More than 300 homologs were found in PanDaTox collection
for query gene Sfum_0657 on replicon NC_008554
Organism: Syntrophobacter fumaroxidans MPOB



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008554  Sfum_0657  response regulator receiver protein  100 
 
 
143 aa  282  1.0000000000000001e-75  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.771795  normal 
 
 
-
 
NC_009943  Dole_1361  response regulator receiver protein  54.29 
 
 
147 aa  142  1e-33  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1357  response regulator receiver protein  48.51 
 
 
144 aa  138  1.9999999999999998e-32  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.48275  n/a   
 
 
-
 
NC_008554  Sfum_0648  response regulator receiver protein  51.2 
 
 
151 aa  134  3.0000000000000003e-31  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0618  response regulator receiver protein  49.61 
 
 
157 aa  127  6e-29  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1350  response regulator receiver protein  48.89 
 
 
147 aa  124  6e-28  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00189482  n/a   
 
 
-
 
NC_009943  Dole_1352  response regulator receiver protein  49.61 
 
 
139 aa  119  9.999999999999999e-27  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00001959  n/a   
 
 
-
 
NC_013173  Dbac_2042  response regulator receiver protein  47.76 
 
 
147 aa  118  1.9999999999999998e-26  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1351  response regulator receiver protein  49.6 
 
 
141 aa  118  1.9999999999999998e-26  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000171187  n/a   
 
 
-
 
NC_013173  Dbac_0314  response regulator receiver protein  55.56 
 
 
131 aa  118  1.9999999999999998e-26  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0234873  n/a   
 
 
-
 
NC_013173  Dbac_1807  response regulator receiver protein  47.11 
 
 
139 aa  117  7e-26  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0632  response regulator receiver protein  47.58 
 
 
135 aa  116  9.999999999999999e-26  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_0313  response regulator receiver protein  43.48 
 
 
143 aa  114  3.9999999999999997e-25  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0254543  n/a   
 
 
-
 
NC_011769  DvMF_1988  response regulator receiver protein  49.57 
 
 
119 aa  114  6e-25  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011769  DvMF_1991  response regulator receiver protein  51.28 
 
 
153 aa  114  6e-25  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_0403  response regulator receiver sensor signal transduction histidine kinase  43.8 
 
 
374 aa  112  2.0000000000000002e-24  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.150899 
 
 
-
 
NC_008751  Dvul_0173  response regulator receiver protein  46.96 
 
 
121 aa  111  3e-24  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2272  response regulator receiver sensor signal transduction histidine kinase  44.03 
 
 
382 aa  108  2.0000000000000002e-23  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.275022  n/a   
 
 
-
 
NC_009943  Dole_1362  response regulator receiver protein  39.01 
 
 
159 aa  107  8.000000000000001e-23  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2037  response regulator receiver protein  42.11 
 
 
120 aa  107  8.000000000000001e-23  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0407  response regulator receiver protein  44.35 
 
 
128 aa  106  9.000000000000001e-23  Desulfovibrio vulgaris DP4  Bacteria  normal  0.627834  normal  0.12665 
 
 
-
 
NC_011769  DvMF_1769  response regulator receiver protein  44.83 
 
 
129 aa  106  1e-22  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011769  DvMF_1773  response regulator receiver sensor signal transduction histidine kinase  41.48 
 
 
408 aa  105  2e-22  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_2331  response regulator receiver protein  44.63 
 
 
142 aa  105  2e-22  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00000000425244  n/a   
 
 
-
 
NC_007519  Dde_0695  response regulator receiver domain-containing protein  45.53 
 
 
141 aa  104  4e-22  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.396926  n/a   
 
 
-
 
NC_009943  Dole_2739  two component, sigma54 specific, Fis family transcriptional regulator  42.19 
 
 
451 aa  103  1e-21  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.693002  n/a   
 
 
-
 
NC_011830  Dhaf_4779  two component, sigma54 specific, transcriptional regulator, Fis family  42.99 
 
 
494 aa  102  1e-21  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1358  response regulator receiver protein  45.69 
 
