Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2658 |
Symbol | |
ID | 6782655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 3077532 |
End bp | 3078908 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642768653 |
Product | two component, sigma54 specific, transcriptional regulator, Fis family |
Protein accession | YP_002139462 |
Protein GI | 197119035 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAAAGA TACTGATAAT AGACGACGAG GCCTTCATCT GCGAGAACGT GCAGCGCATC CTTTCCGGCG AAGGGTTCCT GGTCTGCGCC GCCGGGTCCG GAAAAGAGGC GCGCGACATC GTGGCCGGCG AAGAGATCGA CCTGGCCCTG CTCGACCTGA ACCTCGGCTC CGAGGACGGC ATCGAGGTCC TCAAATCGCT CAAGGAGACG GACCCGGAAC TGCTGGTGAT CATCATCACC GGGTACGGCT CGGTCGAGAG CGCCGTCGAG TCCCTGCAAC TGGGCGCCTT CCACTACATG AAGAAGCCCT TCAAGGCAGA CGCGCTCAGG CTGATCGTCA AGCTCGCCCT GAAGACGCAG ACCTTGAAGC GCGAGGTCCG CAAGCTAAAG CGCAACGACT CCCCACTCCC CGGGCGCTCC CCCATCATCG GCAAGAGCGA GGCATTTCAG GAGATGGCGG CCCAGGTGCG TGAGATCGCC CGCATCCCCT CCACCGTGCT CATCACCGGC GAATCAGGTA CCGGCAAAGA GGTGGTAGCC CGCGCCATCC ATGACCTCTC CGACCGCAAG GAACAAGCTT TCATTGCCAT CAACTGCGCC TCCATCCCGG CCCCTCTCTT GGAGAGCGAG CTCTTCGGGC ACGAGAAGGG GGCCTTCACC GGCGCCAGCG GACGTAAGAA GGGGCTCTTC GAGGAGGCGC ACCACGGCAC CATCTTCCTG GACGAAATCG GGGAGATGGA CATGGCGATG CAGGTGAAGC TTTTGCGCGT GCTGCAGGAG AGGACCATCA GGCGAGTGGG CGCCGTCAAG GACATCGAGA TAGACGCGCG GGTCATAGCC GCCACCAACC GCAACCTCGC CAAGCGGATC GAGGAGAAGA GTTTCCGCGA AGACCTCTTC TACCGCCTCA ACGTGTTTCC CATCAACATA CCTCCGCTTA GGGAGCGCCC CGCAGACATA GCCGCCCTCG CCGTCTACTT CCTGGACAGC TTCAGCCGCT CCTTCGGCCG CGACTTCCGC GACGTCTCAC CCGAGGCGGA GCAACTGATG GCGCAGTACG CCTGGCCCGG CAACGTCAGG GAGTTGAGGA ACGTGATAGA ACGGATCTGC ATCATGCGCA GCGGCCCAAC CCTGCTCCCG GAACATCTGC CGCAGGAGAT CAGGAGCACC GTGGCTCCCC CCCCCTTGCC GGCAGAGCTC CCCATCAGCA TCGCTGCCGA TCTCGGGCTC GAAGAGGCGG TGAGCGCCAT CGAGAAATCG CTCATCCAGC AGGCCCTCCA GAAGACGGGG TGGAACGTGC TGCAGACGGC GGCCAACCTG AAGATCCCCC GTGGCACCCT GCGCTACAAG ATGGAGAAGT ACGGCCTGAT TCAATAG
|
Protein sequence | MEKILIIDDE AFICENVQRI LSGEGFLVCA AGSGKEARDI VAGEEIDLAL LDLNLGSEDG IEVLKSLKET DPELLVIIIT GYGSVESAVE SLQLGAFHYM KKPFKADALR LIVKLALKTQ TLKREVRKLK RNDSPLPGRS PIIGKSEAFQ EMAAQVREIA RIPSTVLITG ESGTGKEVVA RAIHDLSDRK EQAFIAINCA SIPAPLLESE LFGHEKGAFT GASGRKKGLF EEAHHGTIFL DEIGEMDMAM QVKLLRVLQE RTIRRVGAVK DIEIDARVIA ATNRNLAKRI EEKSFREDLF YRLNVFPINI PPLRERPADI AALAVYFLDS FSRSFGRDFR DVSPEAEQLM AQYAWPGNVR ELRNVIERIC IMRSGPTLLP EHLPQEIRST VAPPPLPAEL PISIAADLGL EEAVSAIEKS LIQQALQKTG WNVLQTAANL KIPRGTLRYK MEKYGLIQ
|
| |