| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3111 |
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| Symbol | |
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| ID | 4458556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 3822404 |
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| End bp | 3823780 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639703882 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_847219 |
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| Protein GI | 116750532 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAGACCA AGCGGACCAT CCTCGTGGTG GATGACGATT TGCACATCCT GGAGGTCATT
GAGGCACGTC TGTCTTCGAT GGATTTCCGG GTGCTCAAGG CGACCAGCGG ACAGGAAGCG
CTCGATCTCC TCAAAGCCGG TGCCGTGGAT CTCGTGATCA CCGATGTACG AATGCCGGGG
ATGGGAGGAA TGGACCTTTT CCACGAGATA CAGACCTTTC ATGCCGGGCT TCCGGTTATC
TTTCTGACGG CCTACGGCAC GATCTCCGAT GCCGTGAAAG CCGTGAAGGC CGGAGCGGTC
GACTATCTCA CGAAGCCTTT CGACGGCCGC GACCTGGTCC TGAAGGTCAA GGAGATTCTG
CGAAAACCCG TCCCCCATCT GCCTGCCCAG GAGACGATTT CCCCGAAACA CGAGTTCTGG
GGCGGTAAAA GCGCCTCCAT GAGAGAGCTC CAGGACCTGG TGGAGCGCAT TGCCCCCAGT
GACGTGAACG TGCTGATTCT GGGCGAGAGC GGGGTGGGCA AGGAACGCGT GGCCCGCCTG
ATTCACCAGA AAGGCCCGAG GCGACTGTTC CCGTTTGTCG TGGTCGATTG CGGCTCCACG
CCGACGGGGC TTCTGGAAAG CGAGCTTTTC GGCCATGTGC GGGGAGCGTT CACTCACGCC
ATCAGAGACA AAAAGGGACT GATCGAAGCG GCGGAGCGGG GCACGCTTTT TCTGGATGAG
ATCGGCAACA TTTCACCCGA AATGCAGGTC CGGCTGCTGC GTTTCCTGGA AGACCGCAAG
ATTCGGCGCA TCGGCGATCT GCGCGAAATA CCGGTGAACT GCCGTGTGAT CGCGGCCACC
AACGTGGACC TGCCCGAGGA CGTCGAGGCC GGCAATTTCA GAGAAGATCT GTACTACCGG
CTCCGAGTCG TCACGCTCAG AATTCCGCCG CTCCGGGAAA GGCGGGAGGA TATTCCGCTG
CTGGCTCAGC ACTTTCTTCA GTCTTTTTGT GAGAGTCAGA ATCTGCCCCC CGTGAGGCTC
CCCCAGGAAA CGATTCGATG GCTCTCCGAA TACCCGTGGC CCGGAAATGT CCGGGAGCTG
AAGAACGCCT TGGAAGCCGG AGCCGTCCTT TGCCGCGAGA GCGTCTTGCG TCCCAGCGAT
CTGCACTTGT CAGGGCTGCC GCATGCGCCC CTGAAGCCGC ACGTATCCGT CGGCGATTCG
CTCTCCCTGG AAGAAAGCGA ACGCAACGCC ATTGTGCGGG CTCTCCAGCA GGCCGGCTGG
GTCCAGAAGG ATGCCGCTCA ACTGCTGGGC ATCAGCCGCA GGGCGATCAA TTACAAAATC
AAGAAATACG GAATCGAATC GAGCGGAAAA CGGGCGAGCG CGGAAGAAAC GGATTGA
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| Protein sequence | MQTKRTILVV DDDLHILEVI EARLSSMDFR VLKATSGQEA LDLLKAGAVD LVITDVRMPG
MGGMDLFHEI QTFHAGLPVI FLTAYGTISD AVKAVKAGAV DYLTKPFDGR DLVLKVKEIL
RKPVPHLPAQ ETISPKHEFW GGKSASMREL QDLVERIAPS DVNVLILGES GVGKERVARL
IHQKGPRRLF PFVVVDCGST PTGLLESELF GHVRGAFTHA IRDKKGLIEA AERGTLFLDE
IGNISPEMQV RLLRFLEDRK IRRIGDLREI PVNCRVIAAT NVDLPEDVEA GNFREDLYYR
LRVVTLRIPP LRERREDIPL LAQHFLQSFC ESQNLPPVRL PQETIRWLSE YPWPGNVREL
KNALEAGAVL CRESVLRPSD LHLSGLPHAP LKPHVSVGDS LSLEESERNA IVRALQQAGW
VQKDAAQLLG ISRRAINYKI KKYGIESSGK RASAEETD
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