| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3458 |
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| Symbol | |
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| ID | 5735319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 4348577 |
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| End bp | 4351453 |
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| Gene Length | 2877 bp |
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| Protein Length | 958 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641280605 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001546222 |
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| Protein GI | 159899975 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGAGT TGCCATTACA GATCTTGGTG GTCGATGACG AGCCACGCTT AAGTGGTCAG
TTGCGGTTGT TATTGGAAGG GCAAGGCTAC AGCGTAACCA CGGCGGTTGG GGGTGCTGCG
GGCATTGCCA CGCTCCAAGC AAGCGACGTT GATGTCGTGC TGACTGATGT CACCATGCCT
GATGTTGATG GCTATACGGT GTTGCAATGG GTGCGCGAAA ATCGCCCAGA CATGCCGATT
ATCGTCATGA CTGGCTATGG TTCGCTGGAA AGTGCCACCC GTGCGTTGCG CTTAGGGGCT
TACGATTATA TTTTGAAGCC CTTTTCGTTG CCAACAGTGC AAGCAGCCTT GAATCGCGCT
TCGGCGGCGG TTTCCAAGCG GCGTGCCGAT GGTCAGCGCA CCGCCGAGCT TTCAGCAATT
GCGGCAATCG CCCGCCAAAT GGGGCGCTCG CTAGAGCCAG TGGCCATGGC CGATGCCACC
TTGAGCGCAA TTGCCGAATC AACTGGCGCT CAAGTGGCCT TGCTCTACAC CGCCGCTGAA
AATGGCATGC GCTGGCATTT ATGGCGACAC GTTGGCCTGA ATGAGCAACT TATTCAACAA
TTAGCCGAAT TATTTCCGCC CAGCCCGCTG AGCAAAGCCA CAATCGTTTG GGAAGATCGT
CCGCCTTGGT TGGCCGAGAT GCCCTACGAA TTGCTTCAAG GCCTGTGCAG CAGCGTTGGC
GGCAAAGTCG CTTGGGGCGC ATTGCCACTC GATGCCGGCC CGCAAGCGCT TATGTCGCTG
GTCTTGGTTG GCTCAAGTCG CAAAACTCAA GCTTGGTCGC CGCCATTTCT CATTTCGTTG
GGCAATGCCT TGAGCATGGC CTTGGTCAAT ACGCGCTTGT TCAATGCAGT GCGCGAGGAA
CGCGACCGCT TGCGCTTGCT CTATGGCATC AGCCGTGAGT TGGCTAGCTC GCTCGACCCC
GATCAATTAC TTTCGCGAAT TATTCAACAC ACGGTGGCAG CAGTTAACGC CGAACGTGGC
AGCATTATCA TTTCATCGCA AGATGGCCGC ACGACTCAGC GGATTGTTGC CCGTTATGGC
ATGGATCAAT CGGTGACTGA ATCGGTAGCG GCGGCCTTGT TGCAAGCCGG GCTTTCGGGC
TGGGTCTTTC GCCAACGTGA AGCCGCGCGA ATTGCCGATG TGCGCGTTGA TAAACGCTGG
GTCGAATTGC CCTCAACTCG TGGTCGGGTG CGTTCGGCCT TGGCAGTGCC CTTGTTGCGC
GAAGATCAAG TGCTTGGCGT GATGACCTTG ACGCACCCAC GGATCGATCA TTTTAGCGCT
GCCGACTTGG AATTGGTGCG TTCGGTTTCG GCTCAAGCAG CCGTCGCGAT TGAAAATGCC
AATTTGTTTG CTGAGCTAGA GCAGCGGGTA TTCGATCTTG AGGGCTTAAA TTCGACCAGC
CGCGAATTGG CTAGCTCGCT TGATCCATTG GAAGTAGCGC GAAAAGTGGC TTATCGCTGT
GCTGAAATGC TCGATGCCTC AATGGTAGCA TTGCTGCATG TCGATGATAA ACAAGGCACA
TTGCCCTTGG TTTCCTTGAT TAACGGCCAA GAACAGCCGT TATTGAAATT GGGGCCGATT
