| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0677 |
|---|
| Symbol | |
|---|
| ID | 6027611 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | + |
|---|
| Start bp | 711828 |
|---|
| End bp | 712859 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641593506 |
|---|
| Product | response regulator receiver modulated metal dependent phosphohydrolase |
|---|
| Protein accession | YP_001716843 |
|---|
| Protein GI | 169830861 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.756866 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCAAAGC CATCCCGGAT ACTGGTAGTG GATGATGAAC TGGGTCCAAG GGAAGCATTG
AGGTTGATTT TGCAGGATCA CTACGAAATA TCCACGGCGC AGAACGGTCA TCAGGCGCTG
GATTACCTTT CGAAGAACGA GTTTGATCTG GTGATCCTGG ACATCAGGAT GCCCGATGTC
AACGGTATTG ATCTGCTTGC GGAGGTAAAG AAAAAGGTTC CGGAGACGGA GGTGGTGATG
ATTACCGCCT ACGCCTCCGT TGACACGGCC GCCAGCGCCT TGAGGCTCGG CGCTTTGGAC
TATCTCATCA AGCCTTTCGA CCGGAAAGCG GTTATGGAAG TGGTTGAAAA GGGACTGTCG
CGGCGCGCCG AATCCCGCAA GATAAGAAGC CGGCTCGATG AGCTGCAGTT GGCCAACAAG
ACCCTGAGAC GGGAAATTGA AAAGGCCTTC GTCAACATCC AGCGGCACTA CCTGGAAACG
GTGCGCTCCC TGGTGGCGGC CATCGACGCC AAGGATTCAT ACACCAAATC CCACCAGGAA
AGAGTGGTCA TGTTCGCCAT GCTTCTGGGG GCGGAACTGG GCCTGTCGGC CGGGGAAATC
GACGTACTCC GGCAGGCCGC GGTACTGCAC GATATCGGCA AAATCGGAGT ACCGGAGCAG
ATTCTCAGGA AACCGGAGCA CCTGATCTCC GAGGAGTTTG ACATCATCAG ACAGCATCCG
GTCATCGGCG CGGAAATTAT CTCCCCGGTG CGGTTCCTGA GCGAAGTGGT ACAGATTGTC
CTGCACCATC ACGAACGGTT TGACGGGACG GGTTATCCCG ACGGGCTCAA AGGCGCAGAA
ATCCCTCTGG GGGCCAGGAT CCTGGCGGTT GCCGACGCGG TCGACGCCAT GCTCTCCGAT
CGCCCCTACG CCCGGGCGAG AACGGTCGCC GAAGTGCGAG AAGAACTCCG CCGCTGCTCG
GGCACCCAGT TCGACCCCCA GTTGGTGAAG ATTGCGTTGA AGATAGACCT TCCATCCAGG
CGCATCACAT AA
|
|---|
| Protein sequence | MAKPSRILVV DDELGPREAL RLILQDHYEI STAQNGHQAL DYLSKNEFDL VILDIRMPDV
NGIDLLAEVK KKVPETEVVM ITAYASVDTA ASALRLGALD YLIKPFDRKA VMEVVEKGLS
RRAESRKIRS RLDELQLANK TLRREIEKAF VNIQRHYLET VRSLVAAIDA KDSYTKSHQE
RVVMFAMLLG AELGLSAGEI DVLRQAAVLH DIGKIGVPEQ ILRKPEHLIS EEFDIIRQHP
VIGAEIISPV RFLSEVVQIV LHHHERFDGT GYPDGLKGAE IPLGARILAV ADAVDAMLSD
RPYARARTVA EVREELRRCS GTQFDPQLVK IALKIDLPSR RIT
|
|---|
| |