More than 300 homologs were found in PanDaTox collection
for query gene Saro_3747 on replicon NC_009427
Organism: Novosphingobium aromaticivorans DSM 12444



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009427  Saro_3747  short-chain dehydrogenase/reductase SDR  100 
 
 
268 aa  545  1e-154  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_3291  short-chain dehydrogenase/reductase SDR  51.74 
 
 
265 aa  261  8e-69  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.185202 
 
 
-
 
NC_009511  Swit_3639  short-chain dehydrogenase/reductase SDR  48.84 
 
 
259 aa  229  4e-59  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.670645 
 
 
-
 
NC_009427  Saro_3736  short-chain dehydrogenase/reductase SDR  43.19 
 
 
259 aa  213  2.9999999999999995e-54  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A5492  short chain dehydrogenase  43.51 
 
 
263 aa  202  5e-51  Burkholderia sp. 383  Bacteria  normal  0.757142  normal  0.625296 
 
 
-
 
NC_007347  Reut_A1534  short chain dehydrogenase  43.13 
 
 
263 aa  196  3e-49  Ralstonia eutropha JMP134  Bacteria  normal  0.0157122  n/a   
 
 
-
 
NC_009511  Swit_3655  short-chain dehydrogenase/reductase SDR  46.56 
 
 
262 aa  183  2.0000000000000003e-45  Sphingomonas wittichii RW1  Bacteria  normal  0.381392  normal 
 
 
-
 
NC_013510  Tcur_2757  short-chain dehydrogenase/reductase SDR  35.8 
 
 
258 aa  168  9e-41  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00507501  n/a   
 
 
-
 
NC_009565  TBFG_13563  short chain dehydrogenase  35.16 
 
 
260 aa  166  4e-40  Mycobacterium tuberculosis F11  Bacteria  normal  decreased coverage  0.00000000268632 
 
 
-
 
NC_013441  Gbro_0924  short-chain dehydrogenase/reductase SDR  35.94 
 
 
260 aa  164  1.0000000000000001e-39  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_5228  short chain dehydrogenase  33.72 
 
 
261 aa  163  2.0000000000000002e-39  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.940368  normal  0.168178 
 
 
-
 
NC_009338  Mflv_1530  short chain dehydrogenase  32.56 
 
 
263 aa  155  6e-37  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5029  short chain dehydrogenase  34.5 
 
 
261 aa  151  1e-35  Mycobacterium sp. JLS  Bacteria  normal  0.30549  normal 
 
 
-
 
NC_008146  Mmcs_4646  short chain dehydrogenase  34.5 
 
 
261 aa  151  1e-35  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4734  short chain dehydrogenase  34.5 
 
 
261 aa  151  1e-35  Mycobacterium sp. KMS  Bacteria  normal  0.332046  normal 
 
 
-
 
NC_014158  Tpau_3600  short-chain dehydrogenase/reductase SDR  32.81 
 
 
258 aa  136  4e-31  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.899503  n/a   
 
 
-
 
NC_013922  Nmag_2910  short-chain dehydrogenase/reductase SDR  37.8 
 
 
251 aa  135  9.999999999999999e-31  Natrialba magadii ATCC 43099  Archaea  normal  0.640216  n/a   
 
 
-
 
NC_007492  Pfl01_3419  short chain dehydrogenase  32.93 
 
 
255 aa  130  3e-29  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.689572  normal 
 
 
-
 
NC_013743  Htur_0514  short-chain dehydrogenase/reductase SDR  34.39 
 
 
252 aa  130  3e-29  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_008686  Pden_1255  3-ketoacyl-(acyl-carrier-protein) reductase  35.52 
 
 
247 aa  127  2.0000000000000002e-28  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_2614  short-chain dehydrogenase/reductase SDR  34.38 
 
 
257 aa  125  6e-28  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.042976  n/a   
 
 
-
 
NC_004578  PSPTO_2723  oxidoreductase, short-chain dehydrogenase/reductase family  32.55 
 
 
255 aa  125  8.000000000000001e-28  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.849254  n/a   
 
 
-
 
NC_009636  Smed_2171  short-chain dehydrogenase/reductase SDR  36.23 
 
 
253 aa  124  1e-27  Sinorhizobium medicae WSM419  Bacteria  normal  0.0299033  normal 
 
 
-
 
NC_008740  Maqu_2200  short chain dehydrogenase  32.93 
 
 
256 aa  124  1e-27  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_2636  short chain dehydrogenase  33.85 
 
 
258 aa  123  2e-27  Salinispora tropica CNB-440  Bacteria  normal  0.842689  normal  0.311906 
 
