Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0583 |
Symbol | |
ID | 4808258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 714453 |
End bp | 715637 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640105997 |
Product | response regulator receiver protein |
Protein accession | YP_001037012 |
Protein GI | 125973102 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAGA TTCTTGTAAT AGACGATGAA AGTACCATTC TTCAGAACAT TAAATTTCTT CTGGAAATTG ACGGCAATGA AGTACTGACG GCTTCCAGCA GTACAGAAGG ACTCAGGATT TTTACAGAAA ACTGCAACTC CATCGATGTT GTCATTACCG ACATGAAAAT GCCAAAGCTG TCCGGCATGG ACATTCTAAG AGAAATTAAA AAAATCACGC CTCATATGGC CGTAATCATC CTTACGGGGC ACGGTGACTT GGACAATGCA ATTCTTGCAA TGAAAGAAGG AGCTTTTGAA TATCTCAGAA AACCGGTCAC AGCCCAGGAT TTATCAATAG CTATAAATAA CGCCATAAAC AGAAAGAAAC TTCTCATGGA AAATGAAAGA ATGACCCAGG AATTGCTGGC TCACAGAAAC TATTTACAAG GTCTTCATGA TTCTGCGGCA AAAATACTGC TCAACATGCT GCCAAAAAAC CTGCCGGATA TAGAGGGCTT CAACTTTGCC GTGGACTACA AAAGCTGTGA CGGTGTCGGC GGTGACATGT ACGATGTGTG TGATATAGGA GATTATATAT GTTTTTATGT TTTTGACGTA TCCCATCATG GCATTCTTGC CGCCGTTATT TCAATAATAA TAAAAAGTTT TCTTCAAAAT ATAGAATACA ACTATCGTCA GGGAATCAAC AAGAGAAGAT TTCCTGAAAT AGTTTTGGAT TTGAATCTGG AACTTCTGTC CAATACGGCG CAAAATGTGT TTGCCTCCTT GTTTTTAGGC TTTATTGATA AAAACAGCAA AAAGCTCTAT ACTGTATCGG CCGGCCATAT TCCACAGTAC ATAATGAAAG AAAACGGATT GGTGCCGTTG GAATCAACAG GACCTATTCT TGGAGTCTTT GAAGATTCAA CCTACAAATG TGCTGTAAAC CAGTTGGAAC CCGGAGACAA AGTATTGCTT TTCACAGACG GCATTATTGA AAGTCCTTCG GATTCAAGTG ATGAAAGTTC TGACGGCAAT CAAATTTTCG GCTATGAAAA CATGGTTAAA GTTCTCGAAA GCTGCAAAAA TGAACCTATT TCAACTACCA TTGATAAAAT AATGAAAGCC GTAAAAGATT TCTCGGGCAA TAGGTGTACT GATGACATGA CGATATTAGG TGTTGAAGTC TTAAAAGAGA ATTGA
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Protein sequence | MAKILVIDDE STILQNIKFL LEIDGNEVLT ASSSTEGLRI FTENCNSIDV VITDMKMPKL SGMDILREIK KITPHMAVII LTGHGDLDNA ILAMKEGAFE YLRKPVTAQD LSIAINNAIN RKKLLMENER MTQELLAHRN YLQGLHDSAA KILLNMLPKN LPDIEGFNFA VDYKSCDGVG GDMYDVCDIG DYICFYVFDV SHHGILAAVI SIIIKSFLQN IEYNYRQGIN KRRFPEIVLD LNLELLSNTA QNVFASLFLG FIDKNSKKLY TVSAGHIPQY IMKENGLVPL ESTGPILGVF EDSTYKCAVN QLEPGDKVLL FTDGIIESPS DSSDESSDGN QIFGYENMVK VLESCKNEPI STTIDKIMKA VKDFSGNRCT DDMTILGVEV LKEN
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