| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2084 |
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| Symbol | |
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| ID | 9138787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 2704463 |
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| End bp | 2705896 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | sigma-54 factor interaction domain-containing protein |
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| Protein accession | YP_003630110 |
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| Protein GI | 296122332 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.327808 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCCTC TGGAAGGGCA AGGAGAAAGC CCGTTGGGTA CGATGACATC AAACAAACTG
CGTGTGCTGT TCGTGGATGA TGAGGCGGCT ATCCGCAGTG TGATGAAGAT CGAATTGCCA
CGCATGGGGC ACGATGTCAC ATTTTGCGAA GATGGTGAAT CCGCACTCAA GGTGCTGGAG
AATCATACCT TCGATGCTGC GATTGTGGAT CTGCGGATGC CAGGGATCAG TGGCTGGGAT
GTGATTGATC ACATCAAAAA AGTTTCTCCG GAAACTGAAG TGATTATCAG TACGGGTCAT
GGTGATCTTG AGGCGGCCAT TCAGGCTGTT CGCAAGGGGG CTTACGATTT TCTGCCCAAG
CCCTGCAAGC TGTTTGAGAT TTCTGCTGCA TTAAAAAGAG TTGCTGAAAA ACGGACTCTC
ACCAATAAAG CGATTGCTCT GGAAACGCGA TTGAAGGCGG TCGAAGGAGC ACCAGATATC
ATTGGCAAAA CGCCATCGAT GCAGCGTGTC AAACGGATGA TCGAAAAGAT TGCTCCGACA
GATTCGGCTG TGTTAATTCT GGGTGAGACC GGGACTGGCA AGGAACTGGT GGCTCGTCGG
GTGCATGAGT TAAGCCATCG TGCTCAGATG CCGTTTGTGG CTGTGAATTG TGGAGCGCTC
CCGGATAACC TGGTGGAGAG CGAACTGTTC GGCCACCGGA AAGGTGCCTT CACCGGGGCG
GATACACCTC GGAAAGGACT CATCGAGGTG GCGAACGGAG GGACGCTCTT CCTGGATGAA
CTGGGAGAAC TCGATAAGTC GATGCAGGTC AAGCTGCTGA GATTTTTAGA GTCTGGTGAA
GTTCGTCGTG TGGGTGAGAA CGAAGCTTTT CATGTGGATG TTCGCATCGT CTGTGCAACA
AATCGTGACC TCGAATCGAT GGTTCGCGAA GGAGCTTTTC GGGAAGATTT GTTCTTTCGT
GTGAATACGT TCGAGATTCG GCTCCCTCCG CTGCGCGAAC GGAAAGAAGA TCTTCCAGAT
GTGTCTCGCA ATCTGATTGC CAGACATCTC AAACGGCGTG ACGTGCCACC CGAGATTCTG
GCACCAGAGA CGATCGAAGC ATTGCAATCA CACGACTGGA GTGGAAACAT TCGTGAACTC
GCCAATGCAT TGGAGCATGC GGTGATTCTG GCTGACGGTG GAGTGATCCT TCCCGAGCAT
CTTCCCGGCG CGATCACCCG TCAGCGATCT GCCGTTCTGA CTGGCAATAA GGCAGTAGAA
GCTGCGTTTT CCAGCGGTTC TCCCAAGACC TTGCGGGAGA TTGAAATGGA AGTCATCTAT
CAGGTTCTGG AGAAGCACAA AGGTGACAAA GTCAAGGTGG CTGCCGAGTT GGGCATAGCT
CTTAAGACGT TATACAACAA GCTCAACGGT GATCAGACTC GTGCTGCCAG TTGA
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| Protein sequence | MMPLEGQGES PLGTMTSNKL RVLFVDDEAA IRSVMKIELP RMGHDVTFCE DGESALKVLE
NHTFDAAIVD LRMPGISGWD VIDHIKKVSP ETEVIISTGH GDLEAAIQAV RKGAYDFLPK
PCKLFEISAA LKRVAEKRTL TNKAIALETR LKAVEGAPDI IGKTPSMQRV KRMIEKIAPT
DSAVLILGET GTGKELVARR VHELSHRAQM PFVAVNCGAL PDNLVESELF GHRKGAFTGA
DTPRKGLIEV ANGGTLFLDE LGELDKSMQV KLLRFLESGE VRRVGENEAF HVDVRIVCAT
NRDLESMVRE GAFREDLFFR VNTFEIRLPP LRERKEDLPD VSRNLIARHL KRRDVPPEIL
APETIEALQS HDWSGNIREL ANALEHAVIL ADGGVILPEH LPGAITRQRS AVLTGNKAVE
AAFSSGSPKT LREIEMEVIY QVLEKHKGDK VKVAAELGIA LKTLYNKLNG DQTRAAS
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