More than 300 homologs were found in PanDaTox collection
for query gene Dvul_0407 on replicon NC_008751
Organism: Desulfovibrio vulgaris DP4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008751  Dvul_0407  response regulator receiver protein  100 
 
 
128 aa  252  1.0000000000000001e-66  Desulfovibrio vulgaris DP4  Bacteria  normal  0.627834  normal  0.12665 
 
 
-
 
NC_011769  DvMF_1769  response regulator receiver protein  84.25 
 
 
129 aa  214  2.9999999999999998e-55  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_2269  response regulator receiver protein  59.32 
 
 
130 aa  144  4.0000000000000006e-34  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.740525  n/a   
 
 
-
 
NC_007519  Dde_0321  response regulator receiver domain-containing protein  61.02 
 
 
122 aa  140  7e-33  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1807  response regulator receiver protein  55.08 
 
 
139 aa  124  3e-28  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2335  response regulator receiver protein  54.78 
 
 
411 aa  125  3e-28  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.0000388714  n/a   
 
 
-
 
NC_011883  Ddes_0816  response regulator receiver protein  52.14 
 
 
157 aa  123  9e-28  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1772  response regulator receiver protein  52.94 
 
 
151 aa  122  2e-27  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008554  Sfum_0654  response regulator receiver protein  56.14 
 
 
413 aa  121  4e-27  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.113697  normal 
 
 
-
 
NC_007519  Dde_0328  response regulator receiver domain-containing protein  52.1 
 
 
406 aa  120  6e-27  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.918345  n/a   
 
 
-
 
NC_008751  Dvul_0404  response regulator receiver protein  52.1 
 
 
151 aa  120  8e-27  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.134088 
 
 
-
 
NC_008554  Sfum_0656  response regulator receiver protein  52.17 
 
 
129 aa  119  9.999999999999999e-27  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.663964  normal 
 
 
-
 
NC_008554  Sfum_0648  response regulator receiver protein  51.3 
 
 
151 aa  119  1.9999999999999998e-26  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1350  response regulator receiver protein  50 
 
 
147 aa  116  7.999999999999999e-26  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00189482  n/a   
 
 
-
 
NC_008554  Sfum_0632  response regulator receiver protein  50 
 
 
135 aa  115  1.9999999999999998e-25  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2271  response regulator receiver protein  50 
 
 
127 aa  114  3e-25  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.420434  n/a   
 
 
-
 
NC_013173  Dbac_0314  response regulator receiver protein  47.93 
 
 
131 aa  114  6e-25  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0234873  n/a   
 
 
-
 
NC_008751  Dvul_0173  response regulator receiver protein  49.15 
 
 
121 aa  113  8.999999999999998e-25  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1988  response regulator receiver protein  49.57 
 
 
119 aa  109  2.0000000000000002e-23  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_2331  response regulator receiver protein  45.69 
 
 
142 aa  107  8.000000000000001e-23  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00000000425244  n/a   
 
 
-
 
NC_009943  Dole_1360  response regulator receiver sensor signal transduction histidine kinase  48.65 
 
 
403 aa  105  1e-22  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2042  response regulator receiver protein  45.38 
 
 
147 aa  105  2e-22  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0814  response regulator receiver protein  48.36 
 
 
132 aa  104  5e-22  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1357  response regulator receiver protein  46.96 
 
 
144 aa  103  6e-22  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.48275  n/a   
 
 
-
 
NC_008554  Sfum_0618  response regulator receiver protein  43.22 
 
 
157 aa  103  9e-22  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_0403  response regulator receiver sensor signal transduction histidine kinase  48.7 
 
 
374 aa  103  1e-21  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.150899 
 
 
-
 
NC_009943  Dole_1361  response regulator receiver protein  47.83 
 
 
147 aa  102  2e-21  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_1566  response regulator receiver protein  43.8 
 
 
126 aa  102  2e-21  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0324  response regulator receiver domain-containing protein  47.27 
 
 
127 aa  101  4e-21  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.581793  n/a   
 
 
-
 
NC_009943  Dole_1351  response regulator receiver protein  44.07 
 
 
141 aa  100  8e-21  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000171187  n/a   
 
