Gene Tpau_3600 details

Gene Information

• Locus tag: Tpau_3600
• ID: 9157779
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 3712395
• End bp: 3713171
• Gene Length: 777 bp
• Protein Length: 258 aa
• Translation table: 11
• GC content: 69%
• Product: short-chain dehydrogenase/reductase SDR
• Protein accession: YP_003648517
• Protein GI: 296141274

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.899503
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGGGC TGGGCCTGGC TGAGAAGGTT GTCGTGATCG CCGGAGCGGG ACCCGCACTC 
GGCACCACCC TGGCGCAGCG GTTCGCGGCG GAAGGCGCCG AGGTCGTACT CGTCGCCCGA 
ACGGCGGAAC GACTCGAGGC CACCGCAGCG CAGATCGACG GTGCCGTCGC CATCACCGCC 
GACATCACCG ATGAGGTGTC GCTCGCCGCG CTCGCGGCGC AGGTGCGCGA GCGCTTCGGC 
CGCACCGATG CGCTGATCAA CAACGCCTTC ACCTATCCCG CCATGCAACG GCTGGTGAAG 
ACCGACCCCG CGCACATCCT GGAGAGCGTG AACCTGATGG CGCTCGGTGC GCTGCGCACG 
GTACTGGCGT TCCGGGAGGC CCTCGCGCAG GCGCAGGGCG CGGTGGTGAA CGTGAATTCG 
ATGGTGATCC GCCACTCCGA CCTACGCTAC GGCGGCTACA AAGCGGGAAA GACTGCACAG 
CTCGCGCTCG CGCAGTCGCT GGCCACCGAG CTCGGACCGC AGGGCATCCG GATCAATTCC 
GTGGTGCCCG GGTGGATCTG GGGCGACACC CTGCGCGCCT ACTTCGAGTA CCGGGCCTCC 
CAGGAGGGCG GCCCGAGCCT CGACGACCAG TACACCGAGG CCGCTGCGGG GTCCGATCTG 
AAAAGACTCC CCTCCGAGGA CGAGGTGGCC TCCGCCGTCC TGTTCCTCGC TTCTCCCGCC 
GCGTCCGGCA TCACCGGGCA GACGCTCGAC GTCAACTGCG GCGAATACCA CGCCTGA 

 

Protein sequence

MSGLGLAEKV VVIAGAGPAL GTTLAQRFAA EGAEVVLVAR TAERLEATAA QIDGAVAITA 
DITDEVSLAA LAAQVRERFG RTDALINNAF TYPAMQRLVK TDPAHILESV NLMALGALRT 
VLAFREALAQ AQGAVVNVNS MVIRHSDLRY GGYKAGKTAQ LALAQSLATE LGPQGIRINS 
VVPGWIWGDT LRAYFEYRAS QEGGPSLDDQ YTEAAAGSDL KRLPSEDEVA SAVLFLASPA 
ASGITGQTLD VNCGEYHA