| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3160 |
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| Symbol | |
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| ID | 5540658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4101057 |
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| End bp | 4101944 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640895281 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001433232 |
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| Protein GI | 156743103 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.272458 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAAGAT GTCGCTGTGC TGCTGGCGCC GGGTTTTCTG GTGGCTTGCG ATGCAACAAC
CAGCAGAACG GCTCATATCT GAAAGTCAAG GTCATGATTC GCGGTCACGG TCGGATACTT
CTGGTTGAAG ACGATCATGC GGCGCTGATG TCGCTCCGCC GTATTCTGGA AAGTGCAGGC
TATCAGGTTA CGGCAGTCGC CGATGGTGAA ACCGCCTGTA AACATCTGGA GCAGATTGGC
GGCGGTGTGT ATGATGTGGT GCTCACCGAT CTGCGGATGA ACACGATCAA TGGACTGGAT
GTGTTGCGCG CGGCGCGGCG GTTGCCGAGT CCGCCGGAAG TGGTGTTGCT GACGGGCTAC
GGGACATTGG GAACGGCAAT TGAGGCGCTG CGTGCTGGAG TGTACGATTA TTTGCTCAAA
CCCTGCAAAC CAGAAGAACT CCTGCATACC ATCGAAGGAG CAGTGCAGCG CCGGTACGAC
TCGGCGCTCC AACTCGCAGC CCTGCGCGAG CAGGCGCGTG GCGCCGTCTC AGAAGACGAT
CGTTTTCTGA TTGAGCAGAT CCGCTACATG CGCGTGGGTG AACTGCTGAT TGATCGCTTC
AATCGACGCA TTATCTTCAG AAATCGCCTG GTTCAGGCGA CGCCGACCGA GTATGAGTTA
CTGAGTTGCC TGGCAGAAGC GCGTGGTCAG GTTCTTCGCT TTCGCGACAT TGTGCAGCGC
GTCTATCTCG ATGCTCATGC CATTTCCGAT GATGAAGCCC AACAACTGCT CAAAACCCAT
ATTCACAATT TGCGGCATAA GATCGATCCG GCGTATATTG TCAATGTCCG CGGCGTCGGG
TATCGGTTGA TTGATCCCCG AGCATTGCGC CATCGTCTTG AAGAGTGA
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| Protein sequence | MVRCRCAAGA GFSGGLRCNN QQNGSYLKVK VMIRGHGRIL LVEDDHAALM SLRRILESAG
YQVTAVADGE TACKHLEQIG GGVYDVVLTD LRMNTINGLD VLRAARRLPS PPEVVLLTGY
GTLGTAIEAL RAGVYDYLLK PCKPEELLHT IEGAVQRRYD SALQLAALRE QARGAVSEDD
RFLIEQIRYM RVGELLIDRF NRRIIFRNRL VQATPTEYEL LSCLAEARGQ VLRFRDIVQR
VYLDAHAISD DEAQQLLKTH IHNLRHKIDP AYIVNVRGVG YRLIDPRALR HRLEE
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