Gene Gbem_3413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3413 
Symbol 
ID6780275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp3928655 
End bp3930016 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content62% 
IMG OID642769407 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionYP_002140202 
Protein GI197119775 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGCAA AAATACTAGT CATAGACGAT GACAGTTCAT TAAGGCGCGT GCTCGAGTAC 
AACCTGCAGC AGGAGGGGTA CGACGTGTAC ACCGCTGCCG ACGGCGACGC CGGGTTGCAG
CTCTTCGCGG AGAGGTTGCC GGCCGTAGTC ATCACGGACC TGAAGATGCC GGGAAAGAGC
GGGTTCGAGG TTCTCTCCGC CATCAAGGAG AGCTCGCCTG CCACTGTGGT CATCGTGCTG
ACCGCATTTG GAGCCATCGA CACTGCGGTG GAGGCGATGA AGCTGGGGGC TTTCCATTAC
CTCACAAAGC CGTTCAACCG TGAGGAGCTG AAGGTCACGG TGCTGAAGGC GCTGCAACTG
CAGGGGCTTT CGGAAGAGAA CCGGCTGCTG AAGGAGGAAC TCTCCGGGCG CGCCGAGTTC
AAGAGCATCG TCGGCACCTC CCGTGCCATG GAAGGGGTTT TCTCGGTGGT GCGCAAGGTG
GCGGACACCG AGGCCACCGT CCTCATCACC GGCGAATCGG GAACCGGCAA GGAACTTGTG
GCGCGCGCCA TTCACTCCGG CAGCTCACGT CGCGGCGCCC CTTTTATCGC CGTCAACTGC
GCGGCCATTC CCAGGGACCT TTTGGAGAGC GAGCTCTTCG GCCATGTCAA GGGGGCCTTC
ACCGGGGCCA TTCGGGACAA AGAGGGGAAG TTTCAACTGG CCGACGGCGG CACCATCTTC
CTGGACGAGG TGGGGGACCT CCCTCTGGAA CTACAGCCCA AACTGCTGCG CGTCCTGCAG
GAGCGCGTGG TAGAACCCGT CGGCGGCACC TCTTTGCAGA AGATAGACCT GCGGGTGGTG
GCGGCGACGA ACGCGGATCT GGAGCGCTGG ATCGTGGAAG GGAAGTTCCG CGAGGATCTC
TACTATCGTC TCTCCGTGAT CCCGATCCAG CTCCCTCCTC TGAGGGAACG GGTGGAGGAT
GTGCCGCTTT TGCTGCGCTA CTTCTGCGCC AAGTTCGGGG CCGAAGGGGT GAGCTTCGAG
AAAGAGGCTC TGGAGAGGCT GCAGGCATAC GGCTGGCCGG GGAATGTGCG GGAACTGGAA
AACACCGTCG AGCGCCTGCT CATCATGCGG GAGAGCGACC GGATCGGTGC GGCCGAACTC
CCTGAGAAAA TATCGGCCAC CTCGTCCCCC GCCGAGGGGA GCGTGCTCAG GCTTCCGCCC
GGAGGCTATT CGCTGGAGCA ACTGGAGCGG GAGGTGGTGT TGGAGGCTCT GGAAAGGTGC
GACTGGAACC AGACCGCGGC CGCCCGCTTT CTGCGCATAC CGCGCCATAC CCTGATTTAC
AGAATGGAAA AATACAATAT AGTGCAACCT GGGAGAAAGT AA
 
Protein sequence
MPAKILVIDD DSSLRRVLEY NLQQEGYDVY TAADGDAGLQ LFAERLPAVV ITDLKMPGKS 
GFEVLSAIKE SSPATVVIVL TAFGAIDTAV EAMKLGAFHY LTKPFNREEL KVTVLKALQL
QGLSEENRLL KEELSGRAEF KSIVGTSRAM EGVFSVVRKV ADTEATVLIT GESGTGKELV
ARAIHSGSSR RGAPFIAVNC AAIPRDLLES ELFGHVKGAF TGAIRDKEGK FQLADGGTIF
LDEVGDLPLE LQPKLLRVLQ ERVVEPVGGT SLQKIDLRVV AATNADLERW IVEGKFREDL
YYRLSVIPIQ LPPLRERVED VPLLLRYFCA KFGAEGVSFE KEALERLQAY GWPGNVRELE
NTVERLLIMR ESDRIGAAEL PEKISATSSP AEGSVLRLPP GGYSLEQLER EVVLEALERC
DWNQTAAARF LRIPRHTLIY RMEKYNIVQP GRK