More than 300 homologs were found in PanDaTox collection
for query gene Sfum_0656 on replicon NC_008554
Organism: Syntrophobacter fumaroxidans MPOB



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008554  Sfum_0656  response regulator receiver protein  100 
 
 
129 aa  258  2e-68  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.663964  normal 
 
 
-
 
NC_008554  Sfum_0654  response regulator receiver protein  56.9 
 
 
413 aa  133  9.999999999999999e-31  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.113697  normal 
 
 
-
 
NC_011769  DvMF_1772  response regulator receiver protein  55.93 
 
 
151 aa  131  3e-30  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_2335  response regulator receiver protein  55.26 
 
 
411 aa  131  3.9999999999999996e-30  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.0000388714  n/a   
 
 
-
 
NC_008751  Dvul_0404  response regulator receiver protein  54.24 
 
 
151 aa  130  6e-30  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.134088 
 
 
-
 
NC_008751  Dvul_0407  response regulator receiver protein  52.17 
 
 
128 aa  119  9.999999999999999e-27  Desulfovibrio vulgaris DP4  Bacteria  normal  0.627834  normal  0.12665 
 
 
-
 
NC_011883  Ddes_0816  response regulator receiver protein  51.28 
 
 
157 aa  119  1.9999999999999998e-26  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1769  response regulator receiver protein  50 
 
 
129 aa  118  3e-26  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_2269  response regulator receiver protein  44.26 
 
 
130 aa  115  1.9999999999999998e-25  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.740525  n/a   
 
 
-
 
NC_007519  Dde_0328  response regulator receiver domain-containing protein  49.12 
 
 
406 aa  114  3e-25  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.918345  n/a   
 
 
-
 
NC_013173  Dbac_2271  response regulator receiver protein  48.65 
 
 
127 aa  115  3e-25  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.420434  n/a   
 
 
-
 
NC_007519  Dde_0321  response regulator receiver domain-containing protein  46.15 
 
 
122 aa  108  2.0000000000000002e-23  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0173  response regulator receiver protein  47.46 
 
 
121 aa  107  6e-23  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_0324  response regulator receiver domain-containing protein  49.11 
 
 
127 aa  105  2e-22  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.581793  n/a   
 
 
-
 
NC_008554  Sfum_0636  response regulator receiver protein  47.9 
 
 
124 aa  104  5e-22  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.621219  normal 
 
 
-
 
NC_013173  Dbac_1807  response regulator receiver protein  46.09 
 
 
139 aa  103  7e-22  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1341  response regulator receiver protein  45.3 
 
 
301 aa  102  2e-21  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0327  response regulator receiver domain-containing protein  41.74 
 
 
142 aa  101  4e-21  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2331  response regulator receiver protein  40.35 
 
 
142 aa  100  9e-21  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00000000425244  n/a   
 
 
-
 
NC_011769  DvMF_1988  response regulator receiver protein  45.3 
 
 
119 aa  99.4  1e-20  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008554  Sfum_0648  response regulator receiver protein  41.03 
 
 
151 aa  98.6  2e-20  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_0314  response regulator receiver protein  42.11 
 
 
131 aa  96.3  1e-19  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0234873  n/a   
 
 
-
 
NC_008751  Dvul_0403  response regulator receiver sensor signal transduction histidine kinase  47.83 
 
 
374 aa  95.5  2e-19  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.150899 
 
 
-
 
NC_011883  Ddes_0814  response regulator receiver protein  41.03 
 
 
132 aa  95.1  3e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1357  response regulator receiver protein  44.83 
 
 
144 aa  95.1  3e-19  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.48275  n/a   
 
 
-
 
NC_011769  DvMF_1991  response regulator receiver protein  44.74 
 
 
153 aa  94.7  4e-19  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_1350  response regulator receiver protein  42.73 
 
 
147 aa  94  6e-19  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00189482  n/a   
 