 
-
 
NC_013173  Dbac_0313  response regulator receiver protein  43.7 
 
 
143 aa  100  1e-20  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0254543  n/a   
 
 
-
 
NC_009943  Dole_1358  response regulator receiver protein  45.3 
 
 
144 aa  99.4  1e-20  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.107991  n/a   
 
 
-
 
NC_011769  DvMF_1991  response regulator receiver protein  46.49 
 
 
153 aa  99.4  2e-20  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_1352  response regulator receiver protein  45.3 
 
 
139 aa  99  2e-20  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00001959  n/a   
 
 
-
 
NC_011883  Ddes_0018  response regulator receiver protein  41.18 
 
 
135 aa  98.6  3e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  decreased coverage  0.00000218096  n/a   
 
 
-
 
NC_011769  DvMF_1773  response regulator receiver sensor signal transduction histidine kinase  46.55 
 
 
408 aa  98.6  3e-20  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013501  Rmar_0987  two component transcriptional regulator, winged helix family  42.86 
 
 
233 aa  98.2  3e-20  Rhodothermus marinus DSM 4252  Bacteria  normal  0.195539  n/a   
 
 
-
 
NC_008554  Sfum_0620  response regulator receiver protein  44.74 
 
 
142 aa  98.2  3e-20  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2037  response regulator receiver protein  46.3 
 
 
120 aa  98.2  4e-20  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0652  response regulator receiver protein  44.92 
 
 
122 aa  97.4  5e-20  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.429078  normal 
 
 
-
 
NC_002939  GSU0811  nitrogen regulation protein NtrX  42.34 
 
 
456 aa  97.1  8e-20  Geobacter sulfurreducens PCA  Bacteria  normal  0.686874  n/a   
 
 
-
 
NC_011662  Tmz1t_1843  two component, sigma54 specific, transcriptional regulator, Fis family  45.24 
 
 
465 aa  97.1  8e-20  Thauera sp. MZ1T  Bacteria  normal  0.798265  n/a   
 
 
-
 
NC_013173  Dbac_2272  response regulator receiver sensor signal transduction histidine kinase  44.35 
 
 
382 aa  95.9  2e-19  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.275022  n/a   
 
 
-
 
NC_013216  Dtox_0789  two component, sigma54 specific, transcriptional regulator, Fis family  40.35 
 
 
448 aa  94.7  4e-19  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_2541  two component, sigma54 specific, Fis family transcriptional regulator  38.33 
 
 
438 aa  94.7  4e-19  Jannaschia sp. CCS1  Bacteria  normal  0.281957  normal  0.250281 
 
 
-
 
NC_008554  Sfum_0657  response regulator receiver protein  44.35 
 
 
143 aa  94.4  4e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.771795  normal 
 
 
-
 
NC_007519  Dde_0327  response regulator receiver domain-containing protein  43.1 
 
 
142 aa  94.4  5e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3335  two component, sigma-54 specific, Fis family transcriptional regulator  38.98 
 
 
458 aa  94.4  5e-19  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_2130  two component, sigma54 specific, Fis family transcriptional regulator  40.83 
 
 
442 aa  93.6  7e-19  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.558101  n/a   
 
 
-
 
NC_009943  Dole_1362  response regulator receiver protein  40.52 
 
 
159 aa  94  7e-19  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2035  response regulator receiver protein  39.17 
 
 
129 aa  93.6  8e-19  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0692  response regulator receiver domain-containing protein  41.8 
 
 
145 aa  93.6  9e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.000176776  n/a   
 
 
-
 
NC_009943  Dole_2739  two component, sigma54 specific, Fis family transcriptional regulator  37.17 
 
 
451 aa  93.6  9e-19  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.693002  n/a   
 
 
-
 
NC_007404  Tbd_0904  two component Fis family transcriptional regulator  43.48 
 
 
454 aa  93.2  1e-18  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.629928  normal 
 
 
-
 
NC_007760  Adeh_0833  two component, sigma54 specific, Fis family transcriptional regulator  43.86 
 
