Gene CPS_4272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_4272 
Symbol 
ID3519601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp4503875 
End bp4505248 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content39% 
IMG OID637286713 
Productsigma-54 dependent response regulator 
Protein accessionYP_270922 
Protein GI71277923 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTAA GCAACCAAAC AGTTACCAGT AATTCAGCCA AAATACTGAT AGTGGATGAT 
GACCCAAGTT TATTACGTTT ACTTGGTATT CGTTTATCTG CGGCAGGATA TGATGTTGAG
TCTGCCGCCA ATGCAAAAAT TGCTTTAGGA AGATTACAAA ATTTTATTCC TCAAGTAGTT
ATTAGTGATT TGCGTATGGA AGGCATGGAT GGCATGGCTT TATTCGAACA AATTAGAATA
CAGCATCCTA ATATTCCTGT CGTCATTATG ACTGCTCATG GCACCATTCC AGATGCAATT
AACGCCACTA AACAAGGTGT GTTTAGTTTT TTAACTAAAC CTTTTGAAAG CCAAGAGCTA
CTTGATACCG TTGAACAAGC CATACGATTA CAGCCTTCAC AGAATGAGAA AACCGGAGAA
ACAGAGCTAT GGCGAAATAA TATAATTAGC CGAAGTACTG TGATGACTTC ACTATTACAA
CAAGCTAAAC AAGTAGCTAA CAGTGATTTT AGTGTACTTA TTCATAGCCA AAGCGGTACC
GGTAAAGAGC TATTGGCAAA AGCAATTCAC CAAGCGAGTA ACAGGAAAAA TAAGGTATTC
ACGGCAATCA ATTGTGCCGC TATACCTGAA CAACTCCTTG AGTCTGAATT GTTTGGTCAC
ATTAAAGGGG CGTTTACTGG TGCAGAGCGA AATCACCAAG GTTTATTTCA AGCCACCAAT
GGCGGTACTT TATTTTTAGA TGAAATTGGT GATATGCCAC TTAGCTTTCA GGTAAAACTT
CTACGGGTTT TACAGGAACG AGAAGTCAGG CCGGTAGGTA GTACACAAGC GGTAAAGGTC
GATGTTCGCA TCATTTCAGC AACCCATGTT AATTTAACCA ATGCCATTAA AGCCAATACC
TTTAGAGAAG ATTTGTACTA CCGACTTAAT GTAGTTGAGT TGGAATTACC TACTTTGGCG
CAACGACGAG AAGATATTCC ATTGTTGGTA CAATATTTCT TAAATCAAGC AGTTGCTCGA
TCGAATGTCC CTATCAAAAG CATCAATCAA GAAGCCATGG AATTACTTAT TAGTGCCCCT
TGGCCGGGTA ATATTAGACA GCTGCAAAAT GTTATAGAGC AAAGTATTGC GCTGTCTAGT
GAAAGCATTA TCAGTGCAAA TTTAGTAAAA AATGCGCTGC GTGATGATTC AACTCAGTTT
CCCTCTTTTC AGCAAGCACG TGATCATTTT GAGCGAGATT ACTTATCAAA ATTATTAAAA
ATTACCGCAG GAAATGTATC ACAGGCAGCT CGAATTGCTC AACGTAACCG TACTGAGTTT
TATAAGTTGT TAAATCGTCA TCATCTAGTC GCTGAATCAT ACCGAGAAGA GTAA
 
Protein sequence
MSLSNQTVTS NSAKILIVDD DPSLLRLLGI RLSAAGYDVE SAANAKIALG RLQNFIPQVV 
ISDLRMEGMD GMALFEQIRI QHPNIPVVIM TAHGTIPDAI NATKQGVFSF LTKPFESQEL
LDTVEQAIRL QPSQNEKTGE TELWRNNIIS RSTVMTSLLQ QAKQVANSDF SVLIHSQSGT
GKELLAKAIH QASNRKNKVF TAINCAAIPE QLLESELFGH IKGAFTGAER NHQGLFQATN
GGTLFLDEIG DMPLSFQVKL LRVLQEREVR PVGSTQAVKV DVRIISATHV NLTNAIKANT
FREDLYYRLN VVELELPTLA QRREDIPLLV QYFLNQAVAR SNVPIKSINQ EAMELLISAP
WPGNIRQLQN VIEQSIALSS ESIISANLVK NALRDDSTQF PSFQQARDHF ERDYLSKLLK
ITAGNVSQAA RIAQRNRTEF YKLLNRHHLV AESYREE