Gene Rmar_0797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0797 
Symbol 
ID8567435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp916188 
End bp917606 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content63% 
IMG OID 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionYP_003290083 
Protein GI268316364 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.241811 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGCGC CTCAGCGCGA CGTTCCACAC ATTTTGCTGG TCGACGACGA ACACCTGCTG 
CACACGCTCT TTGAGCGGCT GTTTACCCGG CATGGCCTGC GTCTGACGAG TTGCTACAAT
GCCCTGCAGG CTATGGAGGT GCTCAAGAAG GAGGCCGACG CCTTCGATCT GGTCATCACC
GATTTCAAGA TGCCGGATAT GGACGGGCTG GAGCTACTCG CCTATATCCG GCAGGAGCAC
CCGGACCTGC AGGTGATCAT GATCACGGCG CACGCGAACG TGCAGCACGC CGTGCGGGCC
ATGCAGAACG GGGCCATTGA CTACATTCCC AAGCCGTTTT CGACGGAAGA GCTGGTCGAG
CGTGTGCAGG CCGCGCTGGC CCGCCGACGG GAGCAGCAGG AAGCCCGGGC GAAGCAACCG
GCCCGCACGT CACAGCGCCG CGCCCGGCCG ACCATCGAGT ACGTGGGGGA GCATCCCATG
ATTCGCCGGC TCAAAGAGAT GTTGCCGCGC GTGGCCGCCA ACAAGGCACC GGTCTTTATC
CAGGGCGAAA GCGGTACCGG CAAGGAGATC CTCGCCCGAC TGATCCACCA GATGAGCGAC
CGGGCCGAAG GGCCGTTCGT GGCGATCAAC TGCGCCAACC TGCCGCGCGA GCTGGTCGAA
AGCCACCTGT TCGGGCACCG GAAGGGCGCT TTCACCGGAG CCATCGAAGA CATGACCGGC
GCCTTCGAAC GGGCCGAAGG TGGAACGCTG CTGCTGGACG AGATCACCGA GGTCGATCTG
GCCATCCAGG CCAAGCTGCT CCGTGTGCTG CAGGAGCAGG AGATCCAGAA GGTGGGGTCC
ACCGAGCCGC GCAAGATCGA CGTGCGGGTC ATTGCTACCA GCAACCGCAA CCTGAGCGAG
GCCATTGCCA AGGGCGAGTT TCGGGAAGAC CTGTACCACC GGTTGAGCGT GTTTCCGCTG
AGCGTGCCGC CGCTGCGGGA GCGCATGTCG GACGTGCCGC TGCTGGTGGC GCACTTCATC
AAAAAGTACT GTGAACTGTA CGGCCTGCCA CCCAAAAAGG TGTCAGACGC GCTGATGGAG
CGCTTCATGC AGTACCCCTG GCCGGGCAAC GTGCGCCAGC TGGAAAACTA CGTGCAGCGC
GGCGTGCTGC TTTCGGCCGA ACGGGAGGTC ATCGAGGTCG AGGACGTTTT CAACGACTTC
TTTGCCGATG CCGAACCGGC GCGACAGAAC GCCTCGGCAG AAAAAGAAGA GCTCCTTGGA
CGCGTGCAGA CCATCGAGGA CATGGAGCGG GAGATGATTC TGCGCGCGCT CAAGGAGACC
AACAACAATC AGCAGCTGGC CGCCCAGAAG CTGGGCATCA GCGCCCGTAC GATTCGTAAC
AAGCTGAAGC GCTATCGCGA GCAGGGATTG ATTTCCTGA
 
Protein sequence
MAAPQRDVPH ILLVDDEHLL HTLFERLFTR HGLRLTSCYN ALQAMEVLKK EADAFDLVIT 
DFKMPDMDGL ELLAYIRQEH PDLQVIMITA HANVQHAVRA MQNGAIDYIP KPFSTEELVE
RVQAALARRR EQQEARAKQP ARTSQRRARP TIEYVGEHPM IRRLKEMLPR VAANKAPVFI
QGESGTGKEI LARLIHQMSD RAEGPFVAIN CANLPRELVE SHLFGHRKGA FTGAIEDMTG
AFERAEGGTL LLDEITEVDL AIQAKLLRVL QEQEIQKVGS TEPRKIDVRV IATSNRNLSE
AIAKGEFRED LYHRLSVFPL SVPPLRERMS DVPLLVAHFI KKYCELYGLP PKKVSDALME
RFMQYPWPGN VRQLENYVQR GVLLSAEREV IEVEDVFNDF FADAEPARQN ASAEKEELLG
RVQTIEDMER EMILRALKET NNNQQLAAQK LGISARTIRN KLKRYREQGL IS