 
144 aa  102  1e-21  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.107991  n/a   
 
 
-
 
NC_011883  Ddes_1566  response regulator receiver protein  42.98 
 
 
126 aa  102  2e-21  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1360  response regulator receiver sensor signal transduction histidine kinase  45.54 
 
 
403 aa  101  3e-21  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0018  response regulator receiver protein  42.98 
 
 
135 aa  100  5e-21  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  decreased coverage  0.00000218096  n/a   
 
 
-
 
NC_011883  Ddes_0816  response regulator receiver protein  43.55 
 
 
157 aa  100  5e-21  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1662  response regulator receiver sensor signal transduction histidine kinase  41.43 
 
 
396 aa  100  7e-21  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_1797  two component, sigma54 specific, transcriptional regulator, Fis family  36.62 
 
 
461 aa  100  9e-21  Rhodothermus marinus DSM 4252  Bacteria  normal  0.774224  n/a   
 
 
-
 
NC_012918  GM21_2551  response regulator receiver sensor signal transduction histidine kinase  41.43 
 
 
396 aa  99.4  1e-20  Geobacter sp. M21  Bacteria  n/a    hitchhiker  1.14529e-19 
 
 
-
 
NC_009483  Gura_2932  response regulator receiver sensor signal transduction histidine kinase  41.22 
 
 
394 aa  98.6  3e-20  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000651793  n/a   
 
 
-
 
NC_013173  Dbac_2666  two component, sigma54 specific, transcriptional regulator, Fis family  45.13 
 
 
459 aa  98.6  3e-20  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2245  two component, sigma54 specific, transcriptional regulator, Fis family  40 
 
 
460 aa  97.8  4e-20  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0327  response regulator receiver domain-containing protein  43.8 
 
 
142 aa  97.1  8e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0821  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  38.97 
 
 
1139 aa  96.7  1e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.187038 
 
 
-
 
NC_009483  Gura_3572  two component, sigma-54 specific, Fis family transcriptional regulator  39.69 
 
 
457 aa  95.9  2e-19  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1348  response regulator receiver protein  40 
 
 
173 aa  95.9  2e-19  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1119  sensor histidine kinase/response regulator  40 
 
 
420 aa  95.1  3e-19  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1377  two component, sigma54 specific, transcriptional regulator, Fis family  38.28 
 
 
462 aa  95.1  3e-19  Geobacter lovleyi SZ  Bacteria  normal  0.244526  n/a   
 
 
-
 
NC_007519  Dde_0321  response regulator receiver domain-containing protein  42.24 
 
 
122 aa  94.7  4e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1992  two component, sigma54 specific, Fis family transcriptional regulator  40.16 
 
 
460 aa  94.4  4e-19  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_2080  two component, sigma54 specific, transcriptional regulator, Fis family  45.54 
 
 
461 aa  94.4  4e-19  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_1800  two component, sigma54 specific, transcriptional regulator, Fis family  39.81 
 
 
464 aa  94  7e-19  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.458412  n/a   
 
 
-
 
NC_007519  Dde_0692  response regulator receiver domain-containing protein  37.19 
 
 
145 aa  93.6  8e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.000176776  n/a   
 
 
-
 
NC_011662  Tmz1t_1843  two component, sigma54 specific, transcriptional regulator, Fis family  40.57 
 
 
465 aa  93.6  8e-19  Thauera sp. MZ1T  Bacteria  normal  0.798265  n/a   
 
 
-
 
NC_011145  AnaeK_1886  two component, sigma54 specific, transcriptional regulator, Fis family  41.23 
 
 
461 aa  93.6  8e-19  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_1394  two component, sigma54 specific, Fis family transcriptional regulator  38.69 
 
 
450 aa  93.6  9e-19  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.205793  normal  0.0550645 
 
 
-
 
NC_002967  TDE1969  sigma-54 dependent transcriptional regulator/response regulator  46.15 
 
 
473 aa  92.8  1e-18  Treponema denticola ATCC 35405  Bacteria  normal  0.440374  n/a   
 
