Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_4325 |
Symbol | |
ID | 8393677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | - |
Start bp | 4469813 |
End bp | 4470565 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644982235 |
Product | 3-oxoacyl-(acyl-carrier-protein) reductase |
Protein accession | YP_003139946 |
Protein GI | 257062058 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00118279 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0328571 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGACA GTCAAGCGTT AAGTGAACAA GTAGCCATTG TAACAGGGGC ATCAAGGGGT ATTGGTAAGG CGATCGCCTT AGCCTTAGCA TCACAAGGGT TAAAAGTGGT GGTTAACTAT GCCCGTTCGA GTAGCGCAGC CGAAGAACTT GTACAGGCTA TTATTAATAG TGGAGGAGAG GCGATCGCGG TTCAAGGAGA TGTCTCAAAA ACCGAAGAGG TAGACACTTT AATTCAAACA ACTTTGGATA AATTTGGGCG CATTGATGTA TTAGTCAATA ATGCCGGAAT TACCCGCGAT ACCCTTTTAA TGCGGATGAA ACTTGAGCAG TGGCAAGAAG TCATTGATCT CAATTTAACC GGAGTATTTC TGTGTGTTAA AGCCGTCACT AAAACCATGT TAAAACAGAA ATCAGGGCGT ATTATTAATA TTACTTCAGT TTCGGGATTA ATGGGTAATC CAGGTCAGGC TAATTATAGC GCGGCTAAAG CAGGGGTGAT CGGATTAACT AAGACCGTTG CTAAAGAATT AGCCAGTCGG GGAGTGACGG TTAATGCGGT TGCACCAGGC TTTATTACAA CTGATATGAC TAGCGATATT AAATCAGAAG AAATCATCAA ATTTATTCCT CTCGGACGCT ATGGAATGCC CGAAGAAGTC GCCGGAATGG TGCGATTTTT AGCCACAGAT CCCGCCGCTT CTTATATTAC CGGACAAGTG TTTAATGTCG ATGGTGGCAT GGTAATGGCT TAA
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Protein sequence | MADSQALSEQ VAIVTGASRG IGKAIALALA SQGLKVVVNY ARSSSAAEEL VQAIINSGGE AIAVQGDVSK TEEVDTLIQT TLDKFGRIDV LVNNAGITRD TLLMRMKLEQ WQEVIDLNLT GVFLCVKAVT KTMLKQKSGR IINITSVSGL MGNPGQANYS AAKAGVIGLT KTVAKELASR GVTVNAVAPG FITTDMTSDI KSEEIIKFIP LGRYGMPEEV AGMVRFLATD PAASYITGQV FNVDGGMVMA
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