Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_2103 |
Symbol | |
ID | 6206644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 2695145 |
End bp | 2696548 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641691754 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_001818986 |
Protein GI | 182413920 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.705186 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.234249 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGCCGA GCGTTTTGAT CGTCGATGAC GAAAAGCACA CGCGCGAGGG TTTGCAGCAG GCGCTGGTCG ACAGCTACGA CGTGTCACTG GCTGCGAGCG CGGACGAGGC GTTCAACCTG ATGGATGCGC AGCCGTTCGA CGTGATCGTC ACGGACCTGC GCATGCCGGG CAAATCGGGG CTGAAGGTGA TCGACAAGGC GCTGGCGCAG CCGAACCGGC CCGCCGTGCT GATGATGACC GCTTACGGCA ACATCGAGAC GGCGGTCGAG GCGATGAAGC GCGGCGCGGT GGATTTCCTG ACCAAGCCGG TGAACATCGA GCGCCTGGAG GTGCTGATCC AGCGGGCGCT GAAGGCCAAG ACGCTCGAGG TCGAGGTGAA GCAGCTGCAC GAGCGGCTCG ACGAGAAGTT CAGTTTCGAA GGCATCATCG GCAACTCGCC CAAGCTGCAC GAAGTCATCG ACCGGGTGAA ACTGGTCGCG CCGTCGCGCG CGACGATCCT GATCGAAGGC GAGTCCGGCA CCGGCAAGGA GCTGATCGCC CAGGCGATTC ACCAGTCGAG CTCGCGGTCG CGCGGGCCGT TCCTCGCGGT GCACTGCGCG GCGCTGTCGG AGAACCTGCT CGAGAGCGAG CTGTTCGGCC ACGAGCGAGG CTCGTTCACC GGCGCCACGG AACGACGGAT CGGCCGGTTC GAGTCCGCCG ACGGCGGCAC GCTGTTTCTT GACGAAATCG GCGAGATATC CGCGTCGACG CAGGTGAAGC TGCTGCGGTT CCTGGAGACG AAATCGATCG AGCGCGTCGG CGGTTCCAAG CCGATCGATC TCGATGTGCG GCTGGTGGCG GCAACGAACC GCACTCTCGA ACAACTTGTG CGCGACGGGA AGTTCCGCGA GGACCTTTTC TTCCGGCTGA ACGTGGTGCG AATCACCATG CCGCCGCTGC GCGAGCGCGC GGAGGACGTT CCACTGCTGC TCGGGCACTA CATCACGGCG TTCTCCGAGG AAAACGGCGT CCCGCCGCTG ACGATCGAGC CGGGCGCGCT GGCCACGCTG CAGGCGTATC CGTGGCCCGG CAACATCCGC GAGCTGCGGA ACTTTTGTGA GAACGCCGTG GTGTTGCGGC GCGGCCGCAG CCTCTCGGAA TACGACCTCG AACCGAGATA CCGGGACGCC ACCCTGGCGG GCGCGACCGG CCCGGCACCG ACGCCGGGCG CGCCGGGCTC GACCGTACTC GGCGGCGCGG TGCCGACGTC GTTCTCCGTC GAGGAAAACG AAAAGCGACT GTTGCGAGAG GCGCTGATCA AGTCGCGCGG CAACCGCACC AAGGCCGCCG AGCTGATGGG CATCAGCCGG CGCACGCTGC ATCGCAAGAT CGCGCAGTGG CCCGAGCTCG ACGTCGTGGA CTAG
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Protein sequence | MVPSVLIVDD EKHTREGLQQ ALVDSYDVSL AASADEAFNL MDAQPFDVIV TDLRMPGKSG LKVIDKALAQ PNRPAVLMMT AYGNIETAVE AMKRGAVDFL TKPVNIERLE VLIQRALKAK TLEVEVKQLH ERLDEKFSFE GIIGNSPKLH EVIDRVKLVA PSRATILIEG ESGTGKELIA QAIHQSSSRS RGPFLAVHCA ALSENLLESE LFGHERGSFT GATERRIGRF ESADGGTLFL DEIGEISAST QVKLLRFLET KSIERVGGSK PIDLDVRLVA ATNRTLEQLV RDGKFREDLF FRLNVVRITM PPLRERAEDV PLLLGHYITA FSEENGVPPL TIEPGALATL QAYPWPGNIR ELRNFCENAV VLRRGRSLSE YDLEPRYRDA TLAGATGPAP TPGAPGSTVL GGAVPTSFSV EENEKRLLRE ALIKSRGNRT KAAELMGISR RTLHRKIAQW PELDVVD
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