 
-
 
NC_009943  Dole_1347  response regulator receiver protein  39.13 
 
 
688 aa  93.6  7e-19  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0652  response regulator receiver protein  44.64 
 
 
122 aa  93.6  9e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.429078  normal 
 
 
-
 
NC_009943  Dole_1351  response regulator receiver protein  41.59 
 
 
141 aa  92.8  1e-18  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000171187  n/a   
 
 
-
 
NC_009523  RoseRS_1088  two component transcriptional regulator  42.02 
 
 
264 aa  93.2  1e-18  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.237646 
 
 
-
 
NC_012850  Rleg_3460  two component, sigma54 specific, transcriptional regulator, Fis family  38.26 
 
 
444 aa  92.4  2e-18  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0376131  normal 
 
 
-
 
NC_011769  DvMF_2550  multi-sensor signal transduction histidine kinase  46.9 
 
 
685 aa  91.7  3e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_2272  response regulator receiver sensor signal transduction histidine kinase  40.87 
 
 
382 aa  92  3e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.275022  n/a   
 
 
-
 
NC_008751  Dvul_2827  response regulator receiver protein  43.36 
 
 
137 aa  91.7  3e-18  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1362  response regulator receiver protein  36.22 
 
 
159 aa  91.7  3e-18  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_3169  two component, sigma54 specific, transcriptional regulator, Fis family  37.39 
 
 
444 aa  91.3  4e-18  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.254755  normal  0.187976 
 
 
-
 
NC_011883  Ddes_0018  response regulator receiver protein  40.16 
 
 
135 aa  91.3  4e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  decreased coverage  0.00000218096  n/a   
 
 
-
 
NC_009675  Anae109_2205  two component Fis family transcriptional regulator  44.14 
 
 
182 aa  91.3  4e-18  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.143694 
 
 
-
 
NC_007760  Adeh_1607  two component Fis family transcriptional regulator  44.14 
 
 
185 aa  90.9  5e-18  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.016434  n/a   
 
 
-
 
NC_011145  AnaeK_2255  two component transcriptional regulator, Fis family  44.14 
 
 
185 aa  90.9  5e-18  Anaeromyxobacter sp. K  Bacteria  normal  0.0449716  n/a   
 
 
-
 
NC_011891  A2cp1_2343  two component transcriptional regulator, Fis family  44.14 
 
 
185 aa  90.9  5e-18  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.888574  n/a   
 
 
-
 
NC_008789  Hhal_1965  two component LuxR family transcriptional regulator  43.97 
 
 
217 aa  90.9  5e-18  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0987  two component transcriptional regulator, winged helix family  41.38 
 
 
233 aa  90.9  5e-18  Rhodothermus marinus DSM 4252  Bacteria  normal  0.195539  n/a   
 
 
-
 
NC_009943  Dole_1348  response regulator receiver protein  40.87 
 
 
173 aa  90.1  1e-17  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3715  multi-sensor signal transduction histidine kinase  44.25 
 
 
653 aa  89.7  1e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2034  response regulator receiver protein  40.87 
 
 
300 aa  89.4  1e-17  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2037  response regulator receiver protein  39.47 
 
 
120 aa  89.4  2e-17  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_2690  two component Fis family transcriptional regulator  40.18 
 
 
179 aa  88.6  2e-17  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1360  response regulator receiver sensor signal transduction histidine kinase  41.44 
 
 
403 aa  89.4  2e-17  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_2366  two component, sigma54 specific, Fis family transcriptional regulator  41.9 
 
 
385 aa  89.4  2e-17  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000342445  n/a   
 
 
-
 
NC_008751  Dvul_2709  response regulator receiver sensor signal transduction histidine kinase  45.61 
 
 
501 aa  89  2e-17  Desulfovibrio vulgaris DP4  Bacteria  normal  0.710197  normal  0.745824 
 
