| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2074 |
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| Symbol | |
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| ID | 5109808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2297259 |
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| End bp | 2298026 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640503318 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001187567 |
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| Protein GI | 146307102 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0334632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.0500399 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAGA CCCAACTGTT CGACCTCGAC GGCAAGATCG CCTTCGTCTC CGGCGCCAGC
CGCGGCATCG GTGAGGCCAT TGCCAAGCTG CTGGCCCAGC AAGGCGCTCA CGTGATCGTC
TCCAGCCGCA AGATCGAGGG CTGCCAGGCC GTAGCCGATG CCATCCTGGC CGAAGGCGGC
AAGGCCACCG CCATCGCCTG CCACATCGGC GAGATGGAAC AGATCTCCAG CGTCTTCGCG
CAGATCAGGG AACAGTTCGG TCGCCTCGAC ATCCTGGTCA ACAACGCCGC CACCAACCCG
CAGTTCTGCA ACGTGCTGGA CACCGACCTG GGCGCCTTCC AGAAGACCGT GGACGTGAAC
ATCCGCGGCT ACTACTTCAT GTCCATCGAA GGCGGCAAGC TGATGAAGGA GAACGGCGGC
GGCTCGATCA TCAACGTTGC CTCGATCAAC GGCGTCAGCC CCGGCGAGTT CCAGGGCATC
TACTCGGTGA CCAAGGCGGC GGTGATCAGC ATGACCAAGG TGTTCGCCAA GGAATGCGCG
CAGTTCGGCA TTCGCTGCAA TGCCCTGCTG CCGGGCCTGA CCGACACCAA GTTCGCCTCG
GCGCTGACCA AGAACGACGC CATCCTCAAG CATGCGCTGC AGCGCATTCC GCTCAAGCGC
GTGGCCGATC CCAGCGAAAT GGCCGGCGCG GTGCTGTACC TGGCCAGCGA AGCGTCCAGC
TACACCACCG GCGTGGCGCT GAACGTGGAC GGCGGCTTCC TCTCCTGA
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| Protein sequence | MSKTQLFDLD GKIAFVSGAS RGIGEAIAKL LAQQGAHVIV SSRKIEGCQA VADAILAEGG
KATAIACHIG EMEQISSVFA QIREQFGRLD ILVNNAATNP QFCNVLDTDL GAFQKTVDVN
IRGYYFMSIE GGKLMKENGG GSIINVASIN GVSPGEFQGI YSVTKAAVIS MTKVFAKECA
QFGIRCNALL PGLTDTKFAS ALTKNDAILK HALQRIPLKR VADPSEMAGA VLYLASEASS
YTTGVALNVD GGFLS
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