| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1408 |
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| Symbol | |
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| ID | 5195423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1577237 |
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| End bp | 1577914 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640585873 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001266750 |
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| Protein GI | 148546648 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0248977 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGAGC TGTTACTGAT TGATGATGAC CAGGAACTGT GCGAGCTGCT CGGCAGCTGG
CTGACCCAGG AAGGGTTTTC CGTGCGTGCC TGCCACGATG GGCAGAGCGC ACGCCTGGCC
CTGGCCGAGC ATGCCCCTGC TGCCGTGGTA CTGGATGTGA TGTTGCCCGA CGGCAGTGGC
CTGGAGCTTC TCAAGCAGCT GCGCAGCGAG CATGCCGAGC TACCGGTGCT GATGCTGTCA
GCCCGCGGCG AGCCGCTGGA CCGCATTCTC GGCCTTGAAC TGGGTGCCGA CGACTACCTG
GCCAAACCCT GCGACCCGCG CGAGCTCACT GCCCGCCTGC GCGCGGTGCT GCGCCGCAGC
CACCCCACCG CCACAACCAG CCAGATGGAG CTGGGTGACC TGGTCTACAG CCCTGCGCGG
GGCGTGGCCA GCATCGATGG CCGCGAAATG ACCCTGACCC TGTCCGAAAG CCGTATTCTT
GAAGCGCTGC TGCGCCAGCC CGGCGAGCCG CTGGACAAAC AGGAACTGGC GCAGATCGGC
CTGGGCCGCA AGCTGACCCT GTACGACCGC AGCCTGGACA TGCATGTCAG CAACCTGCGC
AAGAAGATCG GCCCCCACGC CGATGGCCGG CCACGCATTG TGGCGTTGCG TAGCCGTGGC
TATTACTACT GCCTGTAA
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| Protein sequence | MSELLLIDDD QELCELLGSW LTQEGFSVRA CHDGQSARLA LAEHAPAAVV LDVMLPDGSG
LELLKQLRSE HAELPVLMLS ARGEPLDRIL GLELGADDYL AKPCDPRELT ARLRAVLRRS
HPTATTSQME LGDLVYSPAR GVASIDGREM TLTLSESRIL EALLRQPGEP LDKQELAQIG
LGRKLTLYDR SLDMHVSNLR KKIGPHADGR PRIVALRSRG YYYCL
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