| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4161 |
|---|
| Symbol | |
|---|
| ID | 5211145 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 5210116 |
|---|
| End bp | 5210931 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640597750 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001278455 |
|---|
| Protein GI | 148658250 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAAC CGGCGAAAAT CCTGGTCGTT GACGATGAAC GTTCGGTGCG TATCATGCTC
GAAACGGCGC TCCGCGCCCA TGGATATCGG GTTGAGACGG CGGAGAACGG CGCTACTGCC
CGCATGCGCC TTGGCGGAGA AGAGTTCGAT CTGCTGTTGC TTGATCTGCA ATTAGGCGAT
GTCGATGGCA TTGAGATCCT GCGTGAAGTG AAGGAACAGT CGCCTGCAAC CGAGGTTATC
CTTCTGACAG CGCATGGTTC GATCAATAGT GCGATAGCAG CACTACGCTA TGGCGCTTTT
GATTATCTGC TCAAGCCGGC GCAGATCACG GAGATTCGTG AACGGGTTGA ACGCGCGCTG
CACCATCGTC GGGTCAATCT CCAGCGCACG GAACTGCTCC AGCGCATCAG TGAGAGCGCC
CGCGCGCTCG GTTTGATCGA GGGCGGCGGC AATCCGGTTC CTGCGCCGAC CGCTTCGAAC
GATTATCTGA CCGTGGGTCC GCTGGTGCTC GACTTGCGGC GTCACGCTGC GTATCTTGGC
GAACATACGC TCACGCTCAC CCGCACAGAG TTTGCATTGC TGACGGCGCT GGCGCAGAAT
CCCGATACGG CGCTCAGTTA CACGACCCTC TCCGAGGCGG TGTATGGACG CGCACAGGCG
GAAGAAGAGG CGCGTTCGCT GCTCCGCCCG CATATTGCAC GGCTCCGGCA GAAACTCGAT
GCAACCAGAA CGCCGGGCAT TGCGCTGGTC AGCATTCGCA GCATGGGGTA CATGCTGCAA
ACGGAGGATG CGCCAGCACC CGGATCGGCG CTCTGA
|
|---|
| Protein sequence | MKQPAKILVV DDERSVRIML ETALRAHGYR VETAENGATA RMRLGGEEFD LLLLDLQLGD
VDGIEILREV KEQSPATEVI LLTAHGSINS AIAALRYGAF DYLLKPAQIT EIRERVERAL
HHRRVNLQRT ELLQRISESA RALGLIEGGG NPVPAPTASN DYLTVGPLVL DLRRHAAYLG
EHTLTLTRTE FALLTALAQN PDTALSYTTL SEAVYGRAQA EEEARSLLRP HIARLRQKLD
ATRTPGIALV SIRSMGYMLQ TEDAPAPGSA L
|
|---|
| |