 
466 aa  93.2  1e-18  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.96038  n/a   
 
 
-
 
NC_008751  Dvul_0150  response regulator receiver protein  45.53 
 
 
134 aa  92.8  1e-18  Desulfovibrio vulgaris DP4  Bacteria  normal  0.89872  normal  0.680282 
 
 
-
 
NC_009428  Rsph17025_0715  two component, sigma54 specific, Fis family transcriptional regulator  40.87 
 
 
442 aa  93.2  1e-18  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0889351  normal  0.39603 
 
 
-
 
NC_011891  A2cp1_2056  two component, sigma54 specific, transcriptional regulator, Fis family  43.86 
 
 
473 aa  92.4  2e-18  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.732718  n/a   
 
 
-
 
NC_007517  Gmet_0555  two component, sigma54 specific, Fis family transcriptional regulator  38.98 
 
 
457 aa  92.4  2e-18  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_0695  response regulator receiver domain-containing protein  42.24 
 
 
141 aa  92.4  2e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.396926  n/a   
 
 
-
 
NC_011145  AnaeK_0879  two component, sigma54 specific, transcriptional regulator, Fis family  42.98 
 
 
466 aa  92.4  2e-18  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1971  two component, sigma54 specific, transcriptional regulator, Fis family  43.86 
 
 
473 aa  92.4  2e-18  Anaeromyxobacter sp. K  Bacteria  normal  0.0887215  n/a   
 
 
-
 
NC_010730  SYO3AOP1_1480  two component transcriptional regulator, winged helix family  40.52 
 
 
219 aa  92.8  2e-18  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.000000000681553  n/a   
 
 
-
 
NC_011891  A2cp1_0883  two component, sigma54 specific, transcriptional regulator, Fis family  42.98 
 
 
466 aa  92.4  2e-18  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.879866  n/a   
 
 
-
 
NC_002939  GSU2915  sigma-54 dependent DNA-binding response regulator  38.98 
 
 
457 aa  91.7  3e-18  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_0805  two component, sigma54 specific, Fis family transcriptional regulator  40 
 
 
442 aa  91.7  3e-18  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_1992  two component, sigma54 specific, Fis family transcriptional regulator  40 
 
 
460 aa  91.7  3e-18  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1951  two component, sigma54 specific, Fis family transcriptional regulator  42.98 
 
 
470 aa  91.3  4e-18  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.516267  normal 
 
 
-
 
NC_007760  Adeh_1908  two component, sigma54 specific, Fis family transcriptional regulator  42.98 
 
 
473 aa  91.3  4e-18  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0532  two component, sigma54 specific, transcriptional regulator, Fis family  40.71 
 
 
470 aa  90.9  5e-18  Ammonifex degensii KC4  Bacteria  hitchhiker  0.00706375  n/a   
 
 
-
 
NC_007777  Francci3_0321  two component transcriptional regulator  43.1 
 
 
406 aa  90.9  5e-18  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_0495  two component, sigma-54 specific, Fis family transcriptional regulator  39.64 
 
 
456 aa  90.9  5e-18  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3286  two component, sigma54 specific, transcriptional regulator, Fis family  38.98 
 
 
458 aa  90.9  6e-18  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_0710  two component, sigma54 specific, Fis family transcriptional regulator  38.05 
 
 
456 aa  90.1  9e-18  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2549  response regulator receiver sensor signal transduction histidine kinase  47.57 
 
 
446 aa  89.7  1e-17  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_010814  Glov_2786  two component, sigma54 specific, transcriptional regulator, Fis family  36.75 
 
 
480 aa  89.4  1e-17  Geobacter lovleyi SZ  Bacteria  normal  0.543097  n/a   
 
 
-
 
NC_012850  Rleg_3460  two component, sigma54 specific, transcriptional regulator, Fis family  39.83 
 
 
444 aa  89.7  1e-17  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0376131  normal 
 
 
-
 
NC_012918  GM21_0962  two component, sigma54 specific, transcriptional regulator, Fis family  38.14 
 
