| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1577 |
|---|
| Symbol | |
|---|
| ID | 8136908 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 1837939 |
|---|
| End bp | 1839315 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644869190 |
|---|
| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
|---|
| Protein accession | YP_003021390 |
|---|
| Protein GI | 253700201 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 100 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAGA TACTGATAAT AGACGACGAA GCCTTCATCT GCGAGAACGT GCAGCGCATC
CTTTCCGGCG AGGGGTTCCA GGTTTGCGCC GCCGGTTCGG GGAAGGAGGC ACGCGACATC
GTGGCCGGCG AAGAGATCGA TCTGGCCCTA CTCGACCTGA ACTTAGGCTC CGAGGACGGC
ATCGAGATCC TCAAATCGCT GAAAGAGACG GACCCGGAGC TGCTGGTGAT CATCATCACC
GGGTACGGGT CGGTGGAAAG CGCCGTCGAA TCCCTGCAAC TGGGCGCCTT CCACTACATG
AAGAAGCCCT TCAAGGCCGA CGCGCTCAGG CTGATCGTCA AGCTCGCCCT GAAGACACAG
ACCTTGAAGC GCGAGGTCCG CAAACTCAAG CGCGACAACT CCCCCCTACC CGGGCGCTCC
CCCATAATCG GCAAGAGCGA GGCGTTCCAA GAGATGGCGG CTCAGGTGCG GGAGATCGCC
CGCATTCCCT CCACCGTGCT CATCACCGGC GAGTCCGGTA CCGGCAAGGA GGTCGTGGCC
CGCGCCATCC ACGACCTCTC CGACCGCAAG GAACACGCCT TCATCGCCAT CAACTGCGCC
TCCATCCCGG CCCCCCTTTT GGAGAGCGAG CTCTTCGGGC ACGAGAAGGG GGCCTTCACC
GGCGCCACCG GACGCAAGAA GGGGCTTTTC GAGGAGGCGC ACCACGGCAC CATCTTCCTG
GACGAGATCG GGGAAATGGA CATGGCGATG CAGGTGAAGC TTTTGCGAGT GCTGCAGGAA
AGAACCATCA GGCGGGTGGG CGCAGTCAAG GACATCGAGA TAGACGCACG GGTCATAGCC
GCCACCAACC GCGACCTCGC CAAGCGGATC GAGGAGAAGA ATTTCCGCGA GGACCTCTTC
TACCGTCTCA ACGTGTTTCC CATCTACATC CCACCCCTGC GGGAGCGCCC CGCGGACATA
GCCGCCCTCG CTGCCTATTT CCTGGACAGC TTCAGCCGCT CCTTCGGCCG CGACTTCCGC
GACGTCTCGC CCGAGGCGGA GCAACTGATG GCGCAGTACG CCTGGCCCGG CAACGTCAGG
GAGTTGAGAA ACGTGATAGA ACGGATCTGC ATCATGCGCA GCGGCCCCAC CCTGCTCCCG
GAACATCTGC CGCAGGAGAT AAAGAGCAGC GTGGCGGCGC CCCCGTTGCC CGCCGAGATC
CCCATCACCG TCGATACCGA TCTCGGGCTC GAAGAGGCGG TCAGCGCCAT CGAAAAATCA
CTCATCCGGC AGGCCCTCCA GAAGACGGGT TGGAACGTGC TGCAGACAGC GGCCAACCTG
AAGATCCCCC GCGGCACCTT GCGCTATAAG ATGGAGAAGT ACGGCCTGAT GCAATAG
|
|---|
| Protein sequence | MEKILIIDDE AFICENVQRI LSGEGFQVCA AGSGKEARDI VAGEEIDLAL LDLNLGSEDG
IEILKSLKET DPELLVIIIT GYGSVESAVE SLQLGAFHYM KKPFKADALR LIVKLALKTQ
TLKREVRKLK RDNSPLPGRS PIIGKSEAFQ EMAAQVREIA RIPSTVLITG ESGTGKEVVA
RAIHDLSDRK EHAFIAINCA SIPAPLLESE LFGHEKGAFT GATGRKKGLF EEAHHGTIFL
DEIGEMDMAM QVKLLRVLQE RTIRRVGAVK DIEIDARVIA ATNRDLAKRI EEKNFREDLF
YRLNVFPIYI PPLRERPADI AALAAYFLDS FSRSFGRDFR DVSPEAEQLM AQYAWPGNVR
ELRNVIERIC IMRSGPTLLP EHLPQEIKSS VAAPPLPAEI PITVDTDLGL EEAVSAIEKS
LIRQALQKTG WNVLQTAANL KIPRGTLRYK MEKYGLMQ
|
|---|
| |