Gene Anae109_3404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_3404 
Symbol 
ID5374251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp3996393 
End bp3997760 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content72% 
IMG OID640844923 
Producttwo component, sigma54 specific, Fis family transcriptional regulator 
Protein accessionYP_001380572 
Protein GI153006247 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.235439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.675632 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCCA CGATCCTCGT CGTGGACGAC GAGAAGAACA TACAGCTGAC GCTCTCGCGC 
GCCCTTTCGA TGGAGGGGTA TGTGGTCGAA GCTGCGAGCG GCGGACGCGA GGCGCTCGAC
AAGATTGCCG CCCTCCCGGT GGACGCCGTC GTGATGGACG TGCGCATGCC GGATCTCGAC
GGGCTCGAGG TGCTGAGGCG CGCGCGCGAG ACGCGCCCCG ATCTCCCGGT CGTGATCATG
TCGGGCCACG GCTCGCTCGA GACGGTGCGC AGCGCCTTCA AGCTGGGCGC CTTCGATTAC
CTCGAGAAGC CGATCACCGA GAAGGACAAG CTGCTCGTCG CGGTGAAGAA CGCGCTCGCG
CTGCGCACCC TGCGGGAGGA GAACGCGGAG CTCCGCCGGG CGGCGGGCCC GGCCGAGATG
GTGGGCAGCG GACCCGCGAT GCAGCGCCTG TTCGAGCTCA TCCGCCGGGC GGCCCCGTCG
GAGGGCCGCG TGCTCGTCAC GGGAGAGAAC GGGACCGGCA AGGAGCTCGT CGCCCGCGCC
ATCCACGAGA GCTCGCGGCG CAAGGCCGGC CCCTTCGTGA AGCTGAACTG CGCCGCCGTG
CCGGCCGAGC TCATCGAGAG CGAGCTCTTC GGCCACGAGC GGGGGGCGTT CACGGGGGCC
GTCGCCGCGC GGCGCGGCAA GTTCGAGCTC GCCGACGGCG GCACGCTCTT CCTCGACGAG
GTGGGGGACA TGCCCGCCGC GATGCAGGCC AAGGTCCTGC GCGTGCTCCA GGAGGGAGAG
TTCGAGCGGG TGGGCGGGGC GCACACGCTG AAGGTGGACG TGCGCGTCGT GGCCGCGACG
AACAAGGACC TCGCGGCGGA GGTCCAGGCG GGCCGCTTCC GCGAGGATCT GTTCTACCGG
CTGAGCGTCG TCCCCGTGCA CGCGCCGCCG CTGCGCGAGC GGAAGGAGGA CATCCCCGAG
CTCGCGACGC GCTTCCTCGC GGAGGCGTGC GACCGGAACG GCCGGCGGCC GATGCGCCTC
CCGCGCGAGG CGCTCGCGGC GCTGCAGGGG CACGAGTGGC CCGGCAACGT CCGCGAGCTG
CGGAACCTCG TCGAGCGGCT CGCGATCCTC TGCGACGGCC CGGAGATCTC CGCCCAGGAC
GTGGCCGCGG TGCTGCCCGG CGCGCGCCGC CCCCGCCCCG ATCGCTTCCG CGCCGGCGCC
TCGTTCCACG ATCTCGTGGA GGAGGCGGAG CGCGAGATCA TCCTCGGCGC CCTGGACGCG
CACGACGACA ACGTCTCGGA GACCGCGCGC GATCTGGGCC TCGAGCGGAG CCACCTGTAC
AAGAAGATGC GTGCGCTCGG AGTGAGGCGG GGCGGCGACT CCCAGTGA
 
Protein sequence
MAATILVVDD EKNIQLTLSR ALSMEGYVVE AASGGREALD KIAALPVDAV VMDVRMPDLD 
GLEVLRRARE TRPDLPVVIM SGHGSLETVR SAFKLGAFDY LEKPITEKDK LLVAVKNALA
LRTLREENAE LRRAAGPAEM VGSGPAMQRL FELIRRAAPS EGRVLVTGEN GTGKELVARA
IHESSRRKAG PFVKLNCAAV PAELIESELF GHERGAFTGA VAARRGKFEL ADGGTLFLDE
VGDMPAAMQA KVLRVLQEGE FERVGGAHTL KVDVRVVAAT NKDLAAEVQA GRFREDLFYR
LSVVPVHAPP LRERKEDIPE LATRFLAEAC DRNGRRPMRL PREALAALQG HEWPGNVREL
RNLVERLAIL CDGPEISAQD VAAVLPGARR PRPDRFRAGA SFHDLVEEAE REIILGALDA
HDDNVSETAR DLGLERSHLY KKMRALGVRR GGDSQ