGA
TTCGTCACCC TCTTCCTGGC GCAACTCGAT ACCCGCAGCG GACGCCTCGC CTCGATCGAT
GCCGGGCACG GGTTAGCCTT TGTGCGACGC GCTGACGGAA CGGTCGAGAC GCTCGATGAC
CGGCGAGGTC TGCCGCTTGG CGTACTTCCC GATGAGCAGT ATGATCAGCG CGAAACAGTG
CTCGCTCCGG GGGATGCTCT GATCGTCTAC AGTGATGGGC TGGTCGATGC GCGCGTCGAT
CTCGATCTGA CGCCGCATGT TCTTGCGCGT CATCTCCACG GCGCAACCAG TGCACTTGCG
ATGCTCGACC GCCTGGTGAC GCTGCTGGCG CCGGTGCAGA CGCCGCCCGA CGATATGACA
CTGCTGGTAG TGTATCGGAA AACTGATCAG GGATGA
 
Protein sequence
MDEPLLWVDT GAQPVRRILV VDDDPDINRL LRARLTARGY EVSTAASGEE ALELLSETPA 
DIVFLDISLP GISGLHTLEE VRRRGLDTAV IMTTAFGSEQ IAVEALRQGA NDYLRKPFES
DEFRRVLERT VQRLELERQN RVLRQHLEAH HRRLKSELAR AAEVQARLLP QTAPALSGFQ
LAAECIPARD VGGDFYDWQQ PQPHLLSFWL CDVMGKGLDA ALLMATVRAV MRAVVRHSPP
AEAMRYVTHA LIDDLVQSGR FVTLFLAQLD TRSGRLASID AGHGLAFVRR ADGTVETLDD
RRGLPLGVLP DEQYDQRETV LAPGDALIVY SDGLVDARVD LDLTPHVLAR HLHGATSALA
MLDRLVTLLA PVQTPPDDMT LLVVYRKTDQ G