 
-
 
NC_009943  Dole_2335  response regulator receiver protein  42.45 
 
 
411 aa  93.2  1e-18  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.0000388714  n/a   
 
 
-
 
NC_007498  Pcar_2015  two component hybrid sensor response regulator  38.35 
 
 
391 aa  92  2e-18  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0776  two component, sigma54 specific, Fis family transcriptional regulator  42.31 
 
 
454 aa  92.4  2e-18  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_4293  two component transcriptional regulator  37.88 
 
 
224 aa  92  2e-18  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.0000000000934276  n/a   
 
 
-
 
NC_007517  Gmet_2677  response regulator receiver sensor signal transduction histidine kinase  40.88 
 
 
395 aa  92.4  2e-18  Geobacter metallireducens GS-15  Bacteria  normal  0.971959  normal  0.344308 
 
 
-
 
NC_008554  Sfum_0620  response regulator receiver protein  41.73 
 
 
142 aa  92  2e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_0710  two component, sigma54 specific, Fis family transcriptional regulator  37.88 
 
 
456 aa  92  2e-18  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0150  response regulator receiver protein  50.43 
 
 
134 aa  92.8  2e-18  Desulfovibrio vulgaris DP4  Bacteria  normal  0.89872  normal  0.680282 
 
 
-
 
NC_013061  Phep_2510  sigma-54 factor interaction domain-containing protein  41.04 
 
 
448 aa  92  3e-18  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_0259  two component signal transduction response regulator  36.84 
 
 
513 aa  91.7  3e-18  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0853  two component, sigma54 specific, transcriptional regulator, Fis family  41.38 
 
 
459 aa  91.3  4e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.0538681  n/a   
 
 
-
 
NC_007404  Tbd_0904  two component Fis family transcriptional regulator  39.29 
 
 
454 aa  91.3  4e-18  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.629928  normal 
 
 
-
 
NC_013173  Dbac_2035  response regulator receiver protein  42.24 
 
 
129 aa  91.3  4e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1951  two component, sigma54 specific, Fis family transcriptional regulator  44.25 
 
 
470 aa  91.7  4e-18  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.516267  normal 
 
 
-
 
NC_009675  Anae109_3581  two component, sigma54 specific, Fis family transcriptional regulator  44.25 
 
 
490 aa  90.9  5e-18  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.0374719 
 
 
-
 
NC_007760  Adeh_2009  two component, sigma54 specific, Fis family transcriptional regulator  37.59 
 
 
463 aa  90.9  5e-18  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3335  two component, sigma-54 specific, Fis family transcriptional regulator  38.46 
 
 
458 aa  90.9  5e-18  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_1657  two component, sigma54 specific, Fis family transcriptional regulator  39.39 
 
 
459 aa  90.9  5e-18  Desulfovibrio vulgaris DP4  Bacteria  hitchhiker  0.000574549  normal  0.302016 
 
 
-
 
NC_011146  Gbem_1988  two component, sigma54 specific, transcriptional regulator, Fis family  35.04 
 
 
509 aa  90.9  6e-18  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1971  two component, sigma54 specific, transcriptional regulator, Fis family  43.36 
 
 
473 aa  90.5  6e-18  Anaeromyxobacter sp. K  Bacteria  normal  0.0887215  n/a   
 
 
-
 
NC_011891  A2cp1_2056  two component, sigma54 specific, transcriptional regulator, Fis family  43.36 
 
 
473 aa  90.5  6e-18  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.732718  n/a   
 
 
-
 
NC_011769  DvMF_1461  two component, sigma54 specific, transcriptional regulator, Fis family  39.52 
 
 
491 aa  90.5  7e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.750458 
 
 
-
 
NC_011145  AnaeK_1869  two component, sigma54 specific, transcriptional regulator, Fis family  40.68 
 
 
464 aa  90.5  7e-18  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0633  response regulator receiver protein  40.5 
 
 
133 aa  90.5  7e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.546392  normal 
 
