Gene Mmc1_3443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3443 
Symbol 
ID4483175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4299817 
End bp4300488 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content47% 
IMG OID639724191 
Productresponse regulator receiver protein 
Protein accessionYP_867334 
Protein GI117926717 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCTA AAGCGCGCTT GTTAATTGTG GATGATGATG CAGAATTTCG TGAAAACTTG 
AGCCAAATTA TGTTGGCGCA CGGTTTTGAA ATTGAAGAGA CAAACTCGGG CAAAAGCGCC
TTGAGTAGGG TGCAAAGCGA ACCGTTTGAT ATTGTTTTGC TGGATATGAT GATGCCCGGT
ATGGATGGTA TCGAGACCCT GCGAGAGATG GAAAAACTCA GCCAACACCC TAAAATTATA
CTGATTACGG CTTTTTCCAC GGTGCAAAAT GCGGTGGAGG CGATTAAACG AGGTGCCTCA
GACTATGTAT CCAAGCCGTT TAAAGTCGAA GAGCTGCTGG CGGTGATCCA GCGCACCCTG
GAAGAGGCAA AGTTTGAAGA GGAGATCCGC ATTGAGGATC TTGATCAAAC CTTGGGTTCA
CTGGCAAACC CGATTCGTCA AAAGATCATC GCGCTGTTGG GTAGCGGCCT ACCCCAACGC
TTGATGGAGA TTCGTAAGAT CCTAGATATT GAGGATCACA CCAAAGTGGT GTTTCATTTA
AAAATTCTAA AAGAGTCTGG TTTGGTACAG CAGCAGAGTG ACCGCGCTTA TGTGCTGTCC
GATTCGGGTA AAGAAGTATT GCAATTTCTT AAATCGCTGA AAAGCCGTCT CCCTTCGGTT
CCCCTGTCCT GA
 
Protein sequence
MQAKARLLIV DDDAEFRENL SQIMLAHGFE IEETNSGKSA LSRVQSEPFD IVLLDMMMPG 
MDGIETLREM EKLSQHPKII LITAFSTVQN AVEAIKRGAS DYVSKPFKVE ELLAVIQRTL
EEAKFEEEIR IEDLDQTLGS LANPIRQKII ALLGSGLPQR LMEIRKILDI EDHTKVVFHL
KILKESGLVQ QQSDRAYVLS DSGKEVLQFL KSLKSRLPSV PLS