| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0965 |
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| Symbol | |
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| ID | 7970140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1062401 |
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| End bp | 1063789 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644791561 |
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| Product | putative two component, sigma54 specific, transcriptional regulator, Fis family |
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| Protein accession | YP_002942882 |
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| Protein GI | 239813972 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACGA CCGGCGCGCG CCTGCTGGTG GTCGACGACG ACCCGGACAT GCTGCGGCTG
CTCTCGATGC GGCTGAGTTC GGCCGGCTAC CAGGTCACGG CCGTGACCTC GGCCGAAACC
GCGCTCACGC AGCTCGAGAT CGAGCACCCG CAGCTGGTGC TCAGCGACGT GCGGCTGCCC
GGCCGCGACG GGCTCCAGCT GTTCGACGAG ATTCGCAAGC GCCATCCCTC GCTGCCGGTG
ATCCTGCTCA CCGCCCACGG CACCATTCCC GATGCGGTCG AGGCCACCGC GCGCGGCGTG
TTCACCTATC TCACCAAGCC CTACGACGGC CGCGAACTGC TCGACAAGAT CGCGCAGGCG
CTGGCGCTGG GCGCACCGGC CAGCACGCCC GCCAAGGCCG GCGACGAAAG CTGGCGCGCC
GAGATCGTGA GCCGCAGCAA CCGCATGTCC GAGCTGCTGG CCGAGGCGCG CATGGTCGCC
AAGTCGGACG CCTCGGTGCT GCTGCGCGGC GACAGCGGCG CCGGCAAGGA ACTGCTGGCG
CGCGCCATCC ACCGCGCCAG CGCGCGCGCC GACAAGCCTT TCGTGGCCGT CAATTGCGGC
GCCATCCCCG AGGCGCTGCT CGAATCCGAA CTGTTCGGCC ACATGAAGGG CGCCTTCACC
GACGCCCATG CCAACCACAA GGGCCTGTTC CAGCAGGCCG ACGGCGGCAC GCTGCTGCTC
GACGAAATCG GGGACATGCC GCCCGCCCTG CAGGTCAAGC TGCTGCGCGT GCTGCAGGAG
CGCGCGGTGC GCCCGCTGGG TGCCAGCCAG TCGATCGAGG TCGACGTGCG CATCATCTCG
GCCACCCACC GCGACCTGGA CGTGGCCATG GAAGCCGGCC AGTTCCGCGA AGACCTCTAT
TACCGGCTCA ACGTGGTCAC GCTCACGCTG CCGCCGCTGT CGGCCCGGCG CGAGGACATT
CCGCTTCTGG CCAACCACTT CCTGCAGAAG CTCTCGACCA AGTACGGCAA GCGGCTGTCC
GGCTTCGCGC CCGAGGCGCT CAAGGCGCTG GCCACCGCGG CCTGGCCCGG CAATGTGCGC
CAGCTCTACA ACGTGGTGGA ACAGGTCTGC GCGCTGTCGA GCTCGCCATT GATCCCGCTG
GCGCTGGTGC AGCGCGCGCT GCGCGTGCCC ACGGTCGAGG TCCAGACCTA TGCCGAGGCC
AAGCAGCGCT TCGAGCGCGA CTACCTCGTC GGGCTGCTCA AGCTGACCGA CGGCAACGTG
GCCGACGCCG CCCGGCTGGC CGACCGCAAC CGCACCGAGT TCTACCGCCT GCTGCAGAAG
CACGAACTCA CGCCGGGCCA CTTCAAGGCC GACGCTGTCG CTCCGGGCAA TGAGCCTGTC
GCCGACTAG
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| Protein sequence | MSTTGARLLV VDDDPDMLRL LSMRLSSAGY QVTAVTSAET ALTQLEIEHP QLVLSDVRLP
GRDGLQLFDE IRKRHPSLPV ILLTAHGTIP DAVEATARGV FTYLTKPYDG RELLDKIAQA
LALGAPASTP AKAGDESWRA EIVSRSNRMS ELLAEARMVA KSDASVLLRG DSGAGKELLA
RAIHRASARA DKPFVAVNCG AIPEALLESE LFGHMKGAFT DAHANHKGLF QQADGGTLLL
DEIGDMPPAL QVKLLRVLQE RAVRPLGASQ SIEVDVRIIS ATHRDLDVAM EAGQFREDLY
YRLNVVTLTL PPLSARREDI PLLANHFLQK LSTKYGKRLS GFAPEALKAL ATAAWPGNVR
QLYNVVEQVC ALSSSPLIPL ALVQRALRVP TVEVQTYAEA KQRFERDYLV GLLKLTDGNV
ADAARLADRN RTEFYRLLQK HELTPGHFKA DAVAPGNEPV AD
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