Gene Oter_2103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_2103 
Symbol 
ID6206644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp2695145 
End bp2696548 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content66% 
IMG OID641691754 
Producttwo component, sigma54 specific, Fis family transcriptional regulator 
Protein accessionYP_001818986 
Protein GI182413920 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.705186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.234249 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCCGA GCGTTTTGAT CGTCGATGAC GAAAAGCACA CGCGCGAGGG TTTGCAGCAG 
GCGCTGGTCG ACAGCTACGA CGTGTCACTG GCTGCGAGCG CGGACGAGGC GTTCAACCTG
ATGGATGCGC AGCCGTTCGA CGTGATCGTC ACGGACCTGC GCATGCCGGG CAAATCGGGG
CTGAAGGTGA TCGACAAGGC GCTGGCGCAG CCGAACCGGC CCGCCGTGCT GATGATGACC
GCTTACGGCA ACATCGAGAC GGCGGTCGAG GCGATGAAGC GCGGCGCGGT GGATTTCCTG
ACCAAGCCGG TGAACATCGA GCGCCTGGAG GTGCTGATCC AGCGGGCGCT GAAGGCCAAG
ACGCTCGAGG TCGAGGTGAA GCAGCTGCAC GAGCGGCTCG ACGAGAAGTT CAGTTTCGAA
GGCATCATCG GCAACTCGCC CAAGCTGCAC GAAGTCATCG ACCGGGTGAA ACTGGTCGCG
CCGTCGCGCG CGACGATCCT GATCGAAGGC GAGTCCGGCA CCGGCAAGGA GCTGATCGCC
CAGGCGATTC ACCAGTCGAG CTCGCGGTCG CGCGGGCCGT TCCTCGCGGT GCACTGCGCG
GCGCTGTCGG AGAACCTGCT CGAGAGCGAG CTGTTCGGCC ACGAGCGAGG CTCGTTCACC
GGCGCCACGG AACGACGGAT CGGCCGGTTC GAGTCCGCCG ACGGCGGCAC GCTGTTTCTT
GACGAAATCG GCGAGATATC CGCGTCGACG CAGGTGAAGC TGCTGCGGTT CCTGGAGACG
AAATCGATCG AGCGCGTCGG CGGTTCCAAG CCGATCGATC TCGATGTGCG GCTGGTGGCG
GCAACGAACC GCACTCTCGA ACAACTTGTG CGCGACGGGA AGTTCCGCGA GGACCTTTTC
TTCCGGCTGA ACGTGGTGCG AATCACCATG CCGCCGCTGC GCGAGCGCGC GGAGGACGTT
CCACTGCTGC TCGGGCACTA CATCACGGCG TTCTCCGAGG AAAACGGCGT CCCGCCGCTG
ACGATCGAGC CGGGCGCGCT GGCCACGCTG CAGGCGTATC CGTGGCCCGG CAACATCCGC
GAGCTGCGGA ACTTTTGTGA GAACGCCGTG GTGTTGCGGC GCGGCCGCAG CCTCTCGGAA
TACGACCTCG AACCGAGATA CCGGGACGCC ACCCTGGCGG GCGCGACCGG CCCGGCACCG
ACGCCGGGCG CGCCGGGCTC GACCGTACTC GGCGGCGCGG TGCCGACGTC GTTCTCCGTC
GAGGAAAACG AAAAGCGACT GTTGCGAGAG GCGCTGATCA AGTCGCGCGG CAACCGCACC
AAGGCCGCCG AGCTGATGGG CATCAGCCGG CGCACGCTGC ATCGCAAGAT CGCGCAGTGG
CCCGAGCTCG ACGTCGTGGA CTAG
 
Protein sequence
MVPSVLIVDD EKHTREGLQQ ALVDSYDVSL AASADEAFNL MDAQPFDVIV TDLRMPGKSG 
LKVIDKALAQ PNRPAVLMMT AYGNIETAVE AMKRGAVDFL TKPVNIERLE VLIQRALKAK
TLEVEVKQLH ERLDEKFSFE GIIGNSPKLH EVIDRVKLVA PSRATILIEG ESGTGKELIA
QAIHQSSSRS RGPFLAVHCA ALSENLLESE LFGHERGSFT GATERRIGRF ESADGGTLFL
DEIGEISAST QVKLLRFLET KSIERVGGSK PIDLDVRLVA ATNRTLEQLV RDGKFREDLF
FRLNVVRITM PPLRERAEDV PLLLGHYITA FSEENGVPPL TIEPGALATL QAYPWPGNIR
ELRNFCENAV VLRRGRSLSE YDLEPRYRDA TLAGATGPAP TPGAPGSTVL GGAVPTSFSV
EENEKRLLRE ALIKSRGNRT KAAELMGISR RTLHRKIAQW PELDVVD