| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1657 |
|---|
| Symbol | |
|---|
| ID | 4663826 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | - |
|---|
| Start bp | 1964766 |
|---|
| End bp | 1966145 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639819896 |
|---|
| Product | two component, sigma54 specific, Fis family transcriptional regulator |
|---|
| Protein accession | YP_967101 |
|---|
| Protein GI | 120602701 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000574549 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.302016 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCATC TTCTGGTGAT TGATGATGAA CCCGGTCACA GGCTCATGGT GCGTGCCGTC
ATGGAGGATG TGGGCTGGCA TGTGGTCGAG GCCGGTAGCG GCGAAGAAGG GCTTGAACTC
CTCGTCCATG AGCAGGTTCA TGTCGTGCTG CTCGATATGC GCATGCCTGG TATGGACGGG
CAGGAGACGC TTGCCCGCAT CCTCGAGATA CAGCCCGGAC TTCCGGTGGT GATGCTCACC
GCCTATGGCA CCGTGGGGTC GGCCGTAGAA GCCATGAAGT GCGGAGCGTT CGACTACCTC
ACCAAACCCG CCGACAATGA GGAACTGGTG GCCGTGCTTG AGAAGGCATG GGAACATCGC
AGGCTCGTGG TCGAGAACGA AGAGTTGCGA AAGCGGTACG TCGAGAACGA CCCGACCGCC
CCGTTGGTGG GGGCGAGTCA GGTCATGCAC CGCATGCGTG ACTTCATCAG ACAGGCGGGG
CCGAGTGAGG CGACGGTGCT CATCATGGGC GAGTCGGGCA CAGGCAAGGA GCTTATCGCA
CAGGCACTTC ATGATGCCAG CACGCGCGCC CGCCAGCCAC TGGTCAAGGT CAATTGCGCG
GCACTGCCGG GACATCTGCT TGAAAGCGAG TTGTTCGGCT ATGTCAGAGG GGCCTTCACT
GGTGCCGTGA AAGACAAGCC GGGACGTTTT CAACTTGCCC GGGGAGGAAC GCTGTTCCTT
GACGAAATCG GCGAACTTCC GCTCGAGTTG CAGGCCAAGC TGTTACGCGT ACTGCAGGAA
CGCGTGGTCG AACCTCTGGG CGGTGTGCGC CCCGTTTCGG TGGATGTGCG CATCATTGCC
GCGACCAACC GCGACCTGCG CCGCGAAGTG GCGAAGGGAA CGTTCAGGGA GGACTTGTAT
TTCAGGCTCA ACGTCCTTGA AGTCGTCTCG CCACCCTTGC GCAAGCGCAT GGAGGATTTG
CCGCAACTTG TCGAAGAATT GTTGGGGAAG CTTTGCAGAA AGAACAGGAA AAGCATACGC
TGTATCAGTG CCGACTTTTT CGAGGCCCTG TCGCGGCATA GTTGGCCGGG CAATGTCCGT
GAACTTGAGA ACGTCCTTGA GCGGGCCCTC ATCCTGAGCA GGACAGACTC GTTGTCTGCG
GATGCCTTGC CTCCGCAACT GTTCGGAGAT GAACCGCAGG TGGCGGACAT GCAGCAGGAA
CGGCCTGTGG TCGATGATGA TTCGCGACCC TGCTCGCTGG ATGAGGCTGA AAAGGGTGAG
TTGCTTCGTG CACTTGATGT GCACGGAGGG CATCGGGAGA AGACGGCGGA TGCTCTGGGC
ATAAGCCGCA GGACGCTTCA ATACAAGCTC AAGAAATTCG GGCTGACACG ACGAGCCTAG
|
|---|
| Protein sequence | MKHLLVIDDE PGHRLMVRAV MEDVGWHVVE AGSGEEGLEL LVHEQVHVVL LDMRMPGMDG
QETLARILEI QPGLPVVMLT AYGTVGSAVE AMKCGAFDYL TKPADNEELV AVLEKAWEHR
RLVVENEELR KRYVENDPTA PLVGASQVMH RMRDFIRQAG PSEATVLIMG ESGTGKELIA
QALHDASTRA RQPLVKVNCA ALPGHLLESE LFGYVRGAFT GAVKDKPGRF QLARGGTLFL
DEIGELPLEL QAKLLRVLQE RVVEPLGGVR PVSVDVRIIA ATNRDLRREV AKGTFREDLY
FRLNVLEVVS PPLRKRMEDL PQLVEELLGK LCRKNRKSIR CISADFFEAL SRHSWPGNVR
ELENVLERAL ILSRTDSLSA DALPPQLFGD EPQVADMQQE RPVVDDDSRP CSLDEAEKGE
LLRALDVHGG HREKTADALG ISRRTLQYKL KKFGLTRRA
|
|---|
| |