Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3230 |
Symbol | flrC |
ID | 1170922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3368834 |
End bp | 3370174 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637345045 |
Product | flagellar regulatory protein C |
Protein accession | NP_718785 |
Protein GI | 24374742 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGAAG CCAAATTGCT CTTAGTTGAA GATGATGCGT CCCTGCGTGA AGCATTGCTC GATACGTTAA TGTTGGCGCA ATACGATTGT ATCGATGTGG CATCCGGTGA AGAGGCCATT CTTGCTCTAA AACAACATCA ATTTGATCTG GTGATTAGCG ATGTACAAAT GCCGGGGATT GGTGGCTTAG GCTTATTAAA TTATTTACAG CAGCATCATC CCAAGTTGCC CGTGTTGTTA ATGACGGCTT ACGCCACGAT TGGCAGTGCG GTAAGTGCTA TCAAGCTGGG TGCGGTGGAT TATCTGGCAA AACCCTTTGC CCCTGAGGTG TTATTAAACC AAGTATCCCG TTATTTACCG CTAAAACAAA ATCGCGATCA ACCTGTCGTG GCAGATGAAA AGAGCCTCTC GTTATTGTCC TTGGCGCAAC GGGTTGCAGC CTCAGATGCT TCAGTGATGA TCCTTGGGCC AAGTGGTTCA GGTAAAGAAG TGTTGGCGCG TTACATTCAT CAACACAGCA GTCGGGCTGA AGAGGCCTTT GTGGCAATCA ACTGCGCAGC AATCCCCGAA AATATGCTTG AGGCGACATT ATTCGGCTAT GAAAAGGGTG CCTTTACTGG TGCTTATCAG GCTTGCCCTG GTAAGTTTGA ACAGGCGCAG GGCGGTACCT TATTGCTCGA TGAAATTTCA GAAATGGATT TAGGTCTTCA GGCGAAACTA CTGCGTGTGT TACAAGAACG TGAAGTGGAA CGTTTAGGGG GGCGCAAAAC CATTAAGCTG GATGTGAGAG TGCTGGCAAC CTCAAATCGG GATTTAAAAG CTGTAGTTGC CGCAGGGCAA TTTAGGGAAG ATCTCTATTA TCGTATAAAT GTATTTCCAC TCACTTGGCC AGCACTGAAT CAACGGCCAG CGGACATCTT ACCCCTTGCG AGGCATTTGC TTACAAAACA CGCAAAGGCG CTTAATGTCG TTGATTTACC TGAGTTTGAT GATGCCGCTT GCCGCCGTTT ACTTAGCCAC CGTTGGCCAG GTAACGTACG AGAGCTGGAT AACGTTGTGC AGCGAGCGTT AATTTTACGC GCGGGGGCGT TGATCACTGC CAATGACATT ATTATCGATG CTCAAGATGT ACCGCTAACA TCCGATGACG CCGAATATAT GAGCGAGCCT GAAGGTTTAG GTGAAGAGTT AAAGGCGCAG GAGCATGTGA TCATTCTCGA AACCTTAGTT CAATGCCAAG GCAGCCGTAA GTTGGTTGCT GAGAAACTGG GGATCAGCGC GCGCACCTTA AGATACAAAA TGGCCAGAAT GCGGGATATG GGTATTCAAT TGCCTAGCTA A
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Protein sequence | MSEAKLLLVE DDASLREALL DTLMLAQYDC IDVASGEEAI LALKQHQFDL VISDVQMPGI GGLGLLNYLQ QHHPKLPVLL MTAYATIGSA VSAIKLGAVD YLAKPFAPEV LLNQVSRYLP LKQNRDQPVV ADEKSLSLLS LAQRVAASDA SVMILGPSGS GKEVLARYIH QHSSRAEEAF VAINCAAIPE NMLEATLFGY EKGAFTGAYQ ACPGKFEQAQ GGTLLLDEIS EMDLGLQAKL LRVLQEREVE RLGGRKTIKL DVRVLATSNR DLKAVVAAGQ FREDLYYRIN VFPLTWPALN QRPADILPLA RHLLTKHAKA LNVVDLPEFD DAACRRLLSH RWPGNVRELD NVVQRALILR AGALITANDI IIDAQDVPLT SDDAEYMSEP EGLGEELKAQ EHVIILETLV QCQGSRKLVA EKLGISARTL RYKMARMRDM GIQLPS
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