 
-
 
NC_003910  CPS_4272  sigma-54 dependent response regulator  35.04 
 
 
457 aa  88.6  3e-17  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2035  response regulator receiver protein  37.9 
 
 
129 aa  88.2  3e-17  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1085  putative two component, sigma54 specific, transcriptional regulator, Fis family  38.52 
 
 
445 aa  88.6  3e-17  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2042  response regulator receiver protein  38.14 
 
 
147 aa  88.6  3e-17  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_2795  two component transcriptional regulator  39.5 
 
 
266 aa  88.2  3e-17  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_1226  putative two component, sigma54 specific, transcriptional regulator, Fis family  39.68 
 
 
445 aa  88.2  3e-17  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1405  two component, sigma54 specific, transcriptional regulator, Fis family  39.66 
 
 
478 aa  88.2  4e-17  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000117702 
 
 
-
 
NC_007005  Psyr_4230  helix-turn-helix, Fis-type  43.64 
 
 
187 aa  88.2  4e-17  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.547094  normal 
 
 
-
 
NC_011146  Gbem_2805  two component, sigma54 specific, transcriptional regulator, Fis family  39.66 
 
 
478 aa  87.8  4e-17  Geobacter bemidjiensis Bem  Bacteria  normal  0.228775  n/a   
 
 
-
 
NC_007802  Jann_2541  two component, sigma54 specific, Fis family transcriptional regulator  39.13 
 
 
438 aa  87.8  4e-17  Jannaschia sp. CCS1  Bacteria  normal  0.281957  normal  0.250281 
 
 
-
 
NC_009943  Dole_2333  response regulator receiver protein  41.38 
 
 
117 aa  87.8  4e-17  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.0000000530573  n/a   
 
 
-
 
NC_008554  Sfum_0632  response regulator receiver protein  42.24 
 
 
135 aa  87.4  5e-17  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008687  Pden_4405  two component, sigma54 specific, Fis family transcriptional regulator  37.39 
 
 
448 aa  87.4  5e-17  Paracoccus denitrificans PD1222  Bacteria  normal  0.851623  normal  0.211367 
 
 
-
 
NC_009675  Anae109_4257  two component, sigma54 specific, Fis family transcriptional regulator  40.57 
 
 
463 aa  87.4  6e-17  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_3765  two component, sigma54 specific, Fis family transcriptional regulator  32.54 
 
 
463 aa  87  8e-17  Syntrophobacter fumaroxidans MPOB  Bacteria  decreased coverage  0.000821276  normal 
 
 
-
 
NC_012917  PC1_3049  putative two component, sigma54 specific, transcriptional regulator, Fis family  38.89 
 
 
445 aa  86.7  9e-17  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1358  response regulator receiver protein  39.06 
 
 
144 aa  86.3  1e-16  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.107991  n/a   
 
 
-
 
NC_004578  PSPTO_4553  DNA-binding response regulator  42.73 
 
 
187 aa  86.7  1e-16  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.023221  n/a   
 
 
-
 
NC_007298  Daro_1804  two component, sigma54 specific, Fis family transcriptional regulator  36.36 
 
 
469 aa  86.3  1e-16  Dechloromonas aromatica RCB  Bacteria  normal  0.0358984  normal  0.379225 
 
 
-
 
NC_009832  Spro_3651  two component, sigma54 specific, Fis family transcriptional regulator  39.66 
 
 
445 aa  86.7  1e-16  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_2739  two component, sigma54 specific, Fis family transcriptional regulator  37.17 
 
 
451 aa  86.7  1e-16  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.693002  n/a   
 
 
-
 
NC_007963  Csal_0717  two component, sigma54 specific, Fis family transcriptional regulator  41.23 
 
 
466 aa  86.3  1e-16  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0618  response regulator receiver protein  37.39 
 
 
157 aa  86.7  1e-16  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1773  response regulator receiver sensor signal transduction histidine kinase  44.83 
 
