Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4540 |
Symbol | |
ID | 3712578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5115368 |
End bp | 5116696 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | two component, sigma-54 specific, Fis family transcriptional regulator |
Protein accession | YP_350268 |
Protein GI | 77460761 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.203781 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.155775 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAACG ACCTCAGTGT ATTGATCGTC GAAGACGACC CCCATGTCCT GCTCGGCTGC CAGCAGGCGC TGACCCTCGA AGACATCCCC TGCATCGGCG TCGGCAGTGG CGAAGAAGCG CTGGAGCAGG TCGGCGACAA CTTCGCCGGG ATCGTCATCA GCGACATTCG CCTGCCGGGC ATCGACGGCC TGGAACTGCT GACCCGGCTC AAGCAACGCG ACCGCAGCCT GCCGGTGGTG CTGATCACCG GCCACGGCGA CATCTCCATG GCCGTCGGCG CGATGCAGAA AGGCGCCTAC GACTTCATGG AAAAACCGTT CTCCCCTGAA CGACTGGTGG ACGTGGCCCG TCGTGCGCTG GAGCAACGCA GCCTCAATCG CGAAGTTTCG TCCCTGCGCC GGCAACTGGC CGAACGCGAT TCCCTTGAAG GGCGGATCAT CGGGCGTTCG CCGGCCATGC AGAACCTGCG CGAACTGATC GCCAACGTCG CCGACACCTC GGCCAACGTA TTGATCGAAG GCGAGACCGG CACCGGCAAG GAACTGGTCG CCCGCTGCCT GCACGATTTC AGCCGACGCC ACACCAAACA GTTCGTCGCG CTGAACTGCG GCGGTCTGCC GGAAAACCTG TTCGAAAGCG AAATCTTCGG TCACGAAGCC AACGCCTTCA CCGGCGCCGG CAAACGGCGG ATCGGCAAGA TCGAGCACGC CGACGGCGGC ACGCTGTTCC TCGACGAAGT GGAAAGCATG CCGCTGCCGT TGCAGATCAA ACTGCTGCGG GTGTTGCAGG AGCGCACCCT CGAACGCCTC GGCTCGAACC AGAGCGTGGC GGTGGATTGC CGGGTGATTG CGGCCACCAA GTCCGACCTC GACGAGTCGA GCAAGGCCGG GGAATTTCGC AGTGACTTGT ACTACCGCCT CAACGTGGTG ACGCTGGAAC TGCCGCCCCT GCGCGAACGC CGCGAAGACA TCCTGCAACT GTTCGAACAC TTCACCCAGC AATCGGCCCT GCGTTTCGAC CGGGCGCTGC CGGAGCTGGA CAACCAGACG TTGTCGAGCC TGATGAGCCA CGACTGGCCG GGCAACGTGC GCGAACTGCG CAACGTCGCC GAGCGTTTTG CCCTCGGTTT GCCGGCGTTC AAGAAAACCG GCGCGGGCAG CGCAGGTCAG GGCCTGGCGT TCGCCGAAGC GGTGGAAGCG TTCGAACGCA ACCTGCTCAG CGACGCCCTG CAACGCAGCG GCGGCAACCT GACCCAGGCC AGCCTGGAAC TGGGCATGGC CAAGACCACG CTGTTCGACA AAGTGAAAAA ATACGGCCTG AGCCATTAA
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Protein sequence | MNNDLSVLIV EDDPHVLLGC QQALTLEDIP CIGVGSGEEA LEQVGDNFAG IVISDIRLPG IDGLELLTRL KQRDRSLPVV LITGHGDISM AVGAMQKGAY DFMEKPFSPE RLVDVARRAL EQRSLNREVS SLRRQLAERD SLEGRIIGRS PAMQNLRELI ANVADTSANV LIEGETGTGK ELVARCLHDF SRRHTKQFVA LNCGGLPENL FESEIFGHEA NAFTGAGKRR IGKIEHADGG TLFLDEVESM PLPLQIKLLR VLQERTLERL GSNQSVAVDC RVIAATKSDL DESSKAGEFR SDLYYRLNVV TLELPPLRER REDILQLFEH FTQQSALRFD RALPELDNQT LSSLMSHDWP GNVRELRNVA ERFALGLPAF KKTGAGSAGQ GLAFAEAVEA FERNLLSDAL QRSGGNLTQA SLELGMAKTT LFDKVKKYGL SH
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