 
-
 
NC_010725  Mpop_0259  short-chain dehydrogenase/reductase SDR  37.21 
 
 
249 aa  124  2e-27  Methylobacterium populi BJ001  Bacteria  normal  normal  0.519285 
 
 
-
 
NC_010483  TRQ2_1110  3-oxoacyl-(acyl-carrier-protein) reductase  35.29 
 
 
246 aa  124  2e-27  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B4775  NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR  37.22 
 
 
249 aa  123  3e-27  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1438  3-oxoacyl-(acyl-carrier-protein) reductase  33.86 
 
 
245 aa  123  3e-27  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_4933  short-chain dehydrogenase/reductase SDR  36.58 
 
 
249 aa  122  4e-27  Burkholderia ambifaria MC40-6  Bacteria  normal  0.504822  normal 
 
 
-
 
NC_007005  Psyr_2456  short chain dehydrogenase  32.13 
 
 
255 aa  122  7e-27  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  hitchhiker  0.00716886 
 
 
-
 
NC_002947  PP_3926  short chain dehydrogenase  31.52 
 
 
255 aa  122  8e-27  Pseudomonas putida KT2440  Bacteria  normal  0.411324  normal  0.0487597 
 
 
-
 
NC_012918  GM21_2843  short-chain dehydrogenase/reductase SDR  34.47 
 
 
255 aa  122  8e-27  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009512  Pput_1909  short chain dehydrogenase  31.52 
 
 
255 aa  122  9e-27  Pseudomonas putida F1  Bacteria  normal  0.569755  normal 
 
 
-
 
NC_009486  Tpet_1020  3-oxoacyl-(acyl-carrier-protein) reductase  34.9 
 
 
246 aa  122  9e-27  Thermotoga petrophila RKU-1  Bacteria  normal  0.0122832  n/a   
 
 
-
 
NC_009439  Pmen_2074  short chain dehydrogenase  32.13 
 
 
255 aa  121  9.999999999999999e-27  Pseudomonas mendocina ymp  Bacteria  normal  0.0334632  normal  0.0500399 
 
 
-
 
NC_010501  PputW619_3215  short chain dehydrogenase  31.56 
 
 
255 aa  121  9.999999999999999e-27  Pseudomonas putida W619  Bacteria  normal  normal  0.57556 
 
 
-
 
NC_009485  BBta_0940  putative short-chain dehydrogenase  37.07 
 
 
266 aa  121  9.999999999999999e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_5565  short-chain dehydrogenase/reductase SDR  34.4 
 
 
281 aa  121  9.999999999999999e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_3817  3-oxoacyl-(acyl-carrier-protein) reductase  36.22 
 
 
247 aa  121  9.999999999999999e-27  Desulfitobacterium hafniense DCB-2  Bacteria  unclonable  0.00000000000000217117  n/a   
 
 
-
 
NC_009656  PSPA7_3468  short chain dehydrogenase  31.91 
 
 
255 aa  121  9.999999999999999e-27  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_40890  short chain dehydrogenase  31.91 
 
 
255 aa  121  9.999999999999999e-27  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2918  short-chain dehydrogenase/reductase SDR  35.48 
 
 
251 aa  121  9.999999999999999e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.154844 
 
 
-
 
NC_009954  Cmaq_1385  short-chain dehydrogenase/reductase SDR  35.71 
 
 
248 aa  120  1.9999999999999998e-26  Caldivirga maquilingensis IC-167  Archaea  normal  normal 
 
 
-
 
NC_013205  Aaci_0157  short-chain dehydrogenase/reductase SDR  37.01 
 
 
257 aa  120  1.9999999999999998e-26  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.0000174096  n/a   
 
 
-
 
NC_013205  Aaci_0156  short-chain dehydrogenase/reductase SDR  34.8 
 
 
253 aa  120  1.9999999999999998e-26  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  hitchhiker  0.000000282185  n/a   
 
 
-
 
NC_009338  Mflv_2469  short-chain dehydrogenase/reductase SDR  34.78 
 
 
249 aa  120  1.9999999999999998e-26  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0833  short-chain dehydrogenase/reductase SDR  35.94 
 
 
264 aa  120  3e-26  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.943755 
 
 
-
 
NC_013501  Rmar_2036  short-chain dehydrogenase/reductase SDR  35.25 
 
 
258 aa  120  3e-26  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_2161  short-chain dehydrogenase/reductase SDR  35.8 
 
 
263 aa  120  3e-26  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_10784  short chain dehydrogenase  36.47 
 
 
248 aa  120  3e-26  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_7068  SDR family dehydrogenase/reductase  32.28 
 