 
408 aa  86.7  1e-16  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011769  DvMF_1461  two component, sigma54 specific, transcriptional regulator, Fis family  36.52 
 
 
491 aa  85.5  2e-16  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.750458 
 
 
-
 
NC_007498  Pcar_1994  two component signal transduction response regulator  42.99 
 
 
477 aa  85.9  2e-16  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2015  two component hybrid sensor response regulator  38.46 
 
 
391 aa  85.9  2e-16  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2737  response regulator receiver domain-containing protein  35.61 
 
 
139 aa  85.5  2e-16  Rhodoferax ferrireducens T118  Bacteria  hitchhiker  0.00154696  n/a   
 
 
-
 
NC_011830  Dhaf_4779  two component, sigma54 specific, transcriptional regulator, Fis family  36.52 
 
 
494 aa  85.5  2e-16  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_0715  two component, sigma54 specific, Fis family transcriptional regulator  37.61 
 
 
442 aa  85.9  2e-16  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0889351  normal  0.39603 
 
 
-
 
NC_007493  RSP_2130  two component, sigma54 specific, Fis family transcriptional regulator  36.44 
 
 
442 aa  84.7  4e-16  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.558101  n/a   
 
 
-
 
NC_011145  AnaeK_1886  two component, sigma54 specific, transcriptional regulator, Fis family  39.13 
 
 
461 aa  84.7  4e-16  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_2392  two component, sigma54 specific, transcriptional regulator, Fis family  39.17 
 
 
458 aa  84.7  4e-16  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0321511  normal 
 
 
-
 
NC_007760  Adeh_1992  two component, sigma54 specific, Fis family transcriptional regulator  39.13 
 
 
460 aa  84.7  4e-16  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2768  putative two component, sigma54 specific, transcriptional regulator, Fis family  37.7 
 
 
445 aa  84.3  5e-16  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2563  two component, sigma54 specific, Fis family transcriptional regulator  39.64 
 
 
480 aa  84.3  5e-16  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00247378 
 
 
-
 
NC_007802  Jann_2240  two component, sigma54 specific, Fis family transcriptional regulator  38.79 
 
 
465 aa  84.3  5e-16  Jannaschia sp. CCS1  Bacteria  normal  0.261318  normal 
 
 
-
 
NC_009483  Gura_0495  two component, sigma-54 specific, Fis family transcriptional regulator  36.84 
 
 
456 aa  84.3  5e-16  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1259  two component, sigma54 specific, Fis family transcriptional regulator  39.17 
 
 
445 aa  84.3  5e-16  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1152  sigma-54 dependent DNA-binding response regulator  39.17 
 
 
445 aa  84.3  5e-16  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1114  response regulator receiver modulated serine phosphatase  44.23 
 
 
391 aa  84.3  5e-16  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_010159  YpAngola_A3629  two-component system response regulator  39.17 
 
 
445 aa  84.3  5e-16  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1361  response regulator receiver protein  38.46 
 
 
147 aa  84  6e-16  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2679  response regulator receiver domain-containing protein  38.79 
 
 
129 aa  84  6e-16  Geobacter metallireducens GS-15  Bacteria  normal  0.380915  normal  0.27601 
 
 
-
 
NC_002947  PP_1401  two component, sigma54 specific, transcriptional regulator, Fis family  38.94 
 
 
444 aa  84  7e-16  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_0555  two component, sigma54 specific, Fis family transcriptional regulator  35.96 
 
 
457 aa  83.6  7e-16  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4351  two component transcriptional regulator, winged helix family  40.17 
 
 
229 aa  83.6  7e-16  Actinosynnema mirum DSM 43827  Bacteria  normal  0.997672  n/a   
 
 
-
 
NC_008609  Ppro_3079  two component, sigma54 specific, Fis family transcriptional regulator  37.84 
 
 
480 aa  84  7e-16  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00177638  n/a   
 
 
-
 
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