Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4272 |
Symbol | |
ID | 3519601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 4503875 |
End bp | 4505248 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637286713 |
Product | sigma-54 dependent response regulator |
Protein accession | YP_270922 |
Protein GI | 71277923 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCTAA GCAACCAAAC AGTTACCAGT AATTCAGCCA AAATACTGAT AGTGGATGAT GACCCAAGTT TATTACGTTT ACTTGGTATT CGTTTATCTG CGGCAGGATA TGATGTTGAG TCTGCCGCCA ATGCAAAAAT TGCTTTAGGA AGATTACAAA ATTTTATTCC TCAAGTAGTT ATTAGTGATT TGCGTATGGA AGGCATGGAT GGCATGGCTT TATTCGAACA AATTAGAATA CAGCATCCTA ATATTCCTGT CGTCATTATG ACTGCTCATG GCACCATTCC AGATGCAATT AACGCCACTA AACAAGGTGT GTTTAGTTTT TTAACTAAAC CTTTTGAAAG CCAAGAGCTA CTTGATACCG TTGAACAAGC CATACGATTA CAGCCTTCAC AGAATGAGAA AACCGGAGAA ACAGAGCTAT GGCGAAATAA TATAATTAGC CGAAGTACTG TGATGACTTC ACTATTACAA CAAGCTAAAC AAGTAGCTAA CAGTGATTTT AGTGTACTTA TTCATAGCCA AAGCGGTACC GGTAAAGAGC TATTGGCAAA AGCAATTCAC CAAGCGAGTA ACAGGAAAAA TAAGGTATTC ACGGCAATCA ATTGTGCCGC TATACCTGAA CAACTCCTTG AGTCTGAATT GTTTGGTCAC ATTAAAGGGG CGTTTACTGG TGCAGAGCGA AATCACCAAG GTTTATTTCA AGCCACCAAT GGCGGTACTT TATTTTTAGA TGAAATTGGT GATATGCCAC TTAGCTTTCA GGTAAAACTT CTACGGGTTT TACAGGAACG AGAAGTCAGG CCGGTAGGTA GTACACAAGC GGTAAAGGTC GATGTTCGCA TCATTTCAGC AACCCATGTT AATTTAACCA ATGCCATTAA AGCCAATACC TTTAGAGAAG ATTTGTACTA CCGACTTAAT GTAGTTGAGT TGGAATTACC TACTTTGGCG CAACGACGAG AAGATATTCC ATTGTTGGTA CAATATTTCT TAAATCAAGC AGTTGCTCGA TCGAATGTCC CTATCAAAAG CATCAATCAA GAAGCCATGG AATTACTTAT TAGTGCCCCT TGGCCGGGTA ATATTAGACA GCTGCAAAAT GTTATAGAGC AAAGTATTGC GCTGTCTAGT GAAAGCATTA TCAGTGCAAA TTTAGTAAAA AATGCGCTGC GTGATGATTC AACTCAGTTT CCCTCTTTTC AGCAAGCACG TGATCATTTT GAGCGAGATT ACTTATCAAA ATTATTAAAA ATTACCGCAG GAAATGTATC ACAGGCAGCT CGAATTGCTC AACGTAACCG TACTGAGTTT TATAAGTTGT TAAATCGTCA TCATCTAGTC GCTGAATCAT ACCGAGAAGA GTAA
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Protein sequence | MSLSNQTVTS NSAKILIVDD DPSLLRLLGI RLSAAGYDVE SAANAKIALG RLQNFIPQVV ISDLRMEGMD GMALFEQIRI QHPNIPVVIM TAHGTIPDAI NATKQGVFSF LTKPFESQEL LDTVEQAIRL QPSQNEKTGE TELWRNNIIS RSTVMTSLLQ QAKQVANSDF SVLIHSQSGT GKELLAKAIH QASNRKNKVF TAINCAAIPE QLLESELFGH IKGAFTGAER NHQGLFQATN GGTLFLDEIG DMPLSFQVKL LRVLQEREVR PVGSTQAVKV DVRIISATHV NLTNAIKANT FREDLYYRLN VVELELPTLA QRREDIPLLV QYFLNQAVAR SNVPIKSINQ EAMELLISAP WPGNIRQLQN VIEQSIALSS ESIISANLVK NALRDDSTQF PSFQQARDHF ERDYLSKLLK ITAGNVSQAA RIAQRNRTEF YKLLNRHHLV AESYREE
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