| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3376 |
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| Symbol | |
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| ID | 4689228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3576545 |
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| End bp | 3577933 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639836390 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_983594 |
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| Protein GI | 121606265 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.193945 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAG CGCCCAACCC GGCAGCGCCC AGCCTGCTGG TCGTCGATGA CGACGCCGAC
ATGCTGCGCC TGCTGACCAT GCGGCTCACA GCGGCGGGCT ACCGCGTCAC GGCCGTCACC
TCGGCCGAGG CCGCGCTGAC CGAACTGCAG CTTCATCGGC CCCAGCTGGT GCTGAGCGAT
GTGCGCCTGC CCGGCAAGGA CGGGCTGGCG CTGTTCGATG ACATCCGCGC CCGCCATCCT
TCGCTGCCGG TGATCCTGCT GACCGCGCAC GGCACCATTC CCGATGCGGT CGAGGCCACC
GAGCGCGGCG TCTTCACCTA CCTGACCAAG CCGTTCGACG GCAAGGCGCT GGAGGGCAAG
ATTGCCGAAG CACTGTTGCT GAGCGCGCCA GTCAACCCGG CCCGGCAGGG CAGCCCTGAA
GCCTGGCAAA CCCGCATCAT CAGCCGCTCC AGCCGCATGG CCGAGGTCCT GGCCGAAGCG
CGCATGGTGG CCACATCCGA CGCCAGCGTG CTGCTGCGCG GCGAAAGCGG CACCGGCAAG
GAACTGCTGG CCCAGGCGAT TCACCAGGCC AGCGCGCGCG CCGCCAAGCC TTTCATCGCG
GTGAACTGCG GCGCCATTCC GGAGGCGCTG CTTGAATCCG AACTGTTCGG CCATGTCAAG
GGCGCCTTCA CCGACGCGGT CAGCAACCAC AAGGGGCTGT TCCAGGCGGC CGATGGCGGC
ACGCTGCTGC TCGACGAGAT CGGCGACATG CCGCCCGCGC TGCAGGTCAA GCTGCTGCGC
GTGCTGCAGG AGCACGAGGT CCGGCCGGTG GGCGCCAGCC AGTCGATTGC TGTCGATGTG
CGCATCATCT CGGCCACGCA CCGCGACCTG GACGCGGCCA TGGCGGCCGG GGACTTCCGC
GCCGACCTGT ACTACCGGCT CAATGTCGTG ACCCTGACGC TGCCGCCGCT GTCCGAACGC
CGCGAGGACA TCGCGCTGCT GGCCAACCAT TTCCTGGTCA CGCTGGCGGC CAAGTACGAC
AAGCGCCTGA GCAGCTTTGC CCCGGAAGCG CTCAAGGCGC TGACCACCGC CGCCTGGCCG
GGCAATGTGC GCCAGCTCTA CAACGTGGTC GAGCAGGTCT GCGCCCTCTC GACCACGCCG
CTGGTGCCGC TGGCGCTGGT GCAGCGCGCC CTGCGCTCGC CGAGCATCCA GGTGCTGACC
TTTGCCGAGG CCAAACAGCG TTTCGAGCGC GACTACCTGG TCGGCCTGCT CAAGCTCACC
GATGGCAACG TGGCCGACGC CGCCCGGCTG GCCGACCGCA ACCGCACCGA GTTTTACCGC
CTGATGCAAA AGCACGGCCT CACTCCGGGC CACTTCAAGG CCGACAGCAC ACAGCCTTCC
GCAGATTGA
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| Protein sequence | MSEAPNPAAP SLLVVDDDAD MLRLLTMRLT AAGYRVTAVT SAEAALTELQ LHRPQLVLSD
VRLPGKDGLA LFDDIRARHP SLPVILLTAH GTIPDAVEAT ERGVFTYLTK PFDGKALEGK
IAEALLLSAP VNPARQGSPE AWQTRIISRS SRMAEVLAEA RMVATSDASV LLRGESGTGK
ELLAQAIHQA SARAAKPFIA VNCGAIPEAL LESELFGHVK GAFTDAVSNH KGLFQAADGG
TLLLDEIGDM PPALQVKLLR VLQEHEVRPV GASQSIAVDV RIISATHRDL DAAMAAGDFR
ADLYYRLNVV TLTLPPLSER REDIALLANH FLVTLAAKYD KRLSSFAPEA LKALTTAAWP
GNVRQLYNVV EQVCALSTTP LVPLALVQRA LRSPSIQVLT FAEAKQRFER DYLVGLLKLT
DGNVADAARL ADRNRTEFYR LMQKHGLTPG HFKADSTQPS AD
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