AGCGCTGCTC TGAATGATCC AGAACCTGTG CTATTAAACT CGGCTGGCAG CCAAATTGAA
CTGTTGGTGA ATAACGAAGA ACCCTTGGGC GAAAGCTGGA TTGGCGTGCC CTTGATGCTG
GGTGATGGGA TCAACGGCTT ATTGATTGCC GCCGATGAGC GCCGCGATGC CTTCGATGCT
TACGAACGAC AATTACTCAC AGCCTTGGCA GGCCAAGCAG CGGTAGCAAT GGAAAGTGCG
CGACTGTATG TCACTGCATC CGAGGAGCGA ACGCTCTTGG CAGCAGTGAT TGAATCGGTC
AGTGATGGCA TTTTGCTGAC TGATGAAGGC CAAATTGTGG TTGCTAACCC TGCCGCTGGC
GCAATTGCGG GCGTTTCTAA TAGTCGCTTG GTTAATCAAC CCTTGCTGAC CTTCTTCCCA
ATGTTGGCAA TGCTAGCTCG CCGCGAAGAT CACGAAAGCA AAGAAATTGC CATCAGCAAC
CGTTATTATG CGGTCAATAC TGCGCCATTG CAAAACAGTT CCTTGGGCGG CCAAGTGATC
GTCTTGCAGG ATATTACCCA TTTCAAAGAG CTAGACCAAA TCAAGAGCCG CTTTGTTTCG
ATGGTTTCGC ACGACCTCAA GTCGCCGCTG ACCGCAATTC AAGGCTATGC CCAATTGGTT
GCCGACGGGC ATATGGGCAC GGTCAACGAG ATGCAGCGTG ATGCCTTGCA AGCAGTTGTG
CGCAACACAG GCGCAATGAC TGCCTTGATC AGCGATTTGC TCGATTTGGG CAAAATCGAA
GCAGGGATTG GCATTTCGCC GCAAGAAACT GATTTGGCGG TGGTGTTGCG CGAAGTTATC
GACGAGCTGA AATTGCGGGC CAAAATGGGT CAAATCAGCG TCCAGCCTGA AATTCCGCCC
AGCTTGCCCT TGGTGGCTGA TCCCTCGCGG ATGCGCCAAG TGTTTACCAA CATTCTTTCG
AATGCAATTA AATACACGCC AAGCGGGGGG CAGGTCCAAA TTCGCGCCAA TAATGGCGAT
GCTAAAATGC ATGTGCAAAT TCAAGATAGC GGCTTAGGAA TTCCCGAAGA TTCCTTGCCG
CATATTTTTG AGCGCTTCTA TCGTGTCAAG CGGGATATTG ATTCGCCGAT TGAAGGGACT
GGCCTTGGCT TAGCAATTAC CAAAAGCATT GTCGATGAGC ATGGCGGCAC GATCGAGGTG
CAAAGTGTGA TCGGCGAGGG CACAACCTTC AATGTATATC TTCCCCAACA CAAATAA
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| Protein sequence | MNELPLQILV VDDEPRLSGQ LRLLLEGQGY SVTTAVGGAA GIATLQASDV DVVLTDVTMP
DVDGYTVLQW VRENRPDMPI IVMTGYGSLE SATRALRLGA YDYILKPFSL PTVQAALNRA
SAAVSKRRAD GQRTAELSAI AAIARQMGRS LEPVAMADAT LSAIAESTGA QVALLYTAAE
NGMRWHLWRH VGLNEQLIQQ LAELFPPSPL SKATIVWEDR PPWLAEMPYE LLQGLCSSVG
GKVAWGALPL DAGPQALMSL VLVGSSRKTQ AWSPPFLISL GNALSMALVN TRLFNAVREE
RDRLRLLYGI SRELASSLDP DQLLSRIIQH TVAAVNAERG SIIISSQDGR TTQRIVARYG
MDQSVTESVA AALLQAGLSG WVFRQREAAR IADVRVDKRW VELPSTRGRV RSALAVPLLR
EDQVLGVMTL THPRIDHFSA ADLELVRSVS AQAAVAIENA NLFAELEQRV FDLEGLNSTS
RELASSLDPL EVARKVAYRC AEMLDASMVA LLHVDDKQGT LPLVSLINGQ EQPLLKLGPI
SAALNDPEPV LLNSAGSQIE LLVNNEEPLG ESWIGVPLML GDGINGLLIA ADERRDAFDA
YERQLLTALA GQAAVAMESA RLYVTASEER TLLAAVIESV SDGILLTDEG QIVVANPAAG
AIAGVSNSRL VNQPLLTFFP MLAMLARRED HESKEIAISN RYYAVNTAPL QNSSLGGQVI
VLQDITHFKE LDQIKSRFVS MVSHDLKSPL TAIQGYAQLV ADGHMGTVNE MQRDALQAVV
RNTGAMTALI SDLLDLGKIE AGIGISPQET DLAVVLREVI DELKLRAKMG QISVQPEIPP
SLPLVADPSR MRQVFTNILS NAIKYTPSGG QVQIRANNGD AKMHVQIQDS GLGIPEDSLP
HIFERFYRVK RDIDSPIEGT GLGLAITKSI VDEHGGTIEV QSVIGEGTTF NVYLPQHK
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