 
458 aa  89.4  1e-17  Geobacter sp. M21  Bacteria  n/a    normal  0.277353 
 
 
-
 
NC_011145  AnaeK_1886  two component, sigma54 specific, transcriptional regulator, Fis family  39.17 
 
 
461 aa  89.7  1e-17  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_1081  two component  39.81 
 
 
441 aa  88.6  2e-17  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.136641  normal  0.653656 
 
 
-
 
NC_008554  Sfum_1934  two component, sigma54 specific, Fis family transcriptional regulator  39.47 
 
 
476 aa  89  2e-17  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.808753  normal  0.132653 
 
 
-
 
NC_008687  Pden_2964  two component, sigma54 specific, Fis family transcriptional regulator  38.26 
 
 
441 aa  89  2e-17  Paracoccus denitrificans PD1222  Bacteria  normal  0.0210387  normal  0.108805 
 
 
-
 
NC_009512  Pput_4322  two component, sigma54 specific, Fis family transcriptional regulator  39.47 
 
 
444 aa  89.4  2e-17  Pseudomonas putida F1  Bacteria  normal  0.713581  normal 
 
 
-
 
NC_007298  Daro_1804  two component, sigma54 specific, Fis family transcriptional regulator  40.71 
 
 
469 aa  88.6  3e-17  Dechloromonas aromatica RCB  Bacteria  normal  0.0358984  normal  0.379225 
 
 
-
 
NC_013525  Tter_1435  two component transcriptional regulator, winged helix family  35.59 
 
 
233 aa  88.2  3e-17  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009253  Dred_1510  two component, sigma54 specific, Fis family transcriptional regulator  35.96 
 
 
448 aa  88.2  3e-17  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3443  response regulator receiver protein  37.04 
 
 
223 aa  88.6  3e-17  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_3603  response regulator receiver protein  38.32 
 
 
131 aa  88.6  3e-17  Geobacter lovleyi SZ  Bacteria  normal  0.656399  n/a   
 
 
-
 
NC_011661  Dtur_0154  two component transcriptional regulator, winged helix family  37.17 
 
 
220 aa  87.8  4e-17  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.443854  n/a   
 
 
-
 
NC_011369  Rleg2_3169  two component, sigma54 specific, transcriptional regulator, Fis family  38.98 
 
 
444 aa  88.2  4e-17  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.254755  normal  0.187976 
 
 
-
 
NC_008044  TM1040_1461  two component, sigma54 specific, Fis family transcriptional regulator  36.22 
 
 
445 aa  87.8  5e-17  Ruegeria sp. TM1040  Bacteria  normal  0.0783973  normal  0.675596 
 
 
-
 
NC_009483  Gura_0009  multi-sensor signal transduction histidine kinase  37.29 
 
 
508 aa  87.8  5e-17  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3695  response regulator receiver  39.68 
 
 
236 aa  87.8  5e-17  Nocardioides sp. JS614  Bacteria  normal  0.795948  n/a   
 
 
-
 
NC_013131  Caci_0904  two component transcriptional regulator, winged helix family  41.07 
 
 
254 aa  87.4  6e-17  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.936287  normal  0.32173 
 
 
-
 
NC_013521  Sked_32700  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  40 
 
 
271 aa  87  7e-17  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.442824  normal  0.485424 
 
 
-
 
NC_011769  DvMF_2334  response regulator receiver protein  41.13 
 
 
151 aa  87.4  7e-17  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_2039  two component, sigma54 specific, Fis family transcriptional regulator  38.84 
 
 
476 aa  87  7e-17  Desulfovibrio vulgaris DP4  Bacteria  normal  0.238588  normal 
 
 
-
 
NC_007517  Gmet_2924  two component, sigma54 specific, Fis family transcriptional regulator  38.14 
 
 
470 aa  87  8e-17  Geobacter metallireducens GS-15  Bacteria  normal  0.777319  hitchhiker  0.0000000000564278 
 
 
-
 
NC_002947  PP_1401  two component, sigma54 specific, transcriptional regulator, Fis family  39.47 
 
 
444 aa  86.7  9e-17  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1341  response regulator receiver protein  40.87 
 
 
301 aa  86.7  9e-17  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
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