 
-
 
NC_007517  Gmet_0812  two component, sigma54 specific, Fis family transcriptional regulator  38.64 
 
 
453 aa  90.5  8e-18  Geobacter metallireducens GS-15  Bacteria  normal  0.0257022  hitchhiker  0.00000328811 
 
 
-
 
NC_009441  Fjoh_5047  two component, sigma54 specific, Fis family transcriptional regulator  38.02 
 
 
387 aa  90.1  8e-18  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0897789  n/a   
 
 
-
 
NC_007760  Adeh_1908  two component, sigma54 specific, Fis family transcriptional regulator  43.36 
 
 
473 aa  90.1  8e-18  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0451  DNA-binding response regulator  39.39 
 
 
224 aa  90.1  9e-18  Geobacter sulfurreducens PCA  Bacteria  normal  0.313098  n/a   
 
 
-
 
NC_009523  RoseRS_1088  two component transcriptional regulator  36.51 
 
 
264 aa  90.1  9e-18  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.237646 
 
 
-
 
NC_002939  GSU0811  nitrogen regulation protein NtrX  43 
 
 
456 aa  89.7  1e-17  Geobacter sulfurreducens PCA  Bacteria  normal  0.686874  n/a   
 
 
-
 
NC_011206  Lferr_0025  two component, sigma54 specific, transcriptional regulator, Fis family  40.78 
 
 
468 aa  89.7  1e-17  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.0807039 
 
 
-
 
NC_012918  GM21_0962  two component, sigma54 specific, transcriptional regulator, Fis family  39.82 
 
 
458 aa  89.4  1e-17  Geobacter sp. M21  Bacteria  n/a    normal  0.277353 
 
 
-
 
NC_011769  DvMF_2334  response regulator receiver protein  40.5 
 
 
151 aa  89.7  1e-17  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_012917  PC1_0136  DNA-binding transcriptional regulator CpxR  42.02 
 
 
232 aa  89.4  1e-17  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_1685  two component Fis family transcriptional regulator  40.87 
 
 
457 aa  89.7  1e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00529377  n/a   
 
 
-
 
NC_011761  AFE_0024  nitrogen assimilation regulatory protein NtrX, putative  40.78 
 
 
468 aa  89.7  1e-17  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_008531  LEUM_1950  DNA-binding response regulator  43.33 
 
 
235 aa  90.1  1e-17  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.100456  n/a   
 
 
-
 
NC_008554  Sfum_1934  two component, sigma54 specific, Fis family transcriptional regulator  39.32 
 
 
476 aa  89.7  1e-17  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.808753  normal  0.132653 
 
 
-
 
NC_008609  Ppro_1655  two component, sigma54 specific, Fis family transcriptional regulator  41.67 
 
 
462 aa  89.4  1e-17  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.000025661  n/a   
 
 
-
 
NC_009632  SaurJH1_1784  alkaline phosphatase synthesis transcriptional regulatory protein  38.21 
 
 
234 aa  89  2e-17  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.561076  n/a   
 
 
-
 
NC_003909  BCE_2564  DNA-binding response regulator  35.17 
 
 
231 aa  88.6  2e-17  Bacillus cereus ATCC 10987  Bacteria  normal  0.0589521  n/a   
 
 
-
 
NC_006274  BCZK2302  DNA-binding response regulator  35.17 
 
 
231 aa  89.4  2e-17  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2269  response regulator receiver protein  42.34 
 
 
130 aa  89.4  2e-17  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.740525  n/a   
 
 
-
 
NC_009943  Dole_1341  response regulator receiver protein  40.68 
 
 
301 aa  89  2e-17  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_08281  two component, sigma54 specific, transcriptional regulator, Fis family protein  37.31 
 
 
388 aa  89.4  2e-17  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3286  two component, sigma54 specific, transcriptional regulator, Fis family  39.82 
 
 
458 aa  89.4  2e-17  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0439  two component transcriptional regulator  40.15 
 
 
225 aa  89  2e-17  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.000000000223011  n/a   
 
 
-
 
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