 
257 aa  120  3e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.894165 
 
 
-
 
NC_010322  PputGB1_3560  short chain dehydrogenase  31.56 
 
 
255 aa  120  3e-26  Pseudomonas putida GB-1  Bacteria  normal  0.457145  normal  0.310407 
 
 
-
 
NC_010676  Bphyt_6656  short-chain dehydrogenase/reductase SDR  31.73 
 
 
249 aa  119  3.9999999999999996e-26  Burkholderia phytofirmans PsJN  Bacteria  normal  0.790867  normal  0.270985 
 
 
-
 
NC_009953  Sare_2833  short chain dehydrogenase  34.24 
 
 
258 aa  119  3.9999999999999996e-26  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0164716 
 
 
-
 
NC_008391  Bamb_4414  short-chain dehydrogenase/reductase SDR  36.54 
 
 
249 aa  119  3.9999999999999996e-26  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.0262262 
 
 
-
 
NC_008726  Mvan_4185  short-chain dehydrogenase/reductase SDR  35.69 
 
 
248 aa  119  3.9999999999999996e-26  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2985  short-chain dehydrogenase/reductase SDR  34.63 
 
 
248 aa  119  4.9999999999999996e-26  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0207781  normal  0.0184598 
 
 
-
 
NC_008699  Noca_4372  short chain dehydrogenase  30.08 
 
 
279 aa  119  4.9999999999999996e-26  Nocardioides sp. JS614  Bacteria  normal  0.0247047  n/a   
 
 
-
 
NC_013730  Slin_1313  short-chain dehydrogenase/reductase SDR  38.62 
 
 
262 aa  119  6e-26  Spirosoma linguale DSM 74  Bacteria  normal  0.133593  normal  0.554394 
 
 
-
 
NC_008146  Mmcs_4577  short chain dehydrogenase  35.88 
 
 
253 aa  119  6e-26  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_4960  short chain dehydrogenase  35.88 
 
 
253 aa  119  6e-26  Mycobacterium sp. JLS  Bacteria  normal  0.599873  normal  0.483357 
 
 
-
 
NC_008705  Mkms_4665  short chain dehydrogenase  35.88 
 
 
253 aa  119  6e-26  Mycobacterium sp. KMS  Bacteria  normal  0.302874  normal 
 
 
-
 
NC_009524  PsycPRwf_1006  short chain dehydrogenase  34.14 
 
 
253 aa  119  6e-26  Psychrobacter sp. PRwf-1  Bacteria  normal  hitchhiker  0.0000281072 
 
 
-
 
NC_009338  Mflv_1601  short chain dehydrogenase  35.88 
 
 
253 aa  119  7e-26  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.786043  normal 
 
 
-
 
NC_011726  PCC8801_4265  3-oxoacyl-(acyl-carrier-protein) reductase  34.66 
 
 
250 aa  119  7e-26  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_4325  3-oxoacyl-(acyl-carrier-protein) reductase  34.66 
 
 
250 aa  119  7e-26  Cyanothece sp. PCC 8802  Bacteria  hitchhiker  0.00118279  normal  0.0328571 
 
 
-
 
NC_011831  Cagg_1951  3-ketoacyl-(acyl-carrier-protein) reductase  31.18 
 
 
247 aa  119  7.999999999999999e-26  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.00262535 
 
 
-
 
NC_010172  Mext_0292  short-chain dehydrogenase/reductase SDR  36.8 
 
 
262 aa  118  7.999999999999999e-26  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.469065 
 
 
-
 
NC_010505  Mrad2831_3001  short-chain dehydrogenase/reductase SDR  37.35 
 
 
249 aa  119  7.999999999999999e-26  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_5156  short chain dehydrogenase  35.11 
 
 
254 aa  118  7.999999999999999e-26  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.215894  normal 
 
 
-
 
NC_007204  Psyc_1871  3-oxoacyl-(acyl-carrier-protein) reductase  36.96 
 
 
263 aa  118  9.999999999999999e-26  Psychrobacter arcticus 273-4  Bacteria  normal  normal 
 
 
-
 
NC_010335  Caul_5136  short-chain dehydrogenase/reductase SDR  32.4 
 
 
254 aa  117  9.999999999999999e-26  Caulobacter sp. K31  Bacteria  normal  0.708802  normal 
 
 
-
 
NC_011729  PCC7424_0224  7-alpha-hydroxysteroid dehydrogenase  32.94 
 
 
255 aa  118  9.999999999999999e-26  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.717009 
 
 
-
 
NC_008148  Rxyl_0346  short-chain dehydrogenase/reductase SDR  34.44 
 
 
256 aa  117  9.999999999999999e-26  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0244456  n/a   
 
 
-
 
NC_008752  Aave_4512  short-chain dehydrogenase/reductase SDR  37.35 
 
 
255 aa  117  9.999999999999999e-26  Acidovorax citrulli AAC00-1  Bacteria  normal  0.588184  normal  0.748301 
 
 
-
 
NC_010511  M446_2746  short-chain dehydrogenase/reductase SDR  36.88 
 
 
249 aa  118  9.999999999999999e-26  Methylobacterium sp. 4-46  Bacteria  normal  0.458004  normal  0.197887 
 
 
-
 
NC_013501  Rmar_2450  3-oxoacyl-(acyl-carrier-protein) reductase  36.25 
 
 
249 aa  117  1.9999999999999998e-25  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc2351  3-ketoacyl-(acyl-carrier-protein) reductase  33.59 
 
 
252 aa  117  1.9999999999999998e-25  Ralstonia solanacearum GMI1000  Bacteria  normal  0.647461  normal 
 
 
-
 
NC_013131  Caci_3565  short-chain dehydrogenase/reductase SDR  32.42 
 
 
244 aa  117  1.9999999999999998e-25  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5464  NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR  34.78 
 
 
253 aa  117  1.9999999999999998e-25  Ralstonia eutropha JMP134  Bacteria  normal  0.852927  n/a   
 
 
-
 
NC_013501  Rmar_2206  short-chain dehydrogenase/reductase SDR  32.53 
 
 
266 aa  117  1.9999999999999998e-25  Rhodothermus marinus DSM 4252  Bacteria  normal  0.416605  n/a   
 
 
-
 
NC_013526  Tter_2517  short-chain dehydrogenase/reductase SDR  34.77 
 
 
257 aa  117  1.9999999999999998e-25  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.401645  n/a   
 
 
-
 
NC_007777  Francci3_1239  short-chain dehydrogenase/reductase SDR  33.59 
 
 
259 aa  117  1.9999999999999998e-25  Frankia sp. CcI3  Bacteria  normal  normal  0.198291 
 
 
-
 
NC_008009  Acid345_0265  3-oxoacyl-[acyl-carrier-protein] reductase  33.2 
 
 
248 aa  117  1.9999999999999998e-25  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.534726  normal 
 
 
-
 
NC_008345  Sfri_2071  short chain dehydrogenase  31.35 
 
 
256 aa  117  1.9999999999999998e-25  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_4525  short-chain dehydrogenase/reductase SDR  35.11 
 
 
265 aa  117  3e-25  Delftia acidovorans SPH-1  Bacteria  normal  0.576946  normal 
 
 
-
 
NC_009667  Oant_1287  3-ketoacyl-(acyl-carrier-protein) reductase  35.27 
 
 
252 aa  117  3e-25  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_9335  short-chain dehydrogenase/reductase SDR  33.73 
 
 
250 aa  117  3e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  0.728753  normal  0.802866 
 
 
-
 
NC_008390  Bamb_2219  short chain dehydrogenase  41.03 
 
 
169 aa  116  3e-25  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0104  short-chain dehydrogenase/reductase SDR  35.06 
 
 
246 aa  116  3.9999999999999997e-25  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.650868  normal 
 
 
-
 
NC_007434  BURPS1710b_1234  3-ketoacyl-(acyl-carrier-protein) reductase  33.21 
 
 
252 aa  116  3.9999999999999997e-25  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_1082  3-ketoacyl-(acyl-carrier-protein) reductase  33.21 
 
 
252 aa  116  3.9999999999999997e-25  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2119  short-chain dehydrogenase/reductase SDR  34.66 
 
 
257 aa  116  3.9999999999999997e-25  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6905  short-chain dehydrogenase/reductase SDR  34 
 
 
254 aa  116  3.9999999999999997e-25  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0258116  normal 
 
 
-
 
NC_011138  MADE_01007  short chain dehydrogenase  32.93 
 
 
253 aa  116  3.9999999999999997e-25  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.393478  n/a   
 
 
-
 
NC_008786  Veis_4104  short-chain dehydrogenase/reductase SDR  37.34 
 
 
255 aa  116  3.9999999999999997e-25  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.90531 
 
 
-
 
NC_006348  BMA0734  3-ketoacyl-(acyl-carrier-protein) reductase  33.21 
 
 
252 aa  115  5e-25  Burkholderia mallei ATCC 23344  Bacteria  normal  0.439886  n/a   
 
 
-
 
NC_008009  Acid345_0026  short-chain dehydrogenase/reductase SDR  34.92 
 
 
249 aa  115  5e-25  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.94443  normal 
 
 
-
 
NC_009080  BMA10247_1592  3-ketoacyl-(acyl-carrier-protein) reductase  33.21 
 
 
252 aa